Jatropha Genome Database
- Jcr4U29398.20
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jcr4U29398.20
(912 letters)
Database: JAT_unigene
122,497 sequences; 49,272,789 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
contig00003 length=10213 numreads=756 gene=isogroup00001 sta... 1800 0.0
callus_GF8I98N02F0MW1 66 6e-10
>contig00003 length=10213 numreads=756 gene=isogroup00001
status=ig_thresh
Length = 10213
Score = 1800 bits (908), Expect = 0.0
Identities = 911/912 (99%)
Strand = Plus / Minus
Query: 1 atggccaaaaacggaccccatctaaaatcgggtcaagttataattgttcgcatggactcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5166 atggccaaaaacggaccccatctaaaatcgggtcaagttataattgttcgcatggactcg 5107
Query: 61 gtagtaatacgatcagcaaagccctatttggccgctccaggagcaaccgttcatggccat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5106 gtagtaatacgatcagcaaagccctatttggccgctccaggagcaaccgttcatggccat 5047
Query: 121 tatggagaaatcttttacgaaggagatacattagttacatttttatatgaaaaatcgaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5046 tatggagaaatcttttacgaaggagatacattagttacatttttatatgaaaaatcgaga 4987
Query: 181 tctggtgatataacgcagggtcttccaaaagtggaacaagtgttagaagtgcgctcaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4986 tctggtgatataacgcagggtcttccaaaagtggaacaagtgttagaagtgcgctcaatt 4927
Query: 241 gattcaatatcgataagcctagaaaagagagttgagggttggaacgagtgtataacaaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4926 gattcaatatcgataagcctagaaaagagagttgagggttggaacgagtgtataacaaga 4867
Query: 301 attcttggaattccttggggattcttgattggtgctgaactaactatagtgcaaagtcgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4866 attcttggaattccttggggattcttgattggtgctgaactaactatagtgcaaagtcgt 4807
Query: 361 atctctttggttaataagattcaaaaggtttatcgatcccaaggagtgcagatacataat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4806 atctctttggttaataagattcaaaaggtttatcgatcccaaggagtgcagatacataat 4747
Query: 421 aggcatatagaaattattgtacgtcaaataacatccaaagttttggtttcagaagacgga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4746 aggcatatagaaattattgtacgtcaaataacatccaaagttttggtttcagaagacgga 4687
Query: 481 atgtcaaatgttttttcacccggagaactaattggattgttgcgagcggaacgaacggga 540
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4686 atgtcaaatgtttttttacccggagaactaattggattgttgcgagcggaacgaacggga 4627
Query: 541 cgcgctttagaagaagccatctgttatcgagccatattattaggaataacgagagcatct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4626 cgcgctttagaagaagccatctgttatcgagccatattattaggaataacgagagcatct 4567
Query: 601 ctgaatactcaaagtttcatatccgaggccagttttcaagaaactgctcgcgttttagca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4566 ctgaatactcaaagtttcatatccgaggccagttttcaagaaactgctcgcgttttagca 4507
Query: 661 aaagccgctctccgcggtcgtatcgattggttgaaaggcctgaaagaaaacgttgttcta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4506 aaagccgctctccgcggtcgtatcgattggttgaaaggcctgaaagaaaacgttgttcta 4447
Query: 721 ggtggtatgatacccggtggtaccggattcaaaggattagtgcaaggctcaaggcaacat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4446 ggtggtatgatacccggtggtaccggattcaaaggattagtgcaaggctcaaggcaacat 4387
Query: 781 aataacattcctttgaaaaccaaaaagaagaatttattcgagggggaatttagagataga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4386 aataacattcctttgaaaaccaaaaagaagaatttattcgagggggaatttagagataga 4327
Query: 841 gatattttattccaccacagagagttatttgattcttgcatttcaaaaaatttctatgat 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4326 gatattttattccaccacagagagttatttgattcttgcatttcaaaaaatttctatgat 4267
Query: 901 acagcaaaataa 912
||||||||||||
Sbjct: 4266 acagcaaaataa 4255
>callus_GF8I98N02F0MW1
Length = 459
Score = 65.9 bits (33), Expect = 6e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 309 aattccttggggattcttgattggtgctgaactaactatagtgcaaagt 357
|||||||||| |||||||||||||| ||||||||||||| || ||||||
Sbjct: 203 aattccttggagattcttgattggttctgaactaactattgtacaaagt 155