| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | C0LE64_9ROSI | 620 | 100.0 | 100.0 | (tr|C0LE64) DNA-directed RNA polymerase subunit beta'' OS=Jatropha curcas GN=rpoC2 PE=3 SV=1 |
| Arabidopsis_pep | ATCG00170.1 | 513 | 86.3 | 91.7 | | Symbols: RPOC2 | DNA-directed RNA polymerase family protein | chrC:15938-20068 REVERSE LENGTH=1376 |
| soybean_pep | Glyma02g38600.1 | 233 | 75.9 | 85.5 | |
| Medicago_pep | IMGA|Medtr4g051120.1 | 460 | 86.3 | 92.4 | DNA-directed RNA polymerase subunit beta'' (AHRD V1 ***- Q8HVY3); contains Interpro domain(s) IPR012756 DNA-directed RNA polymerase, subunit beta'' chr04_pseudomolecule_IMGAG_V3.5 15117779-15113443 E EGN_Mt100125 20100825 |
| grape_pep | GSVIVT01030958001 | 57.4 | 70.3 | 86.5 | |
| castor_bean_cds | 29923.m000786 | 1193 | 94.6 | 94.6 | DNA-directed RNA polymerase beta chain, putative |
| castor_bean_pep | 29923.m000786 | 493 | 91.1 | 94.1 | DNA-directed RNA polymerase beta chain, putative |
| JAT_unigene | contig00003 | 1800 | 99.9 | 99.9 | length=10213 numreads=756 gene=isogroup00001 status=ig_thresh |
| Jcr4U29398.20 | length: 303 aa. | |||
| IPR007081 | RNA polymerase Rpb1, domain 5 | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003677 | DNA binding | ||
| Molecular Function | GO:0003899 | DNA-directed RNA polymerase activity | ||
| Biological Process | GO:0006351 | transcription, DNA-dependent | ||
| HMMPfam | PF04998 | RNA_pol_Rpb1_5 | 6.6e-07 | 123-208 |
| no_ID | ||||
| HMMPanther | PTHR19376 | FAMILY | 2.8e-73 | 106-302 |
| HMMPanther | PTHR19376:SF33 | DNA-DIRECTED | 2.8e-73 | 106-302 |
| superfamily | SSF64484 | beta | 9.3e-46 | 50-268 |