Jatropha Genome Database
- Jcr4S02936.20
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jcr4S02936.20
(588 letters)
Database: JAT_unigene
122,497 sequences; 49,272,789 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
contig00003 length=10213 numreads=756 gene=isogroup00001 sta... 1092 0.0
tissues_GDVQYP002GJ9MU 52 6e-06
>contig00003 length=10213 numreads=756 gene=isogroup00001
status=ig_thresh
Length = 10213
Score = 1092 bits (551), Expect = 0.0
Identities = 551/551 (100%)
Strand = Plus / Minus
Query: 1 atgcttggcaaacgggttgattattcggggcgttctgtcattgtcgtaggcccctcactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9532 atgcttggcaaacgggttgattattcggggcgttctgtcattgtcgtaggcccctcactt 9473
Query: 61 tcattacatcgatgtggattgcctcgcgaaatagcaatagagcttttccagatatttgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9472 tcattacatcgatgtggattgcctcgcgaaatagcaatagagcttttccagatatttgta 9413
Query: 121 attcgtggtctaattaggcaacatcttgcttcgaacataggagttgctaagagtaaaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9412 attcgtggtctaattaggcaacatcttgcttcgaacataggagttgctaagagtaaaatt 9353
Query: 181 cgggaaaaagaaccaattgtatgggaaatacttcaagaagttatgcagggacatccggta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9352 cgggaaaaagaaccaattgtatgggaaatacttcaagaagttatgcagggacatccggta 9293
Query: 241 ttactgaatagagcgccgactctgcatagattaggcatacaggcgttccaacccatttta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9292 ttactgaatagagcgccgactctgcatagattaggcatacaggcgttccaacccatttta 9233
Query: 301 gtggaaggccgtgctatttgtttacatccattggtttgtaagggattcaatgcagacttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9232 gtggaaggccgtgctatttgtttacatccattggtttgtaagggattcaatgcagacttt 9173
Query: 361 gatggggatcaaatggctgttcatgtacctttatcgttggaggctcaaacagaggctcgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9172 gatggggatcaaatggctgttcatgtacctttatcgttggaggctcaaacagaggctcgt 9113
Query: 421 ttacttatgttttctcatatgaatctcttgtctccagctattggagatcccatctccgta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9112 ttacttatgttttctcatatgaatctcttgtctccagctattggagatcccatctccgta 9053
Query: 481 ccaactcaagatatgcttattgggctctatgtattaacaagcgggaatcgtcgaggtatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9052 ccaactcaagatatgcttattgggctctatgtattaacaagcgggaatcgtcgaggtatt 8993
Query: 541 tgtgcaaatag 551
|||||||||||
Sbjct: 8992 tgtgcaaatag 8982
>tissues_GDVQYP002GJ9MU
Length = 331
Score = 52.0 bits (26), Expect = 6e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 510 tgtattaacaagcgggaatcgtcgaggtatttgt 543
|||||||||||| |||||| ||||||||||||||
Sbjct: 215 tgtattaacaagtgggaattgtcgaggtatttgt 248