KCNV1 ORF clone pFN21AE3929

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE3929

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Clone info.

Species

human

Clone Name

pFN21AE3929 Sequence (with vector) Restriction Map

Product ID

FHC10231

ORF Sequence

DNA sequence (1500 bp)
Protein sequence (500 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE3929

Symbol

KCNV1

Alias : HNKA, KCNB3, KV2.3, KV8.1

Description

potassium channel, voltage gated modifier subfamily V, member 1

Original Clone ID

cp93929

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1500 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 500 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS6314.1 2e-200 99.8 KCNV1 CCDS6209.1 1.3e-75 46.4 KCNB2 CCDS13418.1 6.9e-74 45.9 KCNB1 CCDS1676.1 1.4e-51 37.7 KCNF1 CCDS12019.1 4e-47 37.7 KCNG2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR003970 26 40 PR01493 Potassium channel IPR003970 46 61 PR01493 Potassium channel IPR003970 85 99 PR01493 Potassium channel IPR003091 100 119 PR00169 Voltage-dependent potassium channel IPR003968 100 110 PR01491 Potassium channel IPR003970 120 133 PR01493 Potassium channel IPR003970 135 153 PR01493 Potassium channel IPR003970 154 167 PR01493 Potassium channel IPR003970 175 193 PR01493 Potassium channel IPR003091 203 231 PR00169 Voltage-dependent potassium channel IPR003091 244 267 PR00169 Voltage-dependent potassium channel IPR003091 270 290 PR00169 Voltage-dependent potassium channel IPR003091 316 342 PR00169 Voltage-dependent potassium channel IPR003968 321 329 PR01491 Potassium channel IPR003091 345 368 PR00169 Voltage-dependent potassium channel IPR003968 345 359 PR01491 Potassium channel IPR003091 376 398 PR00169 Voltage-dependent potassium channel IPR003091 405 431 PR00169 Voltage-dependent potassium channel IPR003968 416 427 PR01491 Potassium channel IPR003970 432 442 PR01493 Potassium channel IPR003970 472 485 PR01493 Potassium channel HMMPfam IPR003131 42 150 PF02214 Potassium channel IPR005821 244 427 PF00520 Ion transport HMMSmart IPR000210 39 157 SM00225 BTB/POZ-like
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 208 AARIFGVISIIFVVVSIINMALM 230 PRIMARY 23 2 241 LLEILEYVCISWFTGEFVLRFLC 263 SECONDARY 23 3 274 VPNIIDLLAILPFYITLLVESLS 296 SECONDARY 23 4 341 QCYEEVGLLLLFLSVGISIFSTV 363 PRIMARY 23 5 404 TGKIVAFMCILSGILVLALPIAI 426 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_055194 500 608164 99.8 100.0 NP_004761 911 607738 46.4 91.0 XP_006723847 858 600397,616056 45.9 91.0 XP_011527101 858 600397,616056 45.9 91.0 NP_004966 858 600397,616056 45.9 91.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE3929 Download

>KIEE3929  1500 bp
ATGCCTTCCAGCGGCAGAGCGCTGCTGGACTCGCCGCTGGACAGCGGCTCCCTGACCTCC
CTGGGCTCTAGTGTCTTCTGCAGCGAGGGTGAAGGGGAGCCCTTGGCGCTCGGGGACTGC
TTCACGGTCAACGTGGGCGGCAGCCGCTTCGTGCTCTCGCAGCAGGCGCTGTCCTGCTTC
CCGCACACGCGCCTTGGCAAGCTGGCCGTGGTGGTGGCTTCCTACCGCCGCCCCGGGGCC
CTGGCCGCCGTGCCCAGCCCTCTGGAGCTTTGCGACGATGCCAACCCCGTGGACAACGAG
TACTTCTTCGACCGCAGCTCGCAGGCGTTCCGATATGTCCTGCACTACTACCGCACCGGC
CGCCTGCATGTCATGGAGCAGCTGTGCGCGCTCTCCTTCCTGCAGGAGATCCAGTACTGG
GGCATCGATGAGCTCAGCATCGATTCCTGCTGCAGGGACAGATACTTCAGAAGGAAAGAG
CTGAGTGAAACTTTAGACTTCAAGAAGGACACAGAAGACCAGGAAAGTCAACATGAGAGT
GAACAGGACTTCTCCCAAGGACCTTGTCCCACTGTTCGCCAGAAGCTCTGGAATATCCTG
GAGAAACCTGGATCTTCCACAGCTGCCCGTATCTTTGGCGTCATCTCCATTATCTTCGTG
GTGGTGTCCATCATTAACATGGCCCTGATGTCAGCTGAGTTAAGCTGGCTGGACCTGCAG
CTGCTGGAAATCCTGGAGTATGTGTGCATTAGCTGGTTCACCGGGGAGTTTGTCCTCCGC
TTCCTGTGTGTGCGGGACAGGTGTCGCTTCCTAAGAAAGGTGCCAAACATCATAGACCTC
CTTGCCATCTTGCCCTTCTACATCACTCTTCTGGTAGAGAGCCTAAGTGGGAGCCAGACC
ACGCAGGAGCTGGAGAACGTGGGGCGCATTGTCCAGGTGTTGAGGCTGCTCAGGGCTCTG
CGCATGCTAAAGCTGGGCAGACATTCCACAGGATTACGCTCCCTTGGGATGACAATCACC
CAGTGTTACGAAGAAGTCGGCCTACTGCTCCTATTTCTATCCGTGGGAATCTCTATATTT
TCAACTGTAGAATACTTTGCTGAGCAAAGCATTCCTGACACAACCTTCACAAGTGTCCCT
TGTGCATGGTGGTGGGCCACCACCTCTATGACTACTGTGGGATATGGGGACATTAGACCA
GACACCACCACAGGCAAAATCGTGGCCTTCATGTGTATATTATCGGGAATTCTTGTCTTG
GCCTTGCCTATTGCTATTATTAACGATCGCTTCTCTGCTTGCTACTTCACCTTGAAACTC
AAGGAAGCAGCTGTTAGACAGCGTGAAGCCCTAAAGAAGCTTACCAAGAATATAGCCACT
GACTCATATATCAGTGTTAACTTGAGAGATGTCTATGCCCGGAGTATCATGGAGATGCTG
CGACTGAAAGGCAGAGAAAGAGCAAGTACTAGGAGCAGCGGGGGAGATGATTTCTGGTTT

ORF Protein

Cloned ORF protein sequence for pFN21AE3929 Download

>KIEE3929  500 aa
MPSSGRALLDSPLDSGSLTSLGSSVFCSEGEGEPLALGDCFTVNVGGSRFVLSQQALSCF
PHTRLGKLAVVVASYRRPGALAAVPSPLELCDDANPVDNEYFFDRSSQAFRYVLHYYRTG
RLHVMEQLCALSFLQEIQYWGIDELSIDSCCRDRYFRRKELSETLDFKKDTEDQESQHES
EQDFSQGPCPTVRQKLWNILEKPGSSTAARIFGVISIIFVVVSIINMALMSAELSWLDLQ
LLEILEYVCISWFTGEFVLRFLCVRDRCRFLRKVPNIIDLLAILPFYITLLVESLSGSQT
TQELENVGRIVQVLRLLRALRMLKLGRHSTGLRSLGMTITQCYEEVGLLLLFLSVGISIF
STVEYFAEQSIPDTTFTSVPCAWWWATTSMTTVGYGDIRPDTTTGKIVAFMCILSGILVL
ALPIAIINDRFSACYFTLKLKEAAVRQREALKKLTKNIATDSYISVNLRDVYARSIMEML
RLKGRERASTRSSGGDDFWF

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE3929 Download

>pFN21AE3929  6205 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGCCTTCCAGCGGCAGAGCGCTGCTGGACTCGCC
GCTGGACAGCGGCTCCCTGACCTCCCTGGGCTCTAGTGTCTTCTGCAGCGAGGGTGAAGG
GGAGCCCTTGGCGCTCGGGGACTGCTTCACGGTCAACGTGGGCGGCAGCCGCTTCGTGCT
CTCGCAGCAGGCGCTGTCCTGCTTCCCGCACACGCGCCTTGGCAAGCTGGCCGTGGTGGT
GGCTTCCTACCGCCGCCCCGGGGCCCTGGCCGCCGTGCCCAGCCCTCTGGAGCTTTGCGA
CGATGCCAACCCCGTGGACAACGAGTACTTCTTCGACCGCAGCTCGCAGGCGTTCCGATA
TGTCCTGCACTACTACCGCACCGGCCGCCTGCATGTCATGGAGCAGCTGTGCGCGCTCTC
CTTCCTGCAGGAGATCCAGTACTGGGGCATCGATGAGCTCAGCATCGATTCCTGCTGCAG
GGACAGATACTTCAGAAGGAAAGAGCTGAGTGAAACTTTAGACTTCAAGAAGGACACAGA
AGACCAGGAAAGTCAACATGAGAGTGAACAGGACTTCTCCCAAGGACCTTGTCCCACTGT
TCGCCAGAAGCTCTGGAATATCCTGGAGAAACCTGGATCTTCCACAGCTGCCCGTATCTT
TGGCGTCATCTCCATTATCTTCGTGGTGGTGTCCATCATTAACATGGCCCTGATGTCAGC
TGAGTTAAGCTGGCTGGACCTGCAGCTGCTGGAAATCCTGGAGTATGTGTGCATTAGCTG
GTTCACCGGGGAGTTTGTCCTCCGCTTCCTGTGTGTGCGGGACAGGTGTCGCTTCCTAAG
AAAGGTGCCAAACATCATAGACCTCCTTGCCATCTTGCCCTTCTACATCACTCTTCTGGT
AGAGAGCCTAAGTGGGAGCCAGACCACGCAGGAGCTGGAGAACGTGGGGCGCATTGTCCA
GGTGTTGAGGCTGCTCAGGGCTCTGCGCATGCTAAAGCTGGGCAGACATTCCACAGGATT
ACGCTCCCTTGGGATGACAATCACCCAGTGTTACGAAGAAGTCGGCCTACTGCTCCTATT
TCTATCCGTGGGAATCTCTATATTTTCAACTGTAGAATACTTTGCTGAGCAAAGCATTCC
TGACACAACCTTCACAAGTGTCCCTTGTGCATGGTGGTGGGCCACCACCTCTATGACTAC
TGTGGGATATGGGGACATTAGACCAGACACCACCACAGGCAAAATCGTGGCCTTCATGTG
TATATTATCGGGAATTCTTGTCTTGGCCTTGCCTATTGCTATTATTAACGATCGCTTCTC
TGCTTGCTACTTCACCTTGAAACTCAAGGAAGCAGCTGTTAGACAGCGTGAAGCCCTAAA
GAAGCTTACCAAGAATATAGCCACTGACTCATATATCAGTGTTAACTTGAGAGATGTCTA
TGCCCGGAGTATCATGGAGATGCTGCGACTGAAAGGCAGAGAAAGAGCAAGTACTAGGAG
CAGCGGGGGAGATGATTTCTGGTTTGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCC
TCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAG
CTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTT
CGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGA
AAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGC
TGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAG
ATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAA
TGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATC
CGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGT
GGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCA
AATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGG
AAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGC
CTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTG
GGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTT
CGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTA
TTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAAT
GACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGA
GAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACA
ACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACT
CGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACC
ACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACT
CTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTT
CTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGT
GGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTT
ATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATA
GGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGG
TATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAA
AGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGG
CGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGA
GGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCG
TGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGG
GAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTC
GCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCG
GTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCA
CTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGT
GGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAG
TTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCG
GTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATC
CTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTT
TGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAG
GAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAG
TGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTA
AAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTC
TGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAA
ATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATG
CGTCCGGCGTAGAGGATCGAGATCT