Jatropha Genome Database

Jcr4S02936.20
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Jcr4S02936.20
         (195 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g15530.1                                                        93   1e-19
Glyma09g41550.1                                                        84   1e-16
Glyma11g08610.3                                                        82   3e-16
Glyma11g08610.1                                                        82   3e-16
Glyma01g36700.2                                                        82   3e-16
Glyma01g36700.1                                                        82   3e-16
Glyma11g08610.2                                                        82   4e-16
Glyma10g12530.1                                                        78   5e-15
Glyma02g31290.1                                                        69   3e-12
Glyma11g02920.1                                                        68   6e-12
Glyma13g26690.1                                                        66   2e-11
Glyma01g42480.1                                                        64   8e-11
Glyma15g37710.1                                                        63   2e-10

>Glyma11g15530.1 
          Length = 1255

 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 102/210 (48%), Gaps = 27/210 (12%)

Query: 3   GKRVDYSGRSVIVVGPSLSLHRCGLPREIA--------IELFQIFVIRGLIRQ------- 47
           GKRV+Y+GR+VI   P+L +    +P  +A        +    I  +R  +R        
Sbjct: 220 GKRVEYTGRTVISPDPNLKISEVAIPIHMARILTYPERVTHHNIEKLRQCVRNGPDKYPG 279

Query: 48  ---------HLASNIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQP 98
                    H  S   + + +  ++  I   + + +  G  VL NR P+LHR+ I   + 
Sbjct: 280 ARMLRRDGGHSWSLKVLCRKRAADELRIGDIVDRHLEDGDIVLFNRQPSLHRMSIMCHRA 339

Query: 99  ILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQTEARLLMFSHMNLLSPAIGDPI 158
            ++  R +  +  VC  +NADFDGD+M +HVP + EA+TEA LLM    NL +P  G+ +
Sbjct: 340 RIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAILLMGVENNLCTPKNGEIL 399

Query: 159 SVPTQDMLIGLYVLTSGNRRGICANRALLS 188
              TQD L   +++T   R+    +R+  S
Sbjct: 400 VASTQDFLTSSFLIT---RKDTFYDRSTFS 426


>Glyma09g41550.1 
          Length = 1683

 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 96/199 (48%), Gaps = 26/199 (13%)

Query: 1   MLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIEL--------FQIFVIRGLIRQ--HLA 50
           ++GKRVD+S R+VI   P++++ + G+P  IA+ L        + I  ++ L+    H  
Sbjct: 350 LMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPP 409

Query: 51  SNIGVAKSKIREKE----------------PIVWEILQEVMQGHPVLLNRAPTLHRLGIQ 94
                AK  IR+                   + +++ + +  G  VL NR P+LH++ I 
Sbjct: 410 PGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIM 469

Query: 95  AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQTEARLLMFSHMNLLSPAI 154
             +  ++      L+  V   +NADFDGD+M +HVP SLE + E   LM     ++SP  
Sbjct: 470 GHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSLETRAEVLELMMVPKCIVSPQS 529

Query: 155 GDPISVPTQDMLIGLYVLT 173
             P+    QD L+G   +T
Sbjct: 530 NKPVMGIVQDTLLGCRKIT 548


>Glyma11g08610.3 
          Length = 1831

 Score = 82.0 bits (201), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 26/199 (13%)

Query: 1   MLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIEL--------FQIFVIRGLIR--QHLA 50
           ++GKRVD+S R+VI   P++++ + G+P  IA+ L        + I  ++ L+    H  
Sbjct: 354 LMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPP 413

Query: 51  SNIGVAKSKIREKE----------------PIVWEILQEVMQGHPVLLNRAPTLHRLGIQ 94
                AK  IR+                   + +++ + +  G  VL NR P+LH++ I 
Sbjct: 414 PGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIM 473

Query: 95  AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQTEARLLMFSHMNLLSPAI 154
             +  ++      L+  V   +NADFDGD+M +HVP S E + E   LM     ++SP  
Sbjct: 474 GHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQS 533

Query: 155 GDPISVPTQDMLIGLYVLT 173
             P+    QD L+G   +T
Sbjct: 534 NRPVMGIVQDTLLGCRKIT 552


>Glyma11g08610.1 
          Length = 1831

 Score = 82.0 bits (201), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 26/199 (13%)

Query: 1   MLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIEL--------FQIFVIRGLIR--QHLA 50
           ++GKRVD+S R+VI   P++++ + G+P  IA+ L        + I  ++ L+    H  
Sbjct: 354 LMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPP 413

Query: 51  SNIGVAKSKIREKE----------------PIVWEILQEVMQGHPVLLNRAPTLHRLGIQ 94
                AK  IR+                   + +++ + +  G  VL NR P+LH++ I 
Sbjct: 414 PGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIM 473

Query: 95  AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQTEARLLMFSHMNLLSPAI 154
             +  ++      L+  V   +NADFDGD+M +HVP S E + E   LM     ++SP  
Sbjct: 474 GHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQS 533

Query: 155 GDPISVPTQDMLIGLYVLT 173
             P+    QD L+G   +T
Sbjct: 534 NRPVMGIVQDTLLGCRKIT 552


>Glyma01g36700.2 
          Length = 1831

 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 26/199 (13%)

Query: 1   MLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIEL--------FQIFVIRGLIRQ--HLA 50
           ++GKRVD+S R+VI   P++++ + G+P  IA+ L        + I  ++ L+    H  
Sbjct: 354 LMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPP 413

Query: 51  SNIGVAKSKIREKE----------------PIVWEILQEVMQGHPVLLNRAPTLHRLGIQ 94
                AK  IR+                   + +++ + +  G  VL NR P+LH++ I 
Sbjct: 414 PGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIM 473

Query: 95  AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQTEARLLMFSHMNLLSPAI 154
             +  ++      L+  V   +NADFDGD+M +HVP S E + E   LM     ++SP  
Sbjct: 474 GHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQS 533

Query: 155 GDPISVPTQDMLIGLYVLT 173
             P+    QD L+G   +T
Sbjct: 534 NRPVMGIVQDTLLGCRKIT 552


>Glyma01g36700.1 
          Length = 1831

 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 26/199 (13%)

Query: 1   MLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIEL--------FQIFVIRGLIRQ--HLA 50
           ++GKRVD+S R+VI   P++++ + G+P  IA+ L        + I  ++ L+    H  
Sbjct: 354 LMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPP 413

Query: 51  SNIGVAKSKIREKE----------------PIVWEILQEVMQGHPVLLNRAPTLHRLGIQ 94
                AK  IR+                   + +++ + +  G  VL NR P+LH++ I 
Sbjct: 414 PGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIM 473

Query: 95  AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQTEARLLMFSHMNLLSPAI 154
             +  ++      L+  V   +NADFDGD+M +HVP S E + E   LM     ++SP  
Sbjct: 474 GHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQS 533

Query: 155 GDPISVPTQDMLIGLYVLT 173
             P+    QD L+G   +T
Sbjct: 534 NRPVMGIVQDTLLGCRKIT 552


>Glyma11g08610.2 
          Length = 1807

 Score = 82.0 bits (201), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 26/199 (13%)

Query: 1   MLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIEL--------FQIFVIRGLIRQ--HLA 50
           ++GKRVD+S R+VI   P++++ + G+P  IA+ L        + I  ++ L+    H  
Sbjct: 354 LMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPP 413

Query: 51  SNIGVAKSKIREKE----------------PIVWEILQEVMQGHPVLLNRAPTLHRLGIQ 94
                AK  IR+                   + +++ + +  G  VL NR P+LH++ I 
Sbjct: 414 PGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIM 473

Query: 95  AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQTEARLLMFSHMNLLSPAI 154
             +  ++      L+  V   +NADFDGD+M +HVP S E + E   LM     ++SP  
Sbjct: 474 GHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQS 533

Query: 155 GDPISVPTQDMLIGLYVLT 173
             P+    QD L+G   +T
Sbjct: 534 NRPVMGIVQDTLLGCRKIT 552


>Glyma10g12530.1 
          Length = 1649

 Score = 78.2 bits (191), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 43/216 (19%)

Query: 1   MLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIEL--------FQIFVIRGLI------- 45
           M+GKRV+++ RSVI   P L+++  G+P   A+ L        + +  +R  I       
Sbjct: 424 MMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLSYPERVTPWNVVKLRNAILNGPESH 483

Query: 46  --RQHLASNIGVAK-------------------------SKIREKEPIVWEILQEVMQGH 78
               H A  + + K                          KI + E     + + +  G 
Sbjct: 484 PGATHYADKVSIVKLPPKGKLLSLTSRKLPTSRGVILHQGKISDHEFEGKVVYRHLKDGD 543

Query: 79  PVLLNRAPTLHRLGIQAFQPILVEG-RAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQT 137
            VL+NR PTLH+  I A    +++G + + +H   C  +NADFDGD++ VH P    ++ 
Sbjct: 544 VVLVNRQPTLHKPSIMAHIVRVLKGEKTVRMHYANCSTYNADFDGDEINVHFPQDEISRA 603

Query: 138 EARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLT 173
           EA  ++ ++   + P  GDPI    QD ++   +LT
Sbjct: 604 EAYNIVNANNQYVKPTSGDPIRALIQDHIVSAALLT 639


>Glyma02g31290.1 
          Length = 643

 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 90/195 (46%), Gaps = 31/195 (15%)

Query: 1   MLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQIFVIRGLIRQHLASNIGVAKSKI 60
           M+GK V ++ RSVI   P L+++  G+P   A+ L   +  RG            A  +I
Sbjct: 157 MMGKMVYFACRSVISPDPYLAVNEIGIPPYFALRL--SYPERGYF----------ASREI 204

Query: 61  REKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEG-RAICLHPLVCK----- 114
            + E     + + +  G  VL NR PTLH+  I A    +++G + + +H   C+     
Sbjct: 205 SDHEFEGKVVYRHLKDGDVVLANRQPTLHKPSIMAHIVRVLKGEKTVRMHYANCRVTTVN 264

Query: 115 -------------GFNADFDGDQMAVHVPLSLEAQTEARLLMFSHMNLLSPAIGDPISVP 161
                         +NADFDGD++ VH P    ++ EA  ++ ++   + P  GDPI   
Sbjct: 265 NFFVLFFPLRDLCTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGDPIRAL 324

Query: 162 TQDMLIGLYVLTSGN 176
            Q +   LY +T G+
Sbjct: 325 IQVISALLYYITRGS 339


>Glyma11g02920.1 
          Length = 1385

 Score = 67.8 bits (164), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 17/189 (8%)

Query: 1   MLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQIFVIRGLIRQHL----------A 50
           +LGKR D S R+V+V  P L L   G+P  IA  L     +    R+ L           
Sbjct: 332 VLGKRNDSSLRTVVVGDPDLELSEVGIPCHIAESLQVSEYVNRQNREKLLYCCELRLLEK 391

Query: 51  SNIGVAK--SKI----REKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQ-PILVEG 103
             I V +  SK+    +E   I  +I + +  G  VL+NR P++H+  + A    +L   
Sbjct: 392 GKIDVCRNGSKVHLYKKEDLQIGDKIYRPLADGDKVLINRPPSIHQHSMIALTVRVLPIS 451

Query: 104 RAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQTEARLLMFSHMNLLSPAIGDPISVPTQ 163
             +C++PL C     DFDGD +  ++P S+ A+ E   L+     L++   G  +   +Q
Sbjct: 452 SVVCINPLCCSPLRGDFDGDCLHGYIPQSVTARIELNELVALDRQLINGQSGRNLLSLSQ 511

Query: 164 DMLIGLYVL 172
           D L   Y+L
Sbjct: 512 DSLTAAYLL 520


>Glyma13g26690.1 
          Length = 1820

 Score = 66.2 bits (160), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 52/181 (28%), Positives = 85/181 (46%), Gaps = 16/181 (8%)

Query: 8   YSGRSVIVVGPSLSLHRCGLPREIA--------IELFQIFVIRGLIRQHLASNI--GVAK 57
           +S R+VI       ++  G+P E+A        + +  I  ++ L+ +HL      GV+ 
Sbjct: 142 FSSRNVITGDCYKRINEVGIPVEVAQRITFEERVNIHNIRYLQKLVDEHLCLTYKEGVST 201

Query: 58  SKIRE--KEPIVWE----ILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPL 111
             +RE  K  I  +    + + +M G  V +NR PT H+  +QA    + E   + ++PL
Sbjct: 202 YSLREGSKGHIYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALYVYIHEDHTVKINPL 261

Query: 112 VCKGFNADFDGDQMAVHVPLSLEAQTEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYV 171
           +C    ADFDGD + +  P SL A+ E   L      LLS   G+     + D L+ L +
Sbjct: 262 ICGPLGADFDGDCVHLFYPQSLAAKAEVVELFAVENQLLSSHSGNLNLQLSTDSLLALKM 321

Query: 172 L 172
           L
Sbjct: 322 L 322


>Glyma01g42480.1 
          Length = 1376

 Score = 64.3 bits (155), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 57/193 (29%), Positives = 87/193 (45%), Gaps = 25/193 (12%)

Query: 1   MLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQI--FVIRG-------LIRQHLAS 51
           +LGKR D S R+V+V  P L L   G+P  IA E  Q+  +V R            HL  
Sbjct: 240 VLGKRNDSSFRTVVVGDPDLELSEIGIPCHIA-ESLQVSEYVNRQNREKLLYCCELHLLE 298

Query: 52  NIGVAKSKIREKEPIVWEILQEVMQ-----------GHPVLLNRAPTLHRLGIQAFQ-PI 99
                K  +  K  IV    +E +Q           G  VL+NR P++H+  + +    +
Sbjct: 299 K---GKINVCRKGSIVHLYKKEDLQIGDKFYRPLADGDKVLINRPPSIHQHSMISLTVRV 355

Query: 100 LVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQTEARLLMFSHMNLLSPAIGDPIS 159
           L     +C++PL C     DFDGD +  ++P S+ A+ E   L+     L++   G  + 
Sbjct: 356 LPISSVVCINPLCCSPLRGDFDGDCLHGYIPQSVTARIELNELVALDRQLINGQSGRNLL 415

Query: 160 VPTQDMLIGLYVL 172
             +QD L   Y+L
Sbjct: 416 SLSQDSLTAAYLL 428


>Glyma15g37710.1 
          Length = 2101

 Score = 63.2 bits (152), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 51/181 (28%), Positives = 84/181 (46%), Gaps = 16/181 (8%)

Query: 8   YSGRSVIVVGPSLSLHRCGLPREIA--------IELFQIFVIRGLIRQHLASNI--GVAK 57
           +S R+VI       ++  G+P E+A        + +  I  ++ L+ +HL      G + 
Sbjct: 326 FSSRNVITGDCYKRINEVGIPVEVAQRITFEERVNIHNIRYLQKLVDEHLCLTYKEGGST 385

Query: 58  SKIRE--KEPIVWE----ILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPL 111
             +RE  K  I  +    + + +M G  V +NR PT H+  +QA    + E   + ++PL
Sbjct: 386 YSLREGSKGHIYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALYVYIHEDHTVKINPL 445

Query: 112 VCKGFNADFDGDQMAVHVPLSLEAQTEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYV 171
           +C    ADFDGD + +  P SL A+ E   L      LLS   G+     + D L+ L +
Sbjct: 446 ICGPLGADFDGDCVHLFYPQSLAAKAEVVELFSVENQLLSSHSGNLNLQLSTDSLLSLKM 505

Query: 172 L 172
           L
Sbjct: 506 L 506