database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
---|---|---|---|---|---|
trembl | C0LE65_9ROSI | 377 | 100.0 | 100.0 | (tr|C0LE65) DNA-directed RNA polymerase OS=Jatropha curcas GN=rpoC1 PE=3 SV=1 |
Arabidopsis_pep | ATCG00180.1 | 365 | 95.7 | 97.8 | | Symbols: RPOC1 | DNA-directed RNA polymerase family protein | chrC:20251-23084 REVERSE LENGTH=680 |
soybean_pep | Glyma11g15530.1 | 93.2 | 30.0 | 48.6 | |
Medicago_pep | IMGA|Medtr4g034840.1 | 369 | 95.7 | 97.8 | DNA-directed RNA polymerase subunit beta' (AHRD V1 *-*- Q9BBS8); contains Interpro domain(s) IPR005294 ATPase, F1 complex, alpha subunit chr04_pseudomolecule_IMGAG_V3.5 10885330-10876279 E EGN_Mt100125 20100825 |
grape_pep | GSVIVT01017094001 | 123 | 86.4 | 92.4 | |
castor_bean_cds | 51325.m000005 | 902 | 96.3 | 96.3 | DNA-directed RNA polymerase beta chain, putative |
castor_bean_pep | 51325.m000005 | 354 | 97.8 | 98.3 | DNA-directed RNA polymerase beta chain, putative |
JAT_unigene | contig00003 | 1092 | 100.0 | 100.0 | length=10213 numreads=756 gene=isogroup00001 status=ig_thresh |
Jcr4S02936.20 | length: 195 aa. | |||
IPR000722 | RNA polymerase, alpha subunit | |||
---|---|---|---|---|
method | AccNumber | shortName | E-value | location |
Molecular Function | GO:0003677 | DNA binding | ||
Molecular Function | GO:0003899 | DNA-directed RNA polymerase activity | ||
Biological Process | GO:0006351 | transcription, DNA-dependent | ||
HMMPfam | PF00623 | RNA_pol_Rpb1_2 | 4e-46 | 3-144 |
IPR006592 | RNA polymerase, N-terminal | |||
Molecular Function | GO:0003677 | DNA binding | ||
Molecular Function | GO:0003899 | DNA-directed RNA polymerase activity | ||
Biological Process | GO:0006351 | transcription, DNA-dependent | ||
HMMSmart | SM00663 | no description | 1.1e-61 | 1-173 |
IPR007066 | RNA polymerase Rpb1, domain 3 | |||
Molecular Function | GO:0003677 | DNA binding | ||
Molecular Function | GO:0003899 | DNA-directed RNA polymerase activity | ||
Biological Process | GO:0006351 | transcription, DNA-dependent | ||
HMMPfam | PF04983 | RNA_pol_Rpb1_3 | 4.5e-06 | 148-176 |
no_ID | ||||
HMMPanther | PTHR19376 | FAMILY | 5e-107 | 1-174 |
HMMPanther | PTHR19376:SF4 | DNA-DIRECTED | 5e-107 | 1-174 |
superfamily | SSF64484 | beta | 2.9e-81 | 1-176 |