CDK5RAP3 ORF clone pFN21AE3223

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE3223

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Clone info.

Species

human

Clone Name

pFN21AE3223 Sequence (with vector) Restriction Map

Product ID

FHC29850

ORF Sequence

DNA sequence (1518 bp)
Protein sequence (506 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE3223

Symbol

CDK5RAP3

Alias : C53, HSF-27, IC53, LZAP, MST016, OK/SW-cl.114, PP1553

Description

CDK5 regulatory subunit associated protein 3, transcript variant 3

Original Clone ID

cp93223

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1518 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 506 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS42356.1 6.8e-177 100.0 CDK5RAP3 CCDS62232.1 3.4e-176 99.8 CDK5RAP3 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR008491 1 503 PF05600 Protein of unknown function DUF773
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_788276 506 608202 100.0 100.0 XP_011523599 531 608202 99.8 99.8 NP_001265126 531 608202 99.8 99.8 XP_016880655 413 608202 100.0 81.6 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE3223 Download

>KIEE3223  1518 bp
ATGGAGGACCATCAGCACGTGCCCATCGACATCCAGACCAGCAAGCTGCTCGATTGGCTG
GTGGACAGAAGGCACTGCAGCCTGAAATGGCAGAGTCTGGTGCTGACGATCCGCGAGAAG
ATCAATGCTGCCATCCAGGACATGCCAGAGAGCGAAGAGATCGCCCAGCTGCTGTCTGGG
TCCTACATTCACTACTTTCACTGCCTAAGAATCCTGGACCTTCTCAAAGGCACAGAGGCC
TCCACGAAGAATATTTTTGGCCGATACTCTTCACAGCGGATGAAGGATTGGCAGGAGATT
ATAGCTCTGTATGAGAAGGACAACACCTACTTAGTGGAACTCTCTAGCCTCCTGGTTCGG
AATGTCAACTATGAGATCCCCTCACTGAAGAAGCAGATTGCCAAGTGCCAGCAGCTGCAG
CAAGAATACAGCCGCAAGGAGGAGGAGTGCCAGGCAGGGGCTGCCGAGATGCGGGAGCAG
TTCTACCACTCCTGCAAGCAGTATGGCATCACGGGCGAAAATGTCCGAGGAGAACTGCTG
GCCCTGGTGAAGGACCTGCCGAGTCAGCTGGCTGAGATTGGGGCAGCGGCTCAGCAGTCC
CTGGGGGAAGCCATTGACGTGTACCAGGCGTCTGTGGGGTTTGTGTGTGAGAGCCCCACA
GAGCAGGTGTTGCCAATGCTGCGGTTCGTGCAGAAGCGGGGAAACTCAACGGTGTACGAG
TGGAGGACAGGGACAGAGCCCTCTGTGGTGGAACGACCCCACCTCGAGGAGCTTCCTGAG
CAGGTGGCAGAAGATGCGATTGACTGGGGCGACTTTGGGGTAGAGGCAGTGTCTGAGGGG
ACTGACTCTGGCATCTCTGCCGAGGCTGCTGGAATCGACTGGGGCATCTTCCCGGAATCA
GATTCAAAGGATCCTGGAGGTGATGGGATAGACTGGGGAGACGATGCTGTTGCTTTGCAG
ATCACAGTGCTGGAAGCAGGAACCCAGGCTCCAGAAGGTGTTGCCAGGGGCCCAGATGCC
CTGACACTGCTTGAATACACTGAGACCCGGAATCAGTTCCTTGATGAGCTCATGGAGCTT
GAGATCTTCTTAGCCCAGAGAGCAGTGGAGTTGAGTGAGGAGGCAGATGTCCTGTCTGTG
AGCCAGTTCCAGCTGGCTCCAGCCATCCTGCAGGGCCAGACCAAAGAGAAGATGGTTACC
ATGGTGTCAGTGCTGGAGGATCTGATTGGCAAGCTTACCAGTCTTCAGCTGCAACACCTG
TTTATGATCCTGGCCTCACCAAGGTATGTGGACCGAGTGACTGAATTCCTCCAGCAAAAG
CTGAAGCAGTCCCAGCTGCTGGCTTTGAAGAAAGAGCTGATGGTGCAGAAGCAGCAGGAG
GCACTTGAGGAGCAGGCGGCTCTGGAGCCTAAGCTGGACCTGCTACTGGAGAAGACCAAG
GAGCTGCAGAAGCTGATTGAAGCTGACATCTCCAAGAGGTACAGCGGGCGCCCTGTGAAC
CTGATGGGAACCTCTCTG

ORF Protein

Cloned ORF protein sequence for pFN21AE3223 Download

>KIEE3223  506 aa
MEDHQHVPIDIQTSKLLDWLVDRRHCSLKWQSLVLTIREKINAAIQDMPESEEIAQLLSG
SYIHYFHCLRILDLLKGTEASTKNIFGRYSSQRMKDWQEIIALYEKDNTYLVELSSLLVR
NVNYEIPSLKKQIAKCQQLQQEYSRKEEECQAGAAEMREQFYHSCKQYGITGENVRGELL
ALVKDLPSQLAEIGAAAQQSLGEAIDVYQASVGFVCESPTEQVLPMLRFVQKRGNSTVYE
WRTGTEPSVVERPHLEELPEQVAEDAIDWGDFGVEAVSEGTDSGISAEAAGIDWGIFPES
DSKDPGGDGIDWGDDAVALQITVLEAGTQAPEGVARGPDALTLLEYTETRNQFLDELMEL
EIFLAQRAVELSEEADVLSVSQFQLAPAILQGQTKEKMVTMVSVLEDLIGKLTSLQLQHL
FMILASPRYVDRVTEFLQQKLKQSQLLALKKELMVQKQQEALEEQAALEPKLDLLLEKTK
ELQKLIEADISKRYSGRPVNLMGTSL

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE3223 Download

>pFN21AE3223  6223 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGAGGACCATCAGCACGTGCCCATCGACATCCA
GACCAGCAAGCTGCTCGATTGGCTGGTGGACAGAAGGCACTGCAGCCTGAAATGGCAGAG
TCTGGTGCTGACGATCCGCGAGAAGATCAATGCTGCCATCCAGGACATGCCAGAGAGCGA
AGAGATCGCCCAGCTGCTGTCTGGGTCCTACATTCACTACTTTCACTGCCTAAGAATCCT
GGACCTTCTCAAAGGCACAGAGGCCTCCACGAAGAATATTTTTGGCCGATACTCTTCACA
GCGGATGAAGGATTGGCAGGAGATTATAGCTCTGTATGAGAAGGACAACACCTACTTAGT
GGAACTCTCTAGCCTCCTGGTTCGGAATGTCAACTATGAGATCCCCTCACTGAAGAAGCA
GATTGCCAAGTGCCAGCAGCTGCAGCAAGAATACAGCCGCAAGGAGGAGGAGTGCCAGGC
AGGGGCTGCCGAGATGCGGGAGCAGTTCTACCACTCCTGCAAGCAGTATGGCATCACGGG
CGAAAATGTCCGAGGAGAACTGCTGGCCCTGGTGAAGGACCTGCCGAGTCAGCTGGCTGA
GATTGGGGCAGCGGCTCAGCAGTCCCTGGGGGAAGCCATTGACGTGTACCAGGCGTCTGT
GGGGTTTGTGTGTGAGAGCCCCACAGAGCAGGTGTTGCCAATGCTGCGGTTCGTGCAGAA
GCGGGGAAACTCAACGGTGTACGAGTGGAGGACAGGGACAGAGCCCTCTGTGGTGGAACG
ACCCCACCTCGAGGAGCTTCCTGAGCAGGTGGCAGAAGATGCGATTGACTGGGGCGACTT
TGGGGTAGAGGCAGTGTCTGAGGGGACTGACTCTGGCATCTCTGCCGAGGCTGCTGGAAT
CGACTGGGGCATCTTCCCGGAATCAGATTCAAAGGATCCTGGAGGTGATGGGATAGACTG
GGGAGACGATGCTGTTGCTTTGCAGATCACAGTGCTGGAAGCAGGAACCCAGGCTCCAGA
AGGTGTTGCCAGGGGCCCAGATGCCCTGACACTGCTTGAATACACTGAGACCCGGAATCA
GTTCCTTGATGAGCTCATGGAGCTTGAGATCTTCTTAGCCCAGAGAGCAGTGGAGTTGAG
TGAGGAGGCAGATGTCCTGTCTGTGAGCCAGTTCCAGCTGGCTCCAGCCATCCTGCAGGG
CCAGACCAAAGAGAAGATGGTTACCATGGTGTCAGTGCTGGAGGATCTGATTGGCAAGCT
TACCAGTCTTCAGCTGCAACACCTGTTTATGATCCTGGCCTCACCAAGGTATGTGGACCG
AGTGACTGAATTCCTCCAGCAAAAGCTGAAGCAGTCCCAGCTGCTGGCTTTGAAGAAAGA
GCTGATGGTGCAGAAGCAGCAGGAGGCACTTGAGGAGCAGGCGGCTCTGGAGCCTAAGCT
GGACCTGCTACTGGAGAAGACCAAGGAGCTGCAGAAGCTGATTGAAGCTGACATCTCCAA
GAGGTACAGCGGGCGCCCTGTGAACCTGATGGGAACCTCTCTGGTTTAAACGAATTCGGG
CTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTA
ACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAAC
CCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACC
ACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTA
TTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATG
TTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGT
GGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCC
CAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATG
GTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTA
TTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTT
CAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCC
TTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAA
GATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGT
AAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTT
CTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGC
ATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACG
GATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCG
GCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAAC
ATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCA
AACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTA
ACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGAT
AAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAA
TCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAG
CCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAAT
AGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGAC
CAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAAT
CAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTA
AAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAA
ATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTC
CCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGT
CCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCA
GTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCG
ACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTAT
CGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTA
CAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCT
GCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAAC
AAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAA
AAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAA
ACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTT
TATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCAT
GAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCA
TAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTG
TTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACA
ATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGC
AGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT