MSH4 ORF clone FXC09470

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Flexi ORF Clone FXC09470

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Clone info.

Species

human

Clone Name

pF1KB8501 Sequence (with vector) Restriction Map

Product ID

FXC09470

HaloTag Clone PID

FHC09470

ORF Sequence

DNA sequence (2808 bp)
Protein sequence (936 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB528458]

Gene

KIBB8501

Symbol

MSH4

Description

mutS homolog 4

Original Clone ID

cs01832

Features of the cloned ORF sequence

Description

Length: 2808 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 936 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS670.1 0 99.9 MSH4 CCDS58709.1 9.1e-29 27.0 MSH2 CCDS1834.1 9.7e-29 27.0 MSH2 CCDS34195.1 2.6e-22 26.2 MSH3 CCDS4720.1 3e-17 24.3 MSH5 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR007860 155 292 PF05188 DNA mismatch repair protein MutS IPR007696 307 631 PF05192 DNA mismatch repair protein MutS IPR007861 493 584 PF05190 DNA mismatch repair protein MutS IPR000432 635 870 PF00488 DNA mismatch repair protein MutS HMMSmart IPR007696 330 657 SM00533 DNA mismatch repair protein MutS IPR000432 673 866 SM00534 DNA mismatch repair protein MutS
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_002431 936 602105 99.9 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB8501 Download

>KIBB8501  2808 bp
ATGCTGAGGCCTGAGATCTCATCAACCTCGCCTTCTGCCCCGGCGGTTTCCCCGTCGTCG
GGAGAAACCCGCTCACCTCAGGGTCCCCGCTACAATTTCGGACTCCAGGAGACTCCACAG
AGCCGCCCTTCGGTCCAGGTGGTCTCTGCATCCACCTGTCCTGGCACGTCAGGAGCTGCG
GGCGACCGGAGCAGCAGCAGCAGCAGCCTTCCCTGCCCCGCGCCAAACTCCCGGCCAGCT
CAAGGTTCATACTTTGGAAACAAAAGAGCTTATGCAGAGAACACAGTTGCATCAAATTTT
ACTTTTGGTGCAAGCTCATCTTCTGCACGAGATACTAATTATCCTCAAACACTTAAAACT
CCATTGTCTACTGGAAATCCTCAGAGATCAGGTTATAAGAGCTGGACACCACAAGTGGGA
TATTCAGCTTCATCCTCATCTGCGATTTCTGCACACTCCCCATCAGTTATTGTAGCTGTT
GTAGAAGGGAGAGGACTTGCCAGAGGTGAAATAGGAATGGCAAGTATTGATTTAAAAAAC
CCCCAAATTATACTATCCCAGTTTGCAGACAACACAACATATGCAAAGGTGATCACTAAA
CTTAAAATTTTATCACCTTTGGAAATAATAATGTCAAATACTGCTTGTGCTGTGGGGAAT
TCCACCAAGTTGTTCACTCTGATCACAGAAAATTTCAAGAATGTTAATTTCACTACTATC
CAAAGGAAATACTTCAATGAAACAAAAGGATTAGAGTACATTGAACAGTTATGCATAGCA
GAATTCAGCACTGTCCTAATGGAGGTTCAGTCCAAGTATTACTGCCTTGCAGCTGTTGCA
GCTTTGTTAAAATATGTTGAATTTATTCAAAATTCAGTTTATGCACCAAAATCACTGAAG
ATTTGTTTCCAGGGTAGTGAACAGACAGCCATGATAGATTCATCATCAGCCCAAAACCTT
GAATTGTTAATTAATAATCAAGACTATAGGAATAATCACACTCTCTTTGGTGTTCTAAAT
TATACTAAGACTCCTGGAGGGAGTAGACGACTTCGTTCTAATATATTAGAGCCTCTAGTT
GATATTGAAACCGTTAACATGAGATTAGATTGTGTTCAAGAACTACTTCAAGATGAGGAA
CTATTTTTTGGACTTCAATCAGTTATATCAAGATTTCTTGATACAGAGCAGCTTCTTTCT
GTTTTAGTCCAAATTCCAAAGCAAGACACGGTCAATGCTGCTGAATCAAAGATAACAAAT
TTAATATACTTAAAACATACCTTGGAACTTGTGGATCCTTTAAAGATTGCTATGAAGAAC
TGTAACACACCTTTATTAAGAGCTTACTATGGTTCCTTGGAAGACAAGAGGTTTGGAATC
ATACTTGAAAAGATTAAAACAGTAATTAATGATGATGCAAGATACATGAAAGGATGCCTA
AACATGAGGACTCAGAAGTGCTATGCAGTGAGGTCTAACATAAATGAATTTCTTGACATA
GCAAGAAGAACATACACAGAGATTGTAGATGACATAGCAGGAATGATATCACAACTTGGA
GAAAAATACAGTCTTCCTTTAAGGACAAGTTTTAGCTCTGCTCGAGGATTTTTCATCCAG
ATGACTACAGATTGTATAGCCCTACCTAGTGATCAACTTCCTTCAGAATTTATTAAGATT
TCTAAAGTGAAAAATTCTTACAGCTTTACATCAGCAGATTTAATTAAAATGAATGAAAGA
TGCCAAGAATCTTTGAGAGAAATCTATCACATGACTTATATGATAGTGTGCAAACTGCTT
AGTGAGATTTATGAACATATTCATTGCTTATATAAACTATCTGACACTGTGTCAATGCTG
GATATGCTACTGTCATTTGCTCATGCCTGCACTCTTTCTGACTATGTTCGACCAGAATTT
ACTGATACTTTAGCAATCAAACAGGGATGGCATCCTATTCTTGAAAAAATATCTGCGGAA
AAACCTATTGCCAACAATACCTATGTTACAGAAGGGAGTAATTTTTTGATCATAACTGGA
CCAAACATGAGTGGAAAATCCACATATTTAAAACAGATTGCTCTTTGTCAGATTATGGCC
CAGATTGGATCATATGTTCCAGCAGAATATTCTTCCTTTAGAATTGCTAAACAGATTTTT
ACAAGAATTAGTACTGATGATGATATCGAAACAAATTCATCAACATTTATGAAAGAAATG
AAAGAGATAGCATATATTCTACATAATGCTAATGACAAATCGCTCATATTAATTGATGAA
CTTGGCAGAGGTACTAATACGGAAGAAGGTATTGGCATTTGTTATGCTGTTTGTGAATAT
CTACTGAGCTTAAAGGCATTTACACTGTTTGCTACACATTTCCTGGAACTATGCCATATT
GATGCCCTGTATCCTAATGTAGAAAACATGCATTTTGAAGTTCAACATGTAAAGAATACC
TCAAGAAATAAAGAAGCAATTTTGTATACCTACAAACTTTCTAAGGGACTCACAGAAGAG
AAAAATTATGGATTAAAAGCTGCAGAGGTGTCATCACTTCCACCATCAATTGTCTTGGAT
GCCAAGGAAATCACAACTCAAATTACGAGACAAATTTTGCAAAACCAAAGGAGTACCCCT
GAGATGGAAAGACAGAGAGCTGTGTACCATCTAGCCACTAGGCTTGTTCAAACTGCTCGA
AACTCTCAATTGGATCCAGACAGTTTACGAATATATTTAAGTAACCTCAAGAAGAAGTAC
AAAGAAGATTTTCCCAGGACTGAACAAGTTCCAGAAAAGACTGAAGAA

ORF Protein

Cloned ORF protein sequence for pF1KB8501 Download

>KIBB8501  936 aa
MLRPEISSTSPSAPAVSPSSGETRSPQGPRYNFGLQETPQSRPSVQVVSASTCPGTSGAA
GDRSSSSSSLPCPAPNSRPAQGSYFGNKRAYAENTVASNFTFGASSSSARDTNYPQTLKT
PLSTGNPQRSGYKSWTPQVGYSASSSSAISAHSPSVIVAVVEGRGLARGEIGMASIDLKN
PQIILSQFADNTTYAKVITKLKILSPLEIIMSNTACAVGNSTKLFTLITENFKNVNFTTI
QRKYFNETKGLEYIEQLCIAEFSTVLMEVQSKYYCLAAVAALLKYVEFIQNSVYAPKSLK
ICFQGSEQTAMIDSSSAQNLELLINNQDYRNNHTLFGVLNYTKTPGGSRRLRSNILEPLV
DIETVNMRLDCVQELLQDEELFFGLQSVISRFLDTEQLLSVLVQIPKQDTVNAAESKITN
LIYLKHTLELVDPLKIAMKNCNTPLLRAYYGSLEDKRFGIILEKIKTVINDDARYMKGCL
NMRTQKCYAVRSNINEFLDIARRTYTEIVDDIAGMISQLGEKYSLPLRTSFSSARGFFIQ
MTTDCIALPSDQLPSEFIKISKVKNSYSFTSADLIKMNERCQESLREIYHMTYMIVCKLL
SEIYEHIHCLYKLSDTVSMLDMLLSFAHACTLSDYVRPEFTDTLAIKQGWHPILEKISAE
KPIANNTYVTEGSNFLIITGPNMSGKSTYLKQIALCQIMAQIGSYVPAEYSSFRIAKQIF
TRISTDDDIETNSSTFMKEMKEIAYILHNANDKSLILIDELGRGTNTEEGIGICYAVCEY
LLSLKAFTLFATHFLELCHIDALYPNVENMHFEVQHVKNTSRNKEAILYTYKLSKGLTEE
KNYGLKAAEVSSLPPSIVLDAKEITTQITRQILQNQRSTPEMERQRAVYHLATRLVQTAR
NSQLDPDSLRIYLSNLKKKYKEDFPRTEQVPEKTEE

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB8501 Download

>pF1KB8501  5921 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGCTGAGGCCT
GAGATCTCATCAACCTCGCCTTCTGCCCCGGCGGTTTCCCCGTCGTCGGGAGAAACCCGC
TCACCTCAGGGTCCCCGCTACAATTTCGGACTCCAGGAGACTCCACAGAGCCGCCCTTCG
GTCCAGGTGGTCTCTGCATCCACCTGTCCTGGCACGTCAGGAGCTGCGGGCGACCGGAGC
AGCAGCAGCAGCAGCCTTCCCTGCCCCGCGCCAAACTCCCGGCCAGCTCAAGGTTCATAC
TTTGGAAACAAAAGAGCTTATGCAGAGAACACAGTTGCATCAAATTTTACTTTTGGTGCA
AGCTCATCTTCTGCACGAGATACTAATTATCCTCAAACACTTAAAACTCCATTGTCTACT
GGAAATCCTCAGAGATCAGGTTATAAGAGCTGGACACCACAAGTGGGATATTCAGCTTCA
TCCTCATCTGCGATTTCTGCACACTCCCCATCAGTTATTGTAGCTGTTGTAGAAGGGAGA
GGACTTGCCAGAGGTGAAATAGGAATGGCAAGTATTGATTTAAAAAACCCCCAAATTATA
CTATCCCAGTTTGCAGACAACACAACATATGCAAAGGTGATCACTAAACTTAAAATTTTA
TCACCTTTGGAAATAATAATGTCAAATACTGCTTGTGCTGTGGGGAATTCCACCAAGTTG
TTCACTCTGATCACAGAAAATTTCAAGAATGTTAATTTCACTACTATCCAAAGGAAATAC
TTCAATGAAACAAAAGGATTAGAGTACATTGAACAGTTATGCATAGCAGAATTCAGCACT
GTCCTAATGGAGGTTCAGTCCAAGTATTACTGCCTTGCAGCTGTTGCAGCTTTGTTAAAA
TATGTTGAATTTATTCAAAATTCAGTTTATGCACCAAAATCACTGAAGATTTGTTTCCAG
GGTAGTGAACAGACAGCCATGATAGATTCATCATCAGCCCAAAACCTTGAATTGTTAATT
AATAATCAAGACTATAGGAATAATCACACTCTCTTTGGTGTTCTAAATTATACTAAGACT
CCTGGAGGGAGTAGACGACTTCGTTCTAATATATTAGAGCCTCTAGTTGATATTGAAACC
GTTAACATGAGATTAGATTGTGTTCAAGAACTACTTCAAGATGAGGAACTATTTTTTGGA
CTTCAATCAGTTATATCAAGATTTCTTGATACAGAGCAGCTTCTTTCTGTTTTAGTCCAA
ATTCCAAAGCAAGACACGGTCAATGCTGCTGAATCAAAGATAACAAATTTAATATACTTA
AAACATACCTTGGAACTTGTGGATCCTTTAAAGATTGCTATGAAGAACTGTAACACACCT
TTATTAAGAGCTTACTATGGTTCCTTGGAAGACAAGAGGTTTGGAATCATACTTGAAAAG
ATTAAAACAGTAATTAATGATGATGCAAGATACATGAAAGGATGCCTAAACATGAGGACT
CAGAAGTGCTATGCAGTGAGGTCTAACATAAATGAATTTCTTGACATAGCAAGAAGAACA
TACACAGAGATTGTAGATGACATAGCAGGAATGATATCACAACTTGGAGAAAAATACAGT
CTTCCTTTAAGGACAAGTTTTAGCTCTGCTCGAGGATTTTTCATCCAGATGACTACAGAT
TGTATAGCCCTACCTAGTGATCAACTTCCTTCAGAATTTATTAAGATTTCTAAAGTGAAA
AATTCTTACAGCTTTACATCAGCAGATTTAATTAAAATGAATGAAAGATGCCAAGAATCT
TTGAGAGAAATCTATCACATGACTTATATGATAGTGTGCAAACTGCTTAGTGAGATTTAT
GAACATATTCATTGCTTATATAAACTATCTGACACTGTGTCAATGCTGGATATGCTACTG
TCATTTGCTCATGCCTGCACTCTTTCTGACTATGTTCGACCAGAATTTACTGATACTTTA
GCAATCAAACAGGGATGGCATCCTATTCTTGAAAAAATATCTGCGGAAAAACCTATTGCC
AACAATACCTATGTTACAGAAGGGAGTAATTTTTTGATCATAACTGGACCAAACATGAGT
GGAAAATCCACATATTTAAAACAGATTGCTCTTTGTCAGATTATGGCCCAGATTGGATCA
TATGTTCCAGCAGAATATTCTTCCTTTAGAATTGCTAAACAGATTTTTACAAGAATTAGT
ACTGATGATGATATCGAAACAAATTCATCAACATTTATGAAAGAAATGAAAGAGATAGCA
TATATTCTACATAATGCTAATGACAAATCGCTCATATTAATTGATGAACTTGGCAGAGGT
ACTAATACGGAAGAAGGTATTGGCATTTGTTATGCTGTTTGTGAATATCTACTGAGCTTA
AAGGCATTTACACTGTTTGCTACACATTTCCTGGAACTATGCCATATTGATGCCCTGTAT
CCTAATGTAGAAAACATGCATTTTGAAGTTCAACATGTAAAGAATACCTCAAGAAATAAA
GAAGCAATTTTGTATACCTACAAACTTTCTAAGGGACTCACAGAAGAGAAAAATTATGGA
TTAAAAGCTGCAGAGGTGTCATCACTTCCACCATCAATTGTCTTGGATGCCAAGGAAATC
ACAACTCAAATTACGAGACAAATTTTGCAAAACCAAAGGAGTACCCCTGAGATGGAAAGA
CAGAGAGCTGTGTACCATCTAGCCACTAGGCTTGTTCAAACTGCTCGAAACTCTCAATTG
GATCCAGACAGTTTACGAATATATTTAAGTAACCTCAAGAAGAAGTACAAAGAAGATTTT
CCCAGGACTGAACAAGTTCCAGAAAAGACTGAAGAAGTTTAAACGAATTCGAGCTCGGTA
CCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGC
CCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGG
GGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCT
TGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTG
CTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCG
GGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTT
GCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCT
GGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGA
TGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAA
CAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGAC
TGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGG
CGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAG
GCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTT
GTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTG
TCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTG
CATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGA
GCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAG
GGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGAT
CTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTT
TCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTG
GCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTT
TACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTC
TTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGC
TCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACAT
GTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTT
CCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCG
AAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTC
TCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGT
GGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAA
GCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTA
TCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAA
CAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAA
CTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTT
CGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTT
TTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGAT
CTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCAT
GAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCA
CGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTA
AGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTA
TCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCC
GTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACT
TACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGG
CGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCT
GATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAA
CTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGG
GAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTA
TCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGA
ACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGC
ATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTT
TGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT