Jatropha Genome Database
- Jcr4U29398.20
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Jcr4U29398.20
(303 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma02g38600.1 233 3e-61
Glyma11g08610.2 52 8e-07
Glyma01g36700.2 52 8e-07
Glyma01g36700.1 52 8e-07
Glyma11g08610.3 52 8e-07
Glyma11g08610.1 52 8e-07
Glyma09g41550.1 51 2e-06
>Glyma02g38600.1
Length = 163
Score = 233 bits (593), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 110/145 (75%), Positives = 124/145 (85%)
Query: 2 AKNGPHLKSGQVIIVRMDSVVIRSAKPYLAAPGATVHGHYGEIFYEGDTLVTFLYEKSRS 61
KN PHLKSGQ++IV+MD V IR A PYLA PGATVH HYG+I +EGD LVTF+ EK RS
Sbjct: 16 TKNAPHLKSGQILIVQMDYVGIRLANPYLATPGATVHDHYGKIIFEGDILVTFILEKPRS 75
Query: 62 GDITQGLPKVEQVLEVRSIDSISISLEKRVEGWNECITRILGIPWGFLIGAELTIVQSRI 121
GDITQGLPKVE VLEVR ID IS++LEKRV+ WN CIT+ILGIPWGFLIG ELTIVQS I
Sbjct: 76 GDITQGLPKVEHVLEVRLIDPISMNLEKRVDTWNGCITKILGIPWGFLIGDELTIVQSHI 135
Query: 122 SLVNKIQKVYRSQGVQIHNRHIEII 146
LVNKIQK+YRSQG+ IHNRHIE++
Sbjct: 136 FLVNKIQKIYRSQGLHIHNRHIELL 160
>Glyma11g08610.2
Length = 1807
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 183 LEEAICYRAILLGITRASLNTQSF--ISEASFQETARVLAKAALRGRIDWLKGLKENVVL 240
L + + YR L+ ITR +N + SF+ET +L AA+ D+L+G+ EN++L
Sbjct: 1395 LCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDYLRGVTENIML 1454
Query: 241 GGMIPGGTG 249
G + P GTG
Sbjct: 1455 GQLAPIGTG 1463
>Glyma01g36700.2
Length = 1831
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 183 LEEAICYRAILLGITRASLNTQSF--ISEASFQETARVLAKAALRGRIDWLKGLKENVVL 240
L + + YR L+ ITR +N + SF+ET +L AA+ D+L+G+ EN++L
Sbjct: 1395 LCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDYLRGVTENIML 1454
Query: 241 GGMIPGGTG 249
G + P GTG
Sbjct: 1455 GQLAPIGTG 1463
>Glyma01g36700.1
Length = 1831
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 183 LEEAICYRAILLGITRASLNTQSF--ISEASFQETARVLAKAALRGRIDWLKGLKENVVL 240
L + + YR L+ ITR +N + SF+ET +L AA+ D+L+G+ EN++L
Sbjct: 1395 LCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDYLRGVTENIML 1454
Query: 241 GGMIPGGTG 249
G + P GTG
Sbjct: 1455 GQLAPIGTG 1463
>Glyma11g08610.3
Length = 1831
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 183 LEEAICYRAILLGITRASLNTQSF--ISEASFQETARVLAKAALRGRIDWLKGLKENVVL 240
L + + YR L+ ITR +N + SF+ET +L AA+ D+L+G+ EN++L
Sbjct: 1395 LCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDYLRGVTENIML 1454
Query: 241 GGMIPGGTG 249
G + P GTG
Sbjct: 1455 GQLAPIGTG 1463
>Glyma11g08610.1
Length = 1831
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 183 LEEAICYRAILLGITRASLNTQSF--ISEASFQETARVLAKAALRGRIDWLKGLKENVVL 240
L + + YR L+ ITR +N + SF+ET +L AA+ D+L+G+ EN++L
Sbjct: 1395 LCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDYLRGVTENIML 1454
Query: 241 GGMIPGGTG 249
G + P GTG
Sbjct: 1455 GQLAPIGTG 1463
>Glyma09g41550.1
Length = 1683
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 183 LEEAICYRAILLGITRASLNTQSF--ISEASFQETARVLAKAALRGRIDWLKGLKENVVL 240
L E + YR L+ ITR +N + SF+ET +L AA D L+G+ EN++L
Sbjct: 1378 LCETMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAAYAETDSLRGVTENIIL 1437
Query: 241 GGMIPGGTG 249
G + P GTG
Sbjct: 1438 GQLAPIGTG 1446