Jatropha Genome Database

Jcr4U29398.20
Show Alignment: 
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Jcr4U29398.20 
         (303 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g38600.1                                                       233   3e-61
Glyma11g08610.2                                                        52   8e-07
Glyma01g36700.2                                                        52   8e-07
Glyma01g36700.1                                                        52   8e-07
Glyma11g08610.3                                                        52   8e-07
Glyma11g08610.1                                                        52   8e-07
Glyma09g41550.1                                                        51   2e-06

>Glyma02g38600.1 
          Length = 163

 Score =  233 bits (593), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 110/145 (75%), Positives = 124/145 (85%)

Query: 2   AKNGPHLKSGQVIIVRMDSVVIRSAKPYLAAPGATVHGHYGEIFYEGDTLVTFLYEKSRS 61
            KN PHLKSGQ++IV+MD V IR A PYLA PGATVH HYG+I +EGD LVTF+ EK RS
Sbjct: 16  TKNAPHLKSGQILIVQMDYVGIRLANPYLATPGATVHDHYGKIIFEGDILVTFILEKPRS 75

Query: 62  GDITQGLPKVEQVLEVRSIDSISISLEKRVEGWNECITRILGIPWGFLIGAELTIVQSRI 121
           GDITQGLPKVE VLEVR ID IS++LEKRV+ WN CIT+ILGIPWGFLIG ELTIVQS I
Sbjct: 76  GDITQGLPKVEHVLEVRLIDPISMNLEKRVDTWNGCITKILGIPWGFLIGDELTIVQSHI 135

Query: 122 SLVNKIQKVYRSQGVQIHNRHIEII 146
            LVNKIQK+YRSQG+ IHNRHIE++
Sbjct: 136 FLVNKIQKIYRSQGLHIHNRHIELL 160


>Glyma11g08610.2 
          Length = 1807

 Score = 52.0 bits (123), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 2/69 (2%)

Query: 183  LEEAICYRAILLGITRASLNTQSF--ISEASFQETARVLAKAALRGRIDWLKGLKENVVL 240
            L + + YR  L+ ITR  +N      +   SF+ET  +L  AA+    D+L+G+ EN++L
Sbjct: 1395 LCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDYLRGVTENIML 1454

Query: 241  GGMIPGGTG 249
            G + P GTG
Sbjct: 1455 GQLAPIGTG 1463


>Glyma01g36700.2 
          Length = 1831

 Score = 52.0 bits (123), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 2/69 (2%)

Query: 183  LEEAICYRAILLGITRASLNTQSF--ISEASFQETARVLAKAALRGRIDWLKGLKENVVL 240
            L + + YR  L+ ITR  +N      +   SF+ET  +L  AA+    D+L+G+ EN++L
Sbjct: 1395 LCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDYLRGVTENIML 1454

Query: 241  GGMIPGGTG 249
            G + P GTG
Sbjct: 1455 GQLAPIGTG 1463


>Glyma01g36700.1 
          Length = 1831

 Score = 52.0 bits (123), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 2/69 (2%)

Query: 183  LEEAICYRAILLGITRASLNTQSF--ISEASFQETARVLAKAALRGRIDWLKGLKENVVL 240
            L + + YR  L+ ITR  +N      +   SF+ET  +L  AA+    D+L+G+ EN++L
Sbjct: 1395 LCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDYLRGVTENIML 1454

Query: 241  GGMIPGGTG 249
            G + P GTG
Sbjct: 1455 GQLAPIGTG 1463


>Glyma11g08610.3 
          Length = 1831

 Score = 52.0 bits (123), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 2/69 (2%)

Query: 183  LEEAICYRAILLGITRASLNTQSF--ISEASFQETARVLAKAALRGRIDWLKGLKENVVL 240
            L + + YR  L+ ITR  +N      +   SF+ET  +L  AA+    D+L+G+ EN++L
Sbjct: 1395 LCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDYLRGVTENIML 1454

Query: 241  GGMIPGGTG 249
            G + P GTG
Sbjct: 1455 GQLAPIGTG 1463


>Glyma11g08610.1 
          Length = 1831

 Score = 52.0 bits (123), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 2/69 (2%)

Query: 183  LEEAICYRAILLGITRASLNTQSF--ISEASFQETARVLAKAALRGRIDWLKGLKENVVL 240
            L + + YR  L+ ITR  +N      +   SF+ET  +L  AA+    D+L+G+ EN++L
Sbjct: 1395 LCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDYLRGVTENIML 1454

Query: 241  GGMIPGGTG 249
            G + P GTG
Sbjct: 1455 GQLAPIGTG 1463


>Glyma09g41550.1 
          Length = 1683

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 2/69 (2%)

Query: 183  LEEAICYRAILLGITRASLNTQSF--ISEASFQETARVLAKAALRGRIDWLKGLKENVVL 240
            L E + YR  L+ ITR  +N      +   SF+ET  +L  AA     D L+G+ EN++L
Sbjct: 1378 LCETMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAAYAETDSLRGVTENIIL 1437

Query: 241  GGMIPGGTG 249
            G + P GTG
Sbjct: 1438 GQLAPIGTG 1446