RBM15B ORF clone pFN21AE5686

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE5686

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Clone info.

Species

human

Clone Name

pFN21AE5686 Sequence (with vector) Restriction Map

Product ID

FHC13030

ORF Sequence

DNA sequence (1689 bp)
Protein sequence (563 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE5686

Symbol

RBM15B

Alias : HUMAGCGB, HsOTT3, OTT3

Description

RNA binding motif protein 15B

Original Clone ID

oc95686

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1689 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 563 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS33764.1 1.4e-134 99.8 RBM15B CCDS59198.1 4.1e-35 51.6 RBM15 CCDS822.1 4.1e-35 51.6 RBM15 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR000504 12 81 PF00076 RNA recognition motif domain IPR000504 93 153 PF00076 RNA recognition motif domain IPR012921 395 530 PF07744 Spen paralogue and orthologue SPOC HMMSmart IPR000504 11 83 SM00360 RNA recognition motif domain IPR000504 92 161 SM00360 RNA recognition motif domain ProfileScan IPR000504 10 87 PS50102 RNA recognition motif domain IPR000504 91 165 PS50102 RNA recognition motif domain IPR010912 384 562 PS50917 Spen paralogue/orthologue C-terminal
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_037418 890 612602 99.8 100.0 NP_001188474 969 606077 51.6 99.3 NP_073605 977 606077 51.6 99.3 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE5686 Download

>KIEE5686  1689 bp
ATGCCCGAGGATGACCAGCGGGCCACGCGCAACCTCTTCATTGGTAACCTGGACCACAGC
GTATCTGAGGTGGAGCTGCGAAGGGCCTTCGAGAAATATGGCATCATCGAGGAGGTGGTC
ATCAAGAGGCCTGCCCGTGGCCAGGGCGGTGCCTATGCCTTCCTCAAGTTCCAGAACCTG
GACATGGCCCATAGGGCTAAGGTGGCCATGTCGGGCCGAGTGATTGGTCGCAACCCCATT
AAGATAGGCTATGGCAAGGCCAACCCCACCACTCGTCTCTGGGTGGGTGGCCTGGGACCT
AACACGTCACTGGCGGCTCTGGCCCGAGAGTTTGACCGCTTTGGGAGCATTCGGACCATT
GATCACGTCAAAGGAGATAGCTTTGCCTATATTCAGTACGAGAGCTTGGACGCAGCCCAG
GCCGCCTGTGCTAAAATGAGGGGTTTTCCCTTGGGTGGACCAGACCGCAGGCTCCGCGTG
GATTTTGCCAAAGCAGAGGAGACTCGGTACCCCCAGCAGTACCAGCCCTCGCCACTCCCT
GTGCATTATGAGCTGCTCACAGATGGATACACCCGGCACCGCAACCTGGACGCCGACCTG
GTGCGGGACAGGACGCCCCCACACCTTCTGTACTCAGACCGAGACCGGACTTTTTTGGAA
GGGGACTGGACCAGCCCCAGTAAAAGCTCTGACCGCCGAAACAGCCTTGAGGGCTACAGT
CGCTCAGTGCGCAGCCGGAGTGGTGAGCGTTGGGGGGCAGATGGAGACCGTGGTTTGCCC
AAGCCCTGGGAAGAGAAGCGGAAACGGAGAAGCCTTTCCAGTGACCGTGGGAGGACAACC
CATTCACCATATGAGGAACGGAGTAGGACCAAGGGCAGTGGGCAGCAGTCAGAGCGGGGC
TCCGACCGCACCCCTGAGCGCAGCCGCAAGGAGAACCACTCCAGTGAAGGGACCAAGGAG
TCCAGCAGCAACTCCCTCAGCAACAGCAGACATGGGGCTGAGGAACGGGGCCACCACCAC
CACCACCACGAGGCTGCAGACTCTTCCCACGGGAAGAAGGCAAGAGACAGCGAGCGCAAT
CACCGGACCACAGAGGCCGAGCCCAAGCCTCTGGAAGAGCCAAAACACGAGACCAAAAAG
CTGAAGAATCTTTCAGAGTACGCTCAGACACTACAGCTGGGTTGGAATGGGCTTCTGGTG
TTGAAAAACAGCTGCTTCCCCACGTCTATGCATATCCTAGAGGGGGACCAGGGGGTGATC
AGCAGTCTCCTCAAAGACCACACTTCTGGGAGCAAGCTGACCCAGCTGAAGATCGCCCAG
CGCCTTCGACTGGACCAGCCCAAGCTTGACGAGGTCACACGACGCATCAAGCAGGGGAGC
CCCAACGGCTATGCGGTCCTCTTAGCCACCCAGGCAACCCCCAGTGGGCTTGGCACTGAG
GGGATGCCCACAGTAGAGCCCGGTCTGCAGAGGCGGCTTCTCAGGAACCTGGTCTCCTAC
TTGAAACAGAAGCAGGCCGCAGGGGTGATCAGCTTGCCAGTGGGGGGGTCCAAGGGCAGA
GACGGCACAGGCATGCTCTACGCCTTCCCACCCTGCGACTTTTCCCAGCAGTACCTCCAG
TCAGCACTAAGGACATTGGGCAAGCTAGAAGAAGAACACATGGTGATAGTCATCGTCAGA
GACACTGCC

ORF Protein

Cloned ORF protein sequence for pFN21AE5686 Download

>KIEE5686  563 aa
MPEDDQRATRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNL
DMAHRAKVAMSGRVIGRNPIKIGYGKANPTTRLWVGGLGPNTSLAALAREFDRFGSIRTI
DHVKGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFAKAEETRYPQQYQPSPLP
VHYELLTDGYTRHRNLDADLVRDRTPPHLLYSDRDRTFLEGDWTSPSKSSDRRNSLEGYS
RSVRSRSGERWGADGDRGLPKPWEEKRKRRSLSSDRGRTTHSPYEERSRTKGSGQQSERG
SDRTPERSRKENHSSEGTKESSSNSLSNSRHGAEERGHHHHHHEAADSSHGKKARDSERN
HRTTEAEPKPLEEPKHETKKLKNLSEYAQTLQLGWNGLLVLKNSCFPTSMHILEGDQGVI
SSLLKDHTSGSKLTQLKIAQRLRLDQPKLDEVTRRIKQGSPNGYAVLLATQATPSGLGTE
GMPTVEPGLQRRLLRNLVSYLKQKQAAGVISLPVGGSKGRDGTGMLYAFPPCDFSQQYLQ
SALRTLGKLEEEHMVIVIVRDTA

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE5686 Download

>pFN21AE5686  6394 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGCCCGAGGATGACCAGCGGGCCACGCGCAACCT
CTTCATTGGTAACCTGGACCACAGCGTATCTGAGGTGGAGCTGCGAAGGGCCTTCGAGAA
ATATGGCATCATCGAGGAGGTGGTCATCAAGAGGCCTGCCCGTGGCCAGGGCGGTGCCTA
TGCCTTCCTCAAGTTCCAGAACCTGGACATGGCCCATAGGGCTAAGGTGGCCATGTCGGG
CCGAGTGATTGGTCGCAACCCCATTAAGATAGGCTATGGCAAGGCCAACCCCACCACTCG
TCTCTGGGTGGGTGGCCTGGGACCTAACACGTCACTGGCGGCTCTGGCCCGAGAGTTTGA
CCGCTTTGGGAGCATTCGGACCATTGATCACGTCAAAGGAGATAGCTTTGCCTATATTCA
GTACGAGAGCTTGGACGCAGCCCAGGCCGCCTGTGCTAAAATGAGGGGTTTTCCCTTGGG
TGGACCAGACCGCAGGCTCCGCGTGGATTTTGCCAAAGCAGAGGAGACTCGGTACCCCCA
GCAGTACCAGCCCTCGCCACTCCCTGTGCATTATGAGCTGCTCACAGATGGATACACCCG
GCACCGCAACCTGGACGCCGACCTGGTGCGGGACAGGACGCCCCCACACCTTCTGTACTC
AGACCGAGACCGGACTTTTTTGGAAGGGGACTGGACCAGCCCCAGTAAAAGCTCTGACCG
CCGAAACAGCCTTGAGGGCTACAGTCGCTCAGTGCGCAGCCGGAGTGGTGAGCGTTGGGG
GGCAGATGGAGACCGTGGTTTGCCCAAGCCCTGGGAAGAGAAGCGGAAACGGAGAAGCCT
TTCCAGTGACCGTGGGAGGACAACCCATTCACCATATGAGGAACGGAGTAGGACCAAGGG
CAGTGGGCAGCAGTCAGAGCGGGGCTCCGACCGCACCCCTGAGCGCAGCCGCAAGGAGAA
CCACTCCAGTGAAGGGACCAAGGAGTCCAGCAGCAACTCCCTCAGCAACAGCAGACATGG
GGCTGAGGAACGGGGCCACCACCACCACCACCACGAGGCTGCAGACTCTTCCCACGGGAA
GAAGGCAAGAGACAGCGAGCGCAATCACCGGACCACAGAGGCCGAGCCCAAGCCTCTGGA
AGAGCCAAAACACGAGACCAAAAAGCTGAAGAATCTTTCAGAGTACGCTCAGACACTACA
GCTGGGTTGGAATGGGCTTCTGGTGTTGAAAAACAGCTGCTTCCCCACGTCTATGCATAT
CCTAGAGGGGGACCAGGGGGTGATCAGCAGTCTCCTCAAAGACCACACTTCTGGGAGCAA
GCTGACCCAGCTGAAGATCGCCCAGCGCCTTCGACTGGACCAGCCCAAGCTTGACGAGGT
CACACGACGCATCAAGCAGGGGAGCCCCAACGGCTATGCGGTCCTCTTAGCCACCCAGGC
AACCCCCAGTGGGCTTGGCACTGAGGGGATGCCCACAGTAGAGCCCGGTCTGCAGAGGCG
GCTTCTCAGGAACCTGGTCTCCTACTTGAAACAGAAGCAGGCCGCAGGGGTGATCAGCTT
GCCAGTGGGGGGGTCCAAGGGCAGAGACGGCACAGGCATGCTCTACGCCTTCCCACCCTG
CGACTTTTCCCAGCAGTACCTCCAGTCAGCACTAAGGACATTGGGCAAGCTAGAAGAAGA
ACACATGGTGATAGTCATCGTCAGAGACACTGCCGTTTAAACGAATTCGGGCTCGGTACC
CGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCC
GAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGG
CGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGA
ATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACC
ATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTT
CAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATC
GAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTG
ACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAG
ACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAA
ATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATAT
TGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCG
GCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAA
GATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTT
GAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGT
GGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTAT
TCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATG
ACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTA
CTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGAT
CATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAG
CGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAA
CTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCA
GGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCC
GGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGT
ATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATC
GCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACG
CCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATA
ACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCG
CGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCT
CAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAA
GCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTC
TCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGT
AGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCG
CCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGG
CAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCT
TGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGC
TGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCG
CTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTC
AAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTT
AAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCG
GAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGG
CAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTC
ATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTT
TTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGA
TTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCG
GCCACGATGCGTCCGGCGTAGAGGATCGAGATCT