OR52B1P ORF clone FXC11290

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Flexi ORF Clone FXC11290

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Clone info.

Species

human

Clone Name

pF1KE0821 Sequence (with vector) Restriction Map

Product ID

FXC11290

HaloTag Clone PID

FHC11290

ORF Sequence

DNA sequence (810 bp)
Protein sequence (270 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB529252]

Gene

KIEE0821

Symbol

OR52B1P

Alias : PJCG4

Description

olfactory receptor, family 52, subfamily B, member 1 pseudogene

Original Clone ID

cp01221

Features of the cloned ORF sequence

Description

Length: 810 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 270 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS53598.1 2.2e-51 65.8 OR52B2 CCDS31386.1 5.8e-43 59.8 OR52H1 CCDS41611.1 2e-40 60.0 OR52B6 CCDS31384.1 1.6e-39 54.5 OR52D1 CCDS31400.1 4.3e-37 52.2 OR52E8 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 41 65 PR00237 GPCR IPR000276 70 91 PR00237 GPCR IPR000725 103 114 PR00245 Olfactory receptor IPR000276 115 137 PR00237 GPCR IPR000725 140 152 PR00245 Olfactory receptor IPR000725 187 203 PR00245 Olfactory receptor IPR000725 247 256 PR00245 Olfactory receptor HMMPfam IPR000276 56 246 PF00001 GPCR ProfileScan IPR017452 46 270 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 14 MFGANLTTFHPTLFILLGIPGLE 36 SECONDARY 23 2 42 LSIPFYLMYITAVLGNGALILVV 64 PRIMARY 23 3 78 AGTDILLSTTTVPKALAIFWVHA 100 SECONDARY 23 4 115 IHVAFVAESGILLAMAFDSYVAI 137 PRIMARY 23 5 153 GKMTLTIWGQSIGTIFPVIFLL 174 SECONDARY 22 6 217 SVLVDVAFIGFSYTLILQAVFRL 239 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_689643 318 611267 46.5 89.3 NP_110401 320 611268 45.7 89.3 NP_002539 312 164342 33.2 85.2 NP_001005191 312 611538 34.9 91.5 NP_835462 317 608493 33.9 88.1 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0821 Download

>KIEE0821  810 bp
ATGTTCTTTAGTCTTCATAGAGAGACTCCAAAAGAAGGCATGTTTGGTGCTAATCTCACC
ACCTTCCATCCCACTCTATTCATTCTCCTTGGCATCCCAGGACTGGAGCAATACCACATC
TGGCTTTCCATTCCTTTCTACCTTATGTACATCACTGCAGTCTTGGGAAATGGAGCCCTC
ATCCTAGTTGTCCTCAGTGAACACACCCTCCATGTCTTCCTATCCATGCTGGCTGGCACT
GATATCCTGCTATCCACCACCACTGTGCCTAAGGCCTTGGCGATCTTCTGGGTCCACGCT
GGGGAGATAGCCTTTGATGCCTGCATTACTCAGATGTTTTTCATTCATGTTGCCTTTGTG
GCTGAGTCAGGAATCCTGCTGGCCATGGCATTTGACAGTTATGTAGCCATTTGTACTCCC
TTGAGATACACTACCATCTTAACTTCTATGGTAATTGGAAAAATGACCCTGACAATCTGG
GGACAAAGCATTGGGACAATTTTTCCTGTCATATTCCTGCTGAAGAGGCTGCCATACTGT
CAGACCAATATCATCCCCCACTCATACTGTGAGCACATTGGGGTGGCCCAATTGGCCTGT
GCTGACATAACTGTCAATATCTGGTATGGCTTTTCAGTGCCAATGGCATCGGTTTTGGTA
GATGTTGCATTCATTGGTTTTTCCTACACTTTGATCCTCCAGGCTGTGTTTAGACTTCCT
TCCCAGGAGTCCCAGCACAAAGCTCTTAACACCTGTGGTTCTACATTGGAGTTGTTCTCC
TCTTCTTCATCCCATCATTTTTTACTTTCC

ORF Protein

Cloned ORF protein sequence for pF1KE0821 Download

>KIEE0821  270 aa
MFFSLHRETPKEGMFGANLTTFHPTLFILLGIPGLEQYHIWLSIPFYLMYITAVLGNGAL
ILVVLSEHTLHVFLSMLAGTDILLSTTTVPKALAIFWVHAGEIAFDACITQMFFIHVAFV
AESGILLAMAFDSYVAICTPLRYTTILTSMVIGKMTLTIWGQSIGTIFPVIFLLKRLPYC
QTNIIPHSYCEHIGVAQLACADITVNIWYGFSVPMASVLVDVAFIGFSYTLILQAVFRLP
SQESQHKALNTCGSTLELFSSSSSHHFLLS

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0821 Download

>pF1KE0821  3923 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGTTCTTTAGT
CTTCATAGAGAGACTCCAAAAGAAGGCATGTTTGGTGCTAATCTCACCACCTTCCATCCC
ACTCTATTCATTCTCCTTGGCATCCCAGGACTGGAGCAATACCACATCTGGCTTTCCATT
CCTTTCTACCTTATGTACATCACTGCAGTCTTGGGAAATGGAGCCCTCATCCTAGTTGTC
CTCAGTGAACACACCCTCCATGTCTTCCTATCCATGCTGGCTGGCACTGATATCCTGCTA
TCCACCACCACTGTGCCTAAGGCCTTGGCGATCTTCTGGGTCCACGCTGGGGAGATAGCC
TTTGATGCCTGCATTACTCAGATGTTTTTCATTCATGTTGCCTTTGTGGCTGAGTCAGGA
ATCCTGCTGGCCATGGCATTTGACAGTTATGTAGCCATTTGTACTCCCTTGAGATACACT
ACCATCTTAACTTCTATGGTAATTGGAAAAATGACCCTGACAATCTGGGGACAAAGCATT
GGGACAATTTTTCCTGTCATATTCCTGCTGAAGAGGCTGCCATACTGTCAGACCAATATC
ATCCCCCACTCATACTGTGAGCACATTGGGGTGGCCCAATTGGCCTGTGCTGACATAACT
GTCAATATCTGGTATGGCTTTTCAGTGCCAATGGCATCGGTTTTGGTAGATGTTGCATTC
ATTGGTTTTTCCTACACTTTGATCCTCCAGGCTGTGTTTAGACTTCCTTCCCAGGAGTCC
CAGCACAAAGCTCTTAACACCTGTGGTTCTACATTGGAGTTGTTCTCCTCTTCTTCATCC
CATCATTTTTTACTTTCCGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAG
TCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTT
GGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTT
GAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGC
CCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGC
GTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTG
CGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCG
GCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCC
TGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGA
TCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCA
GGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATC
GGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTC
AAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGG
CTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGG
GACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCT
GCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCT
ACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAA
GCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAA
CTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGC
GATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGT
GGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCT
GAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCC
GATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGG
GGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAAT
ACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCA
AAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCC
TGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATA
AAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCC
GCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTC
ACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGA
ACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCC
GGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAG
GTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAG
GACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAG
CTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCA
GATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGA
CGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGAT
CTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGC
TGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCC
TGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCA
GTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCG
TTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAG
CCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT
TTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCC
TGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCG
TAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAA
TAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGA
ACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGC
CCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGG
CCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATA
CATTCAAATATGTATCCGCTCAT