TULP1 ORF clone pFN21AE3684

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE3684

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Clone info.

Species

human

Clone Name

pFN21AE3684 Sequence (with vector) Restriction Map

Product ID

FHC11104

ORF Sequence

DNA sequence (1467 bp)
Protein sequence (489 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE3684

Symbol

TULP1

Alias : LCA15, RP14, TUBL1

Description

tubby like protein 1, transcript variant 2

Original Clone ID

oc93684

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1467 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 489 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS75436.1 2.9e-96 99.8 TULP1 CCDS4807.1 2.3e-83 89.6 TULP1 CCDS7787.1 3.8e-37 48.6 TUB CCDS7786.1 4.1e-37 48.1 TUB CCDS8519.1 4.1e-33 56.6 TULP3 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000007 297 313 PR01573 Tubby IPR000007 313 337 PR01573 Tubby IPR000007 347 374 PR01573 Tubby IPR000007 408 425 PR01573 Tubby IPR000007 426 442 PR01573 Tubby IPR000007 446 465 PR01573 Tubby IPR000007 467 489 PR01573 Tubby HMMPfam IPR000007 245 483 PF01167 Tubby
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001276324 489 600132,602280,613843 99.8 100.0 NP_003313 542 600132,602280,613843 89.6 95.7 NP_813977 506 601197,616188 48.6 97.8 XP_011518646 518 601197,616188 48.8 96.7 XP_005253166 548 601197,616188 48.8 97.8 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE3684 Download

>KIEE3684  1467 bp
ATGCCTCTGCGGGATGAAACCCTCCGAGAGGTGTGGGCCTCTGACAGTGGGCATGAAGAA
GAAAGCCTGAGCCCGGAGGCCCCGCGGCGCCCCAAACAGCGACCCGCCCCGGCACAGAGG
CTAAGGAAGAAGAGGACGGAGGCCCCCGAATCCCCCTGCCCCACGGGATCCAAGCCCCGG
AAGCCCGGAGAGGAGGAGGAGGAAGAGGAGGACGAGGAGGACGAGGAAGAGGAGGCAGAG
GAAAAGAAAGAGAAAATCCTTCTGCCTCCCAAGAAGCCCCTGAGAGAGAAGAGCTCCGCA
GACCTGAAGGAGAGGAGGGCCAAGGCCCAGGGCCCAAGGGGAGACCTGGGAAGCCCTGAC
CCCCCACCGAAACCTCTGCGTGTTAGGAATAAGGAAGCTCCAGCAGGGGAGGGGACCAAG
ATGAGAAAGACCAAGAAGAAAGGGTCTGGGGAGGCCGACAAGGACCCCTCAGGGAGCCCA
GCCAGTGCGAGGAAGAGCCCAGCAGCCATGTTTCTGGTTGGGGAAGGCAGTCCTGACAAG
AAAGCCCTGAAGAAGAAAGGCACTCCCAAAGGCGCGAGGAAGGAGGAAGAAGAGGAGGAG
GAGGCAGCTACGGTGATAAAGAACAGCAATCAAAAGGGCAAAGCCAAAGGAAAAGGCAAA
AAGAAAGCGAAGGAGGAGAGGGCCCCGTCTCCCCCCGTGGAGGTGGACGAACCCCGGGAG
TTTGTGCTCCGGCCTGCCCCCCAGGGCCGCACGGTGCGCTGCCGGCTGACCCGGGACAAA
AAGGGCATGGATCGAGGCATGTATCCCTCCTACTTCCTGCACCTGGACACGGAGAAGAAG
GTGTTCCTCTTGGCTGGCAGGAAACGAAAACGGAGCAAGACAGCCAATTACCTCATCTCC
ATCGACCCTACCAATCTGTCCCGAGGAGGGGAGAATTTCATCGGGAAGCTGAGGTCCAAC
CTCCTGGGGAACCGCTTCACGGTCTTTGACAACGGGCAGAACCCACAGCGTGGGTACAGC
ACTAATGTGGCAAGCCTTCGGCAGGAGCTGGCAGCTGTGATCTATGAAACCAACGTGCTG
GGCTTCCGTGGCCCCCGGCGCATGACCGTCATCATTCCTGGCATGAGTGCGGAGAACGAG
AGGGTCCCCATCCGGCCCCGAAATGCTAGTGACGGCCTGCTGGTGCGCTGGCAGAACAAG
ACGCTGGAGAGCCTCATAGAACTGCACAACAAGCCACCTGTCTGGAACGATGACAGTGGC
TCCTACACCCTCAACTTCCAAGGCCGGGTCACCCAGGCCTCAGTCAAGAACTTCCAGATT
GTCCACGCTGATGACCCCGACTATATCGTGCTGCAGTTCGGCCGCGTGGCGGAGGACGCC
TTCACCCTAGACTACCGGTACCCGCTGTGCGCCCTGCAGGCCTTCGCCATCGCCCTCTCC
AGTTTCGACGGGAAGCTGGCCTGCGAG

ORF Protein

Cloned ORF protein sequence for pFN21AE3684 Download

>KIEE3684  489 aa
MPLRDETLREVWASDSGHEEESLSPEAPRRPKQRPAPAQRLRKKRTEAPESPCPTGSKPR
KPGEEEEEEEDEEDEEEEAEEKKEKILLPPKKPLREKSSADLKERRAKAQGPRGDLGSPD
PPPKPLRVRNKEAPAGEGTKMRKTKKKGSGEADKDPSGSPASARKSPAAMFLVGEGSPDK
KALKKKGTPKGARKEEEEEEEAATVIKNSNQKGKAKGKGKKKAKEERAPSPPVEVDEPRE
FVLRPAPQGRTVRCRLTRDKKGMDRGMYPSYFLHLDTEKKVFLLAGRKRKRSKTANYLIS
IDPTNLSRGGENFIGKLRSNLLGNRFTVFDNGQNPQRGYSTNVASLRQELAAVIYETNVL
GFRGPRRMTVIIPGMSAENERVPIRPRNASDGLLVRWQNKTLESLIELHNKPPVWNDDSG
SYTLNFQGRVTQASVKNFQIVHADDPDYIVLQFGRVAEDAFTLDYRYPLCALQAFAIALS
SFDGKLACE

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE3684 Download

>pFN21AE3684  6172 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGCCTCTGCGGGATGAAACCCTCCGAGAGGTGTG
GGCCTCTGACAGTGGGCATGAAGAAGAAAGCCTGAGCCCGGAGGCCCCGCGGCGCCCCAA
ACAGCGACCCGCCCCGGCACAGAGGCTAAGGAAGAAGAGGACGGAGGCCCCCGAATCCCC
CTGCCCCACGGGATCCAAGCCCCGGAAGCCCGGAGAGGAGGAGGAGGAAGAGGAGGACGA
GGAGGACGAGGAAGAGGAGGCAGAGGAAAAGAAAGAGAAAATCCTTCTGCCTCCCAAGAA
GCCCCTGAGAGAGAAGAGCTCCGCAGACCTGAAGGAGAGGAGGGCCAAGGCCCAGGGCCC
AAGGGGAGACCTGGGAAGCCCTGACCCCCCACCGAAACCTCTGCGTGTTAGGAATAAGGA
AGCTCCAGCAGGGGAGGGGACCAAGATGAGAAAGACCAAGAAGAAAGGGTCTGGGGAGGC
CGACAAGGACCCCTCAGGGAGCCCAGCCAGTGCGAGGAAGAGCCCAGCAGCCATGTTTCT
GGTTGGGGAAGGCAGTCCTGACAAGAAAGCCCTGAAGAAGAAAGGCACTCCCAAAGGCGC
GAGGAAGGAGGAAGAAGAGGAGGAGGAGGCAGCTACGGTGATAAAGAACAGCAATCAAAA
GGGCAAAGCCAAAGGAAAAGGCAAAAAGAAAGCGAAGGAGGAGAGGGCCCCGTCTCCCCC
CGTGGAGGTGGACGAACCCCGGGAGTTTGTGCTCCGGCCTGCCCCCCAGGGCCGCACGGT
GCGCTGCCGGCTGACCCGGGACAAAAAGGGCATGGATCGAGGCATGTATCCCTCCTACTT
CCTGCACCTGGACACGGAGAAGAAGGTGTTCCTCTTGGCTGGCAGGAAACGAAAACGGAG
CAAGACAGCCAATTACCTCATCTCCATCGACCCTACCAATCTGTCCCGAGGAGGGGAGAA
TTTCATCGGGAAGCTGAGGTCCAACCTCCTGGGGAACCGCTTCACGGTCTTTGACAACGG
GCAGAACCCACAGCGTGGGTACAGCACTAATGTGGCAAGCCTTCGGCAGGAGCTGGCAGC
TGTGATCTATGAAACCAACGTGCTGGGCTTCCGTGGCCCCCGGCGCATGACCGTCATCAT
TCCTGGCATGAGTGCGGAGAACGAGAGGGTCCCCATCCGGCCCCGAAATGCTAGTGACGG
CCTGCTGGTGCGCTGGCAGAACAAGACGCTGGAGAGCCTCATAGAACTGCACAACAAGCC
ACCTGTCTGGAACGATGACAGTGGCTCCTACACCCTCAACTTCCAAGGCCGGGTCACCCA
GGCCTCAGTCAAGAACTTCCAGATTGTCCACGCTGATGACCCCGACTATATCGTGCTGCA
GTTCGGCCGCGTGGCGGAGGACGCCTTCACCCTAGACTACCGGTACCCGCTGTGCGCCCT
GCAGGCCTTCGCCATCGCCCTCTCCAGTTTCGACGGGAAGCTGGCCTGCGAGGTTTAAAC
GAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATC
CGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAAC
TAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTT
GGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCT
ATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATT
CATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTC
TACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTC
CAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTC
TACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCT
ATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGA
TAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCC
CTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTG
AAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTC
AACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACT
TTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTC
GGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAG
CATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGAT
AACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTT
TTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAA
GCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGC
AAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATG
GAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATT
GCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCA
GATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGAT
GAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAA
ATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTAT
CCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCA
GGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGC
ATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACC
AGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCG
GATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTA
GGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCG
TTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGAC
ACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAG
GCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTAT
TTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGAT
CCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGC
GCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGT
GGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCT
AGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGG
TGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCT
CTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCG
GGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCG
GTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAG
ATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT