KCNS1 ORF clone pFN21AE4128

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Halotag ORF Clone pFN21AE4128

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Clone info.

Species

human

Clone Name

pFN21AE4128 Sequence (with vector) Restriction Map

Product ID

FHC27027

ORF Sequence

DNA sequence (1578 bp)
Protein sequence (526 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE4128

Symbol

KCNS1

Alias : Kv9.1

Description

potassium voltage-gated channel, modifier subfamily S, member 1

Original Clone ID

cp94128

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1578 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 526 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS13342.1 9.9e-218 99.8 KCNS1 CCDS6279.1 7.2e-54 51.5 KCNS2 CCDS1809.1 1.2e-49 35.5 KCNG3 CCDS8535.1 2.3e-40 31.6 KCNA1 CCDS826.1 1.8e-37 29.7 KCNA10 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR003971 55 67 PR01494 Potassium channel IPR003971 70 86 PR01494 Potassium channel IPR003971 93 106 PR01494 Potassium channel IPR003091 101 120 PR00169 Voltage-dependent potassium channel IPR003968 101 111 PR01491 Potassium channel IPR003971 117 132 PR01494 Potassium channel IPR003971 140 152 PR01494 Potassium channel IPR003091 213 241 PR00169 Voltage-dependent potassium channel IPR003971 226 238 PR01494 Potassium channel IPR003091 274 297 PR00169 Voltage-dependent potassium channel IPR003091 300 320 PR00169 Voltage-dependent potassium channel IPR003091 346 372 PR00169 Voltage-dependent potassium channel IPR003968 351 359 PR01491 Potassium channel IPR003091 375 398 PR00169 Voltage-dependent potassium channel IPR003968 375 389 PR01491 Potassium channel IPR003091 405 427 PR00169 Voltage-dependent potassium channel IPR003091 434 460 PR00169 Voltage-dependent potassium channel IPR003971 444 462 PR01494 Potassium channel IPR003968 445 456 PR01491 Potassium channel HMMPfam IPR003131 52 151 PF02214 Potassium channel IPR005821 275 456 PF00520 Ion transport HMMSmart IPR000210 50 159 SM00225 BTB/POZ-like
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 219 SKLFSCVSISVVLASIAAMCIHS 241 PRIMARY 23 2 275 LEYFCIAWFSFEVSSRLLLAPST 297 SECONDARY 23 3 304 PLNLIDIVSVLPFYLTLLAGVAL 326 SECONDARY 23 4 374 REVGILLLYLAVGVSVFSGVAYT 396 PRIMARY 23 5 403 VGFNTIPACWWWGTVSMTTVGYG 425 SECONDARY 23 6 432 VAGKLAASGCILGGILVVALPIT 454 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_002242 526 602905 99.8 100.0 NP_001309728 526 602905 99.8 100.0 XP_016883335 527 602905 99.8 95.2 NP_065748 477 602906 51.5 89.5 NP_579875 436 606767 35.5 83.1 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE4128 Download

