ZSCAN30 ORF clone pFN21AE3217

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Halotag ORF Clone pFN21AE3217

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Clone info.

Species

human

Clone Name

pFN21AE3217 Sequence (with vector) Restriction Map

Product ID

FHC29873

ORF Sequence

DNA sequence (1482 bp)
Protein sequence (494 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE3217

Symbol

ZSCAN30

Alias : ZNF-WYM, ZNF397OS, ZNF917

Description

zinc finger and SCAN domain containing 30, transcript variant 2

Original Clone ID

cp93217

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1482 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 494 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS42427.1 1.4e-125 99.8 ZSCAN30 CCDS74207.1 5.3e-77 99.7 ZSCAN30 CCDS5681.1 4.6e-48 45.9 ZSCAN21 CCDS12975.1 1.2e-44 42.7 ZSCAN22 CCDS56407.1 6.9e-38 41.5 ZSCAN9 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR003309 43 136 PF02023 Transcription regulator SCAN IPR007087 301 323 PF00096 Zinc finger IPR007087 329 351 PF00096 Zinc finger IPR007087 385 407 PF00096 Zinc finger IPR007087 441 463 PF00096 Zinc finger IPR007087 469 491 PF00096 Zinc finger HMMSmart IPR003309 44 154 SM00431 Transcription regulator SCAN IPR015880 301 323 SM00355 Zinc finger IPR015880 329 351 SM00355 Zinc finger IPR015880 357 379 SM00355 Zinc finger IPR015880 385 407 SM00355 Zinc finger IPR015880 413 435 SM00355 Zinc finger IPR015880 441 463 SM00355 Zinc finger IPR015880 469 491 SM00355 Zinc finger ProfileScan IPR003309 48 130 PS50804 Transcription regulator SCAN IPR007087 301 328 PS50157 Zinc finger IPR007087 329 356 PS50157 Zinc finger IPR007087 357 384 PS50157 Zinc finger IPR007087 385 412 PS50157 Zinc finger IPR007087 413 440 PS50157 Zinc finger IPR007087 441 468 PS50157 Zinc finger IPR007087 469 494 PS50157 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_005250625 473 601261 45.9 99.2 NP_666019 473 601261 45.9 99.2 XP_006716176 473 601261 45.9 99.2 XP_016868073 473 601261 45.9 99.2 NP_001308045 491 165260 42.7 97.6 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE3217 Download

>KIEE3217  1482 bp
ATGTCAGGAGAGGCCACAGTCTTGGCCTACCATGCTCCAGAAGAACAGGAAGGACTTCTA
GTTGTCAAGGTTGAAGAAGAAAATTATGTTTTGGACCAGGACTTTGGCCTTCAGGAAAAC
CCCTGGAGCCAAGAGGTATTCCGGCAGAAGTTCAGGCAGTTTAGTTACTCTGACTCCACT
GGCCCTCGGGAGGCTCTGAGCCGGCTGCGAGAGCTTTGCTGTCAGTGGTTGAGGCCGGAG
GTGCACTCCAAGGAGCAGATCCTGGAGCTGCTGATGTTGGAGCAGTTCCTGGCCATCCTT
CCTGAGGAGCTGCAAGCTTGGCTGCGAGAGCATCGGCCAGAGAATGGAGAGGAAGCTGTG
ACTATGCTGGAGGAGCTGGAAAAAGAACTGGAGGAGCCAAGGCAACAGGACACAACTCAT
GGCCAAGAAATGTTCTGGCAGGAAATGACATCCACAGGAGCACTGAAGTCTCTGTCTCTG
AATAGCCCGGTGCAGCCCTTAGAGAACCAGTGCAAGACTGAGACTCAGGAGTCCCAGGCT
TTCCAGGAGAGAGATGGCAGGATGGTGGCTGGCAAAGTGTTGATGGCAAAGCAAGAAATT
GTTGAATGTGTAGCCTCAGCAGCTATGATATCGCCGGGAAAACTTCCTGGAGAAACACAT
TCCCAACGGATAGCTGAAGAAGCTTTGGGAGGTCTGGACAACTCTAAGAAGCCAAAGGGA
AATGCTGCAGGGAACAAAATCAGTCAGCTTCCTTCCCAGGACAGACATTTCAGTCTGGCA
ACCTTCAACAGAAGAATCCCCACGGAACACAGTGTCCTTGAATCTCATGAGAGTGAAGGA
AGTTTCAGTATGAATTCAAATGATATTACACAACAGAGCGTTGACACTAGGGAAAAGCTC
TATGAGTGCTTTGACTGTGGGAAGGCCTTTTGCCAGAGCTCAAAGCTGATTAGACATCAG
AGAATTCATACTGGAGAGAGACCTTATGCATGTAAAGAATGTGGCAAAGCCTTCAGTTTG
AGCTCAGACCTTGTTAGACATCAGAGAATTCATAGTGGTGAAAAACCCTATGAATGTTGT
GAATGTGGAAAAGCCTTCAGGGGCAGTTCAGAGCTCATCAGGCATCGGAGAATCCACACT
GGAGAGAAGCCTTATGAATGTGGAGAATGTGGGAAGGCCTTCAGCCGGAGCTCAGCCCTT
ATTCAGCATAAGAAAATTCACACTGGAGATAAAAGCTATGAATGTATTGCATGTGGTAAG
GCTTTTGGTAGGAGTTCTATCCTTATTGAACATCAAAGAATTCACACTGGAGAGAAACCT
TATGAATGTAATGAATGTGGAAAATCCTTCAATCAGAGCTCAGCCCTCACCCAGCACCAG
AGAATTCACACTGGAGAGAAGCCTTATGAATGTAGTGAATGTAGAAAAACATTTAGGCAT
AGGTCAGGCCTTATGCAGCATCAGAGAACACACACCAGAGTT

ORF Protein

Cloned ORF protein sequence for pFN21AE3217 Download

>KIEE3217  494 aa
MSGEATVLAYHAPEEQEGLLVVKVEEENYVLDQDFGLQENPWSQEVFRQKFRQFSYSDST
GPREALSRLRELCCQWLRPEVHSKEQILELLMLEQFLAILPEELQAWLREHRPENGEEAV
TMLEELEKELEEPRQQDTTHGQEMFWQEMTSTGALKSLSLNSPVQPLENQCKTETQESQA
FQERDGRMVAGKVLMAKQEIVECVASAAMISPGKLPGETHSQRIAEEALGGLDNSKKPKG
NAAGNKISQLPSQDRHFSLATFNRRIPTEHSVLESHESEGSFSMNSNDITQQSVDTREKL
YECFDCGKAFCQSSKLIRHQRIHTGERPYACKECGKAFSLSSDLVRHQRIHSGEKPYECC
ECGKAFRGSSELIRHRRIHTGEKPYECGECGKAFSRSSALIQHKKIHTGDKSYECIACGK
AFGRSSILIEHQRIHTGEKPYECNECGKSFNQSSALTQHQRIHTGEKPYECSECRKTFRH
RSGLMQHQRTHTRV

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE3217 Download

>pFN21AE3217  6187 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGTCAGGAGAGGCCACAGTCTTGGCCTACCATGC
TCCAGAAGAACAGGAAGGACTTCTAGTTGTCAAGGTTGAAGAAGAAAATTATGTTTTGGA
CCAGGACTTTGGCCTTCAGGAAAACCCCTGGAGCCAAGAGGTATTCCGGCAGAAGTTCAG
GCAGTTTAGTTACTCTGACTCCACTGGCCCTCGGGAGGCTCTGAGCCGGCTGCGAGAGCT
TTGCTGTCAGTGGTTGAGGCCGGAGGTGCACTCCAAGGAGCAGATCCTGGAGCTGCTGAT
GTTGGAGCAGTTCCTGGCCATCCTTCCTGAGGAGCTGCAAGCTTGGCTGCGAGAGCATCG
GCCAGAGAATGGAGAGGAAGCTGTGACTATGCTGGAGGAGCTGGAAAAAGAACTGGAGGA
GCCAAGGCAACAGGACACAACTCATGGCCAAGAAATGTTCTGGCAGGAAATGACATCCAC
AGGAGCACTGAAGTCTCTGTCTCTGAATAGCCCGGTGCAGCCCTTAGAGAACCAGTGCAA
GACTGAGACTCAGGAGTCCCAGGCTTTCCAGGAGAGAGATGGCAGGATGGTGGCTGGCAA
AGTGTTGATGGCAAAGCAAGAAATTGTTGAATGTGTAGCCTCAGCAGCTATGATATCGCC
GGGAAAACTTCCTGGAGAAACACATTCCCAACGGATAGCTGAAGAAGCTTTGGGAGGTCT
GGACAACTCTAAGAAGCCAAAGGGAAATGCTGCAGGGAACAAAATCAGTCAGCTTCCTTC
CCAGGACAGACATTTCAGTCTGGCAACCTTCAACAGAAGAATCCCCACGGAACACAGTGT
CCTTGAATCTCATGAGAGTGAAGGAAGTTTCAGTATGAATTCAAATGATATTACACAACA
GAGCGTTGACACTAGGGAAAAGCTCTATGAGTGCTTTGACTGTGGGAAGGCCTTTTGCCA
GAGCTCAAAGCTGATTAGACATCAGAGAATTCATACTGGAGAGAGACCTTATGCATGTAA
AGAATGTGGCAAAGCCTTCAGTTTGAGCTCAGACCTTGTTAGACATCAGAGAATTCATAG
TGGTGAAAAACCCTATGAATGTTGTGAATGTGGAAAAGCCTTCAGGGGCAGTTCAGAGCT
CATCAGGCATCGGAGAATCCACACTGGAGAGAAGCCTTATGAATGTGGAGAATGTGGGAA
GGCCTTCAGCCGGAGCTCAGCCCTTATTCAGCATAAGAAAATTCACACTGGAGATAAAAG
CTATGAATGTATTGCATGTGGTAAGGCTTTTGGTAGGAGTTCTATCCTTATTGAACATCA
AAGAATTCACACTGGAGAGAAACCTTATGAATGTAATGAATGTGGAAAATCCTTCAATCA
GAGCTCAGCCCTCACCCAGCACCAGAGAATTCACACTGGAGAGAAGCCTTATGAATGTAG
TGAATGTAGAAAAACATTTAGGCATAGGTCAGGCCTTATGCAGCATCAGAGAACACACAC
CAGAGTTGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAG
GCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCA
CCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGA
TACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGT
GAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAAC
AACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTA
AGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTT
GCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTC
TGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAAT
GTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATG
AGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAA
CATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCAC
CCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTAC
ATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTT
CCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCC
GGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCA
CCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCC
ATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAG
GAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAA
CCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATG
GCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAA
TTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCG
GCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATT
GCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGT
CAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAG
CATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGG
CGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAG
GCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCC
GCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAG
GACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGA
CCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTC
ATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTG
TGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGT
CCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCA
GAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACA
CTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAG
TTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCA
AGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGG
GGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAA
AAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGC
CCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAA
TGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGAT
TGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCT
GAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCC
CTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATC
GAGATCT