OR52B1P ORF clone FHC11290

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Halotag ORF Clone FHC11290

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Clone info.

Species

human

Clone Name

pFN21AE0821 Sequence (with vector) Restriction Map

Product ID

FHC11290

Flexi Clone PID

FXC11290

ORF Sequence

DNA sequence (810 bp)
Protein sequence (270 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB529252]

Gene

KIEE0821

Symbol

OR52B1P

Alias : PJCG4

Description

olfactory receptor, family 52, subfamily B, member 1 pseudogene

Original Clone ID

cp01221

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 810 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 270 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS53598.1 2.2e-51 65.8 OR52B2 CCDS31386.1 5.8e-43 59.8 OR52H1 CCDS41611.1 2e-40 60.0 OR52B6 CCDS31384.1 1.6e-39 54.5 OR52D1 CCDS31400.1 4.3e-37 52.2 OR52E8 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 41 65 PR00237 GPCR IPR000276 70 91 PR00237 GPCR IPR000725 103 114 PR00245 Olfactory receptor IPR000276 115 137 PR00237 GPCR IPR000725 140 152 PR00245 Olfactory receptor IPR000725 187 203 PR00245 Olfactory receptor IPR000725 247 256 PR00245 Olfactory receptor HMMPfam IPR000276 56 246 PF00001 GPCR ProfileScan IPR017452 46 270 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 14 MFGANLTTFHPTLFILLGIPGLE 36 SECONDARY 23 2 42 LSIPFYLMYITAVLGNGALILVV 64 PRIMARY 23 3 78 AGTDILLSTTTVPKALAIFWVHA 100 SECONDARY 23 4 115 IHVAFVAESGILLAMAFDSYVAI 137 PRIMARY 23 5 153 GKMTLTIWGQSIGTIFPVIFLL 174 SECONDARY 22 6 217 SVLVDVAFIGFSYTLILQAVFRL 239 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_689643 318 611267 46.5 89.3 NP_110401 320 611268 45.7 89.3 NP_002539 312 164342 33.2 85.2 NP_001005191 312 611538 34.9 91.5 NP_835462 317 608493 33.9 88.1 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE0821 Download

>KIEE0821  810 bp
ATGTTCTTTAGTCTTCATAGAGAGACTCCAAAAGAAGGCATGTTTGGTGCTAATCTCACC
ACCTTCCATCCCACTCTATTCATTCTCCTTGGCATCCCAGGACTGGAGCAATACCACATC
TGGCTTTCCATTCCTTTCTACCTTATGTACATCACTGCAGTCTTGGGAAATGGAGCCCTC
ATCCTAGTTGTCCTCAGTGAACACACCCTCCATGTCTTCCTATCCATGCTGGCTGGCACT
GATATCCTGCTATCCACCACCACTGTGCCTAAGGCCTTGGCGATCTTCTGGGTCCACGCT
GGGGAGATAGCCTTTGATGCCTGCATTACTCAGATGTTTTTCATTCATGTTGCCTTTGTG
GCTGAGTCAGGAATCCTGCTGGCCATGGCATTTGACAGTTATGTAGCCATTTGTACTCCC
TTGAGATACACTACCATCTTAACTTCTATGGTAATTGGAAAAATGACCCTGACAATCTGG
GGACAAAGCATTGGGACAATTTTTCCTGTCATATTCCTGCTGAAGAGGCTGCCATACTGT
CAGACCAATATCATCCCCCACTCATACTGTGAGCACATTGGGGTGGCCCAATTGGCCTGT
GCTGACATAACTGTCAATATCTGGTATGGCTTTTCAGTGCCAATGGCATCGGTTTTGGTA
GATGTTGCATTCATTGGTTTTTCCTACACTTTGATCCTCCAGGCTGTGTTTAGACTTCCT
TCCCAGGAGTCCCAGCACAAAGCTCTTAACACCTGTGGTTCTACATTGGAGTTGTTCTCC
TCTTCTTCATCCCATCATTTTTTACTTTCC

ORF Protein

Cloned ORF protein sequence for pFN21AE0821 Download

>KIEE0821  270 aa
MFFSLHRETPKEGMFGANLTTFHPTLFILLGIPGLEQYHIWLSIPFYLMYITAVLGNGAL
ILVVLSEHTLHVFLSMLAGTDILLSTTTVPKALAIFWVHAGEIAFDACITQMFFIHVAFV
AESGILLAMAFDSYVAICTPLRYTTILTSMVIGKMTLTIWGQSIGTIFPVIFLLKRLPYC
QTNIIPHSYCEHIGVAQLACADITVNIWYGFSVPMASVLVDVAFIGFSYTLILQAVFRLP
SQESQHKALNTCGSTLELFSSSSSHHFLLS

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE0821 Download

>pFN21AE0821  5515 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGTTCTTTAGTCTTCATAGAGAGACTCCAAAAGA
AGGCATGTTTGGTGCTAATCTCACCACCTTCCATCCCACTCTATTCATTCTCCTTGGCAT
CCCAGGACTGGAGCAATACCACATCTGGCTTTCCATTCCTTTCTACCTTATGTACATCAC
TGCAGTCTTGGGAAATGGAGCCCTCATCCTAGTTGTCCTCAGTGAACACACCCTCCATGT
CTTCCTATCCATGCTGGCTGGCACTGATATCCTGCTATCCACCACCACTGTGCCTAAGGC
CTTGGCGATCTTCTGGGTCCACGCTGGGGAGATAGCCTTTGATGCCTGCATTACTCAGAT
GTTTTTCATTCATGTTGCCTTTGTGGCTGAGTCAGGAATCCTGCTGGCCATGGCATTTGA
CAGTTATGTAGCCATTTGTACTCCCTTGAGATACACTACCATCTTAACTTCTATGGTAAT
TGGAAAAATGACCCTGACAATCTGGGGACAAAGCATTGGGACAATTTTTCCTGTCATATT
CCTGCTGAAGAGGCTGCCATACTGTCAGACCAATATCATCCCCCACTCATACTGTGAGCA
CATTGGGGTGGCCCAATTGGCCTGTGCTGACATAACTGTCAATATCTGGTATGGCTTTTC
AGTGCCAATGGCATCGGTTTTGGTAGATGTTGCATTCATTGGTTTTTCCTACACTTTGAT
CCTCCAGGCTGTGTTTAGACTTCCTTCCCAGGAGTCCCAGCACAAAGCTCTTAACACCTG
TGGTTCTACATTGGAGTTGTTCTCCTCTTCTTCATCCCATCATTTTTTACTTTCCGTTTA
AACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTG
ATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAAT
AACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAG
TTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGAT
GCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGC
ATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAAC
CTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTT
GTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCT
TTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACC
CCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCC
TGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTC
GCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTG
GTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGAT
CTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGC
ACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAA
CTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAA
AAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGT
GATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCT
TTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAAT
GAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTG
CGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGG
ATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTT
ATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGG
CCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATG
GATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTC
GAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGT
TATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGG
CCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACG
AGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGAT
ACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTA
CCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCT
GTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCC
CCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAA
GACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATG
TAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAG
TATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTT
GATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTA
CGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTC
AGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCA
CCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGA
TGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTAC
CCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTT
TCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTA
GCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATC
GAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT