Gene/Protein Characteristic Table for KIAA1272
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Product ID ORK04369
Accession No AB033098
Description Ral GTPase activating protein, alpha subunit 2 (catalytic)
Clone name hk07611
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (3902 bp)
Predicted protein sequence (1023 aa)
Source Human adult brain
Rouge ID mKIAA1272 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence
Description

Length: 3902 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq Warning No warning
Features of the protein sequence
Description

Length: 1023 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
ABC33805 0 100.0 akt substrate A...
Homo sapiens
CAI39939 0 99.9 novel protein [...
Homo sapiens
Q2PPJ7 0 99.9 250 kDa substra...
Homo sapiens
EAX10200 0 99.5 hCG22457, isofo...
Homo sapiens
XP_514544 0 99.5 similar to akt ...
Pan troglodytes
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
Entry Exp ID% HUGE_ID
AB007943 1.3e-12 28.5 KIAA0474
AB011117 2.1e-10 28.8 KIAA0545
AB007900 3.9e-10 28.7 KIAA0440
AB037810 2.3e-09 29.2 KIAA1389
AB028962 4.1e-09 31.2 KIAA1039
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR000331 852 1016 PF02145 Rap/ran-GAP
ProfileScan IPR000331 823 1023 PS50085 Rap/ran-GAP

Prediction of transmembrane (TM) segments
Method No. N terminal transmembrane region C terminal type length
SOSUI2 1 343 EYARCIAVCSLGVWICEELAQCT 365 SECONDARY 23
2 385 NKIVAQVACDVLQLLVSYWEKLQ 407 SECONDARY 23
3 445 VSLLLCLLDWCMALPVSVLLHPV 467 PRIMARY 23
Expression profile
Description

RT-PCR-ELISA
Experimental conditions
Primer_f GCCCTAGCATTTATTGGACCA
Primer_r CAGTAATGTGTTGGCAGTGCG
PCR conditions 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RH mapping information
Description

Chromosome No. 8
Experimental conditions
Panel name GeneBridge 4
Primer_f GCCCTAGCATTTATTGGACCA
Primer_r CAGTAATGTGTTGGCAGTGCG
PCR product length 148 bp
PCR conditions 95 °C15 sec64 °C60 sec30 cycles
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