TBC1D13 ORF clone pFN21AE4074

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE4074

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Clone info.

Species

human

Clone Name

pFN21AE4074 Sequence (with vector) Restriction Map

Product ID

FHC11154

ORF Sequence

DNA sequence (1200 bp)
Protein sequence (400 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE4074

Symbol

TBC1D13

Description

TBC1 domain family, member 13, transcript variant 1

Original Clone ID

cp94074

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1200 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 400 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS6911.1 1.6e-175 100.0 TBC1D13 CCDS69677.1 6e-76 68.8 TBC1D13 CCDS33714.1 7.5e-12 26.8 TBC1D5 CCDS46770.1 7.7e-12 26.8 TBC1D5 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR000195 210 367 PF00566 Rab-GAP/TBC domain HMMSmart IPR000195 32 370 SM00164 Rab-GAP/TBC domain ProfileScan IPR000195 35 345 PS50086 Rab-GAP/TBC domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_060671 400 616218 100.0 100.0 XP_005252117 324 616218 100.0 81.0 NP_001273701 275 616218 68.8 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE4074 Download

>KIEE4074  1200 bp
ATGTCAAGTCTGCACAAGAGCCGAATTGCAGATTTCCAGGATGTCCTGAAGGAGCCCTCA
ATTGCATTGGAAAAGCTGCGGGAACTCAGCTTTAGTGGCATCCCCTGTGAGGGCGGACTG
CGGTGCCTCTGCTGGAAGATTCTCTTGAACTACCTTCCCTTGGAGAGAGCCTCATGGACC
TCCATCCTGGCCAAGCAGAGGGAGCTGTATGCCCAGTTCCTGAGGGAAATGATCATCCAG
CCTGGCATTGCCAAGGCCAACATGGGTGTGTCCAGGGAGGATGTGACTTTTGAGGACCAT
CCACTCAACCCCAACCCTGACAGCCGGTGGAACACGTACTTCAAGGACAACGAGGTGCTG
CTGCAGATCGACAAAGATGTCCGGAGGTTGTGCCCAGACATTTCCTTCTTCCAGAGGGCC
ACTGACTACCCTTGCCTCCTCATCCTGGACCCCCAGAATGAGTTTGAAACCCTTCGTAAG
AGAGTGGAACAGACAACACTGAAATCTCAGACGGTGGCCCGGAACCGGAGTGGGGTCACA
AATATGAGCTCCCCACACAAGAACTCTGTGCCATCATCCCTAAATGAGTATGAGGTGCTG
CCCAATGGCTGTGAGGCCCACTGGGAGGTGGTGGAGCGGATCCTGTTCATCTACGCCAAG
CTCAACCCTGGCATCGCTTATGTGCAAGGCATGAATGAAATCGTGGGGCCCCTCTACTAC
ACCTTTGCCACCGACCCCAATAGTGAGTGGAAAGAGCACGCCGAGGCAGACACCTTTTTC
TGCTTCACCAACCTCATGGCCGAGATCCGGGACAACTTTATCAAGAGCCTGGATGACTCG
CAGTGTGGCATCACCTACAAGATGGAGAAGGTTTACTCCACCTTGAAAGATAAGGATGTG
GAGCTCTACCTGAAACTGCAAGAGCAGAACATCAAGCCTCAGTTCTTTGCCTTCCGCTGG
CTGACACTGCTGCTGTCCCAGGAGTTCTTGCTGCCTGACGTCATCCGCATCTGGGACTCC
CTCTTCGCCGATGACAACCGCTTTGACTTCCTCCTCCTCGTCTGCTGCGCCATGCTCATG
CTGATCCGGGAGCAGTTGCTGGAAGGGGACTTCACTGTGAATATGCGGCTGCTGCAGGAC
TACCCCATCACAGATGTCTGCCAGATCCTGCAGAAAGCCAAGGAGCTCCAAGACTCAAAG

ORF Protein

Cloned ORF protein sequence for pFN21AE4074 Download

>KIEE4074  400 aa
MSSLHKSRIADFQDVLKEPSIALEKLRELSFSGIPCEGGLRCLCWKILLNYLPLERASWT
SILAKQRELYAQFLREMIIQPGIAKANMGVSREDVTFEDHPLNPNPDSRWNTYFKDNEVL
LQIDKDVRRLCPDISFFQRATDYPCLLILDPQNEFETLRKRVEQTTLKSQTVARNRSGVT
NMSSPHKNSVPSSLNEYEVLPNGCEAHWEVVERILFIYAKLNPGIAYVQGMNEIVGPLYY
TFATDPNSEWKEHAEADTFFCFTNLMAEIRDNFIKSLDDSQCGITYKMEKVYSTLKDKDV
ELYLKLQEQNIKPQFFAFRWLTLLLSQEFLLPDVIRIWDSLFADDNRFDFLLLVCCAMLM
LIREQLLEGDFTVNMRLLQDYPITDVCQILQKAKELQDSK

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE4074 Download

>pFN21AE4074  5905 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGTCAAGTCTGCACAAGAGCCGAATTGCAGATTT
CCAGGATGTCCTGAAGGAGCCCTCAATTGCATTGGAAAAGCTGCGGGAACTCAGCTTTAG
TGGCATCCCCTGTGAGGGCGGACTGCGGTGCCTCTGCTGGAAGATTCTCTTGAACTACCT
TCCCTTGGAGAGAGCCTCATGGACCTCCATCCTGGCCAAGCAGAGGGAGCTGTATGCCCA
GTTCCTGAGGGAAATGATCATCCAGCCTGGCATTGCCAAGGCCAACATGGGTGTGTCCAG
GGAGGATGTGACTTTTGAGGACCATCCACTCAACCCCAACCCTGACAGCCGGTGGAACAC
GTACTTCAAGGACAACGAGGTGCTGCTGCAGATCGACAAAGATGTCCGGAGGTTGTGCCC
AGACATTTCCTTCTTCCAGAGGGCCACTGACTACCCTTGCCTCCTCATCCTGGACCCCCA
GAATGAGTTTGAAACCCTTCGTAAGAGAGTGGAACAGACAACACTGAAATCTCAGACGGT
GGCCCGGAACCGGAGTGGGGTCACAAATATGAGCTCCCCACACAAGAACTCTGTGCCATC
ATCCCTAAATGAGTATGAGGTGCTGCCCAATGGCTGTGAGGCCCACTGGGAGGTGGTGGA
GCGGATCCTGTTCATCTACGCCAAGCTCAACCCTGGCATCGCTTATGTGCAAGGCATGAA
TGAAATCGTGGGGCCCCTCTACTACACCTTTGCCACCGACCCCAATAGTGAGTGGAAAGA
GCACGCCGAGGCAGACACCTTTTTCTGCTTCACCAACCTCATGGCCGAGATCCGGGACAA
CTTTATCAAGAGCCTGGATGACTCGCAGTGTGGCATCACCTACAAGATGGAGAAGGTTTA
CTCCACCTTGAAAGATAAGGATGTGGAGCTCTACCTGAAACTGCAAGAGCAGAACATCAA
GCCTCAGTTCTTTGCCTTCCGCTGGCTGACACTGCTGCTGTCCCAGGAGTTCTTGCTGCC
TGACGTCATCCGCATCTGGGACTCCCTCTTCGCCGATGACAACCGCTTTGACTTCCTCCT
CCTCGTCTGCTGCGCCATGCTCATGCTGATCCGGGAGCAGTTGCTGGAAGGGGACTTCAC
TGTGAATATGCGGCTGCTGCAGGACTACCCCATCACAGATGTCTGCCAGATCCTGCAGAA
AGCCAAGGAGCTCCAAGACTCAAAGGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCC
TCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAG
CTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTT
CGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGA
AAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGC
TGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAG
ATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAA
TGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATC
CGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGT
GGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCA
AATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGG
AAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGC
CTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTG
GGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTT
CGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTA
TTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAAT
GACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGA
GAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACA
ACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACT
CGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACC
ACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACT
CTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTT
CTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGT
GGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTT
ATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATA
GGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGG
TATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAA
AGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGG
CGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGA
GGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCG
TGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGG
GAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTC
GCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCG
GTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCA
CTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGT
GGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAG
TTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCG
GTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATC
CTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTT
TGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAG
GAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAG
TGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTA
AAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTC
TGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAA
ATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATG
CGTCCGGCGTAGAGGATCGAGATCT