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Gene/Protein Characteristic Table for KIAA0533

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Product ID	ORK05608
Accession No	AB011105
Description	laminin, alpha 5
Clone name	hg03784
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328, AmpR). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACG CGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
cDNA sequence	DNA sequence (5117 bp) Predicted protein sequence (1645 aa)
Source	Human adult brain
Rouge ID	mKIAA0533 by Kazusa Mouse cDNA Project

Length: 5117 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

Length: 1645 aa
Result of homology search against nr database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against HUGE database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
FPrintScan	IPR002049	31	49	PR00011	EGF-like
	IPR002049	74	92	PR00011	EGF-like
HMMPfam	IPR002049	20	64	PF00053	EGF-like
	IPR009254	141	401	PF06008	Laminin I
	IPR010307	582	712	PF06009	Laminin II
	IPR012680	920	1049	PF02210	Laminin G
	IPR012680	1103	1220	PF02210	Laminin G
	IPR012680	1320	1449	PF02210	Laminin G
	IPR012680	1499	1623	PF02210	Laminin G
HMMSmart	IPR002049	20	64	SM00180	EGF-like
	IPR002049	67	114	SM00180	EGF-like
	IPR001791	708	858	SM00282	Laminin G
	IPR001791	912	1049	SM00282	Laminin G
	IPR001791	1095	1220	SM00282	Laminin G
	IPR001791	1312	1449	SM00282	Laminin G
	IPR001791	1491	1623	SM00282	Laminin G
ProfileScan	IPR002049	1	19	PS50027	EGF-like
	IPR002049	20	66	PS50027	EGF-like
	IPR002049	67	116	PS50027	EGF-like
	IPR001791	686	879	PS50025	Laminin G
	IPR001791	891	1065	PS50025	Laminin G
	IPR001791	1074	1242	PS50025	Laminin G
	IPR001791	1290	1463	PS50025	Laminin G
	IPR001791	1470	1642	PS50025	Laminin G
ScanRegExp	IPR001368	1	40	PS00652	TNFR/CD27/30/40/95 cysteine-rich region
	IPR013032	20	31	PS00022	EGF-like region
	IPR013032	38	49	PS00022	EGF-like region
	IPR002049	38	69	PS01248	EGF-like
	IPR013032	81	92	PS00022	EGF-like region

RT-PCR

Experimental conditions

Chromosome No. 20
Experimental conditions

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