>KIEE4128  1578 bp
ATGCTGATGCTGCTGGTCCGGGGAACACACTATGAGAACCTCCGGTCTAAAGTGGTGCTG
CCAACACCCCTAGGAGGGAGGAGCACTGAAACCTTTGTGAGCGAGTTCCCGGGCCCCGAC
ACCGGGATCCGCTGGCGGCGAAGCGACGAGGCGCTGCGCGTGAACGTGGGTGGCGTGCGG
CGGCAGCTGAGCGCGCGCGCCCTGGCGCGCTTCCCGGGCACGCGGCTGGGCCGCCTGCAG
GCCGCGGCGTCGGAGGAGCAGGCGCGGCGCCTGTGCGACGACTACGACGAGGCGGCGCGC
GAATTCTACTTCGACCGGCACCCGGGCTTCTTCCTGAGCCTGCTGCACTTCTACCGCACT
GGCCACCTGCACGTGCTCGACGAGCTGTGCGTCTTCGCCTTTGGCCAGGAGGCCGACTAC
TGGGGCCTAGGCGAGAACGCGCTTGCCGCGTGCTGCCGCGCGCGCTACCTGGAGAGGCGG
CTGACCCAGCCGCACGCCTGGGACGAGGACAGCGACACGCCGAGCAGCGTGGACCCGTGC
CCCGACGAGATCTCCGACGTGCAGCGAGAACTGGCGCGCTATGGCGCGGCGCGCTGTGGC
CGCCTGCGCCGCCGCCTCTGGCTGACCATGGAGAACCCGGGCTACTCGCTGCCGAGCAAG
CTCTTCAGCTGCGTCTCCATCAGCGTGGTGCTCGCCTCCATCGCCGCCATGTGCATCCAC
AGCCTGCCCGAGTACCAGGCCCGCGAGGCGGCGGCCGCCGTGGCTGCGGTGGCCGCGGGC
CGCAGCCCGGAAGGCGTGCGCGACGACCCGGTGCTGCGACGCCTCGAGTACTTCTGCATC
GCCTGGTTCAGCTTCGAGGTGTCGTCGCGCCTCCTGCTGGCGCCCAGTACGCGCAACTTC
TTCTGCCACCCGCTCAACCTCATCGACATTGTGTCTGTGCTGCCCTTCTATCTCACGCTG
CTGGCTGGTGTGGCACTGGGCGACCAGGGCGGCAAGGAGTTCGGCCACCTGGGCAAGGTG
GTGCAGGTGTTCCGCCTCATGCGCATCTTCCGCGTACTCAAGTTGGCGCGCCATTCCACC
GGGCTGCGCTCGCTGGGAGCCACGCTCAAGCACAGCTACCGTGAGGTGGGCATCTTGCTG
CTGTACCTGGCTGTGGGTGTGTCAGTGTTCTCTGGTGTGGCCTACACAGCTGAAAAGGAG
GAGGACGTGGGCTTTAACACCATCCCAGCCTGCTGGTGGTGGGGCACAGTGAGCATGACC
ACCGTGGGCTATGGGGATGTGGTGCCAGTGACGGTGGCTGGCAAGCTGGCAGCCTCAGGC
TGCATCCTAGGGGGCATCCTGGTGGTAGCACTCCCCATCACCATCATCTTCAACAAGTTC
TCCCACTTCTACCGGCGCCAGAAGGCTCTGGAGGCAGCCGTGCGCAACAGCAACCACCAA
GAGTTTGAGGACTTGCTGAGCAGCGTTGATGGGGTGTCGGAGGCATCTCTGGAGACATCC
CGAGAAACCTCTCAGGAGGGACAGTCTGCAGATCTAGAGAGCCAGGCCCCCAGTGAGCCT
CCACACCCTCAGATGTAT

ORF Protein

Cloned ORF protein sequence for pFN21AE4128 Download

>KIEE4128  526 aa
MLMLLVRGTHYENLRSKVVLPTPLGGRSTETFVSEFPGPDTGIRWRRSDEALRVNVGGVR
RQLSARALARFPGTRLGRLQAAASEEQARRLCDDYDEAAREFYFDRHPGFFLSLLHFYRT
GHLHVLDELCVFAFGQEADYWGLGENALAACCRARYLERRLTQPHAWDEDSDTPSSVDPC
PDEISDVQRELARYGAARCGRLRRRLWLTMENPGYSLPSKLFSCVSISVVLASIAAMCIH
SLPEYQAREAAAAVAAVAAGRSPEGVRDDPVLRRLEYFCIAWFSFEVSSRLLLAPSTRNF
FCHPLNLIDIVSVLPFYLTLLAGVALGDQGGKEFGHLGKVVQVFRLMRIFRVLKLARHST
GLRSLGATLKHSYREVGILLLYLAVGVSVFSGVAYTAEKEEDVGFNTIPACWWWGTVSMT
TVGYGDVVPVTVAGKLAASGCILGGILVVALPITIIFNKFSHFYRRQKALEAAVRNSNHQ
EFEDLLSSVDGVSEASLETSRETSQEGQSADLESQAPSEPPHPQMY

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE4128 Download

>pFN21AE4128  6283 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGCTGATGCTGCTGGTCCGGGGAACACACTATGA
GAACCTCCGGTCTAAAGTGGTGCTGCCAACACCCCTAGGAGGGAGGAGCACTGAAACCTT
TGTGAGCGAGTTCCCGGGCCCCGACACCGGGATCCGCTGGCGGCGAAGCGACGAGGCGCT
GCGCGTGAACGTGGGTGGCGTGCGGCGGCAGCTGAGCGCGCGCGCCCTGGCGCGCTTCCC
GGGCACGCGGCTGGGCCGCCTGCAGGCCGCGGCGTCGGAGGAGCAGGCGCGGCGCCTGTG
CGACGACTACGACGAGGCGGCGCGCGAATTCTACTTCGACCGGCACCCGGGCTTCTTCCT
GAGCCTGCTGCACTTCTACCGCACTGGCCACCTGCACGTGCTCGACGAGCTGTGCGTCTT
CGCCTTTGGCCAGGAGGCCGACTACTGGGGCCTAGGCGAGAACGCGCTTGCCGCGTGCTG
CCGCGCGCGCTACCTGGAGAGGCGGCTGACCCAGCCGCACGCCTGGGACGAGGACAGCGA
CACGCCGAGCAGCGTGGACCCGTGCCCCGACGAGATCTCCGACGTGCAGCGAGAACTGGC
GCGCTATGGCGCGGCGCGCTGTGGCCGCCTGCGCCGCCGCCTCTGGCTGACCATGGAGAA
CCCGGGCTACTCGCTGCCGAGCAAGCTCTTCAGCTGCGTCTCCATCAGCGTGGTGCTCGC
CTCCATCGCCGCCATGTGCATCCACAGCCTGCCCGAGTACCAGGCCCGCGAGGCGGCGGC
CGCCGTGGCTGCGGTGGCCGCGGGCCGCAGCCCGGAAGGCGTGCGCGACGACCCGGTGCT
GCGACGCCTCGAGTACTTCTGCATCGCCTGGTTCAGCTTCGAGGTGTCGTCGCGCCTCCT
GCTGGCGCCCAGTACGCGCAACTTCTTCTGCCACCCGCTCAACCTCATCGACATTGTGTC
TGTGCTGCCCTTCTATCTCACGCTGCTGGCTGGTGTGGCACTGGGCGACCAGGGCGGCAA
GGAGTTCGGCCACCTGGGCAAGGTGGTGCAGGTGTTCCGCCTCATGCGCATCTTCCGCGT
ACTCAAGTTGGCGCGCCATTCCACCGGGCTGCGCTCGCTGGGAGCCACGCTCAAGCACAG
CTACCGTGAGGTGGGCATCTTGCTGCTGTACCTGGCTGTGGGTGTGTCAGTGTTCTCTGG
TGTGGCCTACACAGCTGAAAAGGAGGAGGACGTGGGCTTTAACACCATCCCAGCCTGCTG
GTGGTGGGGCACAGTGAGCATGACCACCGTGGGCTATGGGGATGTGGTGCCAGTGACGGT
GGCTGGCAAGCTGGCAGCCTCAGGCTGCATCCTAGGGGGCATCCTGGTGGTAGCACTCCC
CATCACCATCATCTTCAACAAGTTCTCCCACTTCTACCGGCGCCAGAAGGCTCTGGAGGC
AGCCGTGCGCAACAGCAACCACCAAGAGTTTGAGGACTTGCTGAGCAGCGTTGATGGGGT
GTCGGAGGCATCTCTGGAGACATCCCGAGAAACCTCTCAGGAGGGACAGTCTGCAGATCT
AGAGAGCCAGGCCCCCAGTGAGCCTCCACACCCTCAGATGTATGTTTAAACGAATTCGGG
CTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTA
ACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAAC
CCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACC
ACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTA
TTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATG
TTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGT
GGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCC
CAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATG
GTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTA
TTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTT
CAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCC
TTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAA
GATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGT
AAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTT
CTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGC
ATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACG
GATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCG
GCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAAC
ATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCA
AACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTA
ACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGAT
AAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAA
TCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAG
CCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAAT
AGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGAC
CAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAAT
CAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTA
AAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAA
ATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTC
CCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGT
CCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCA
GTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCG
ACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTAT
CGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTA
CAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCT
GCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAAC
AAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAA
AAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAA
ACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTT
TATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCAT
GAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCA
TAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTG
TTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACA
ATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGC
AGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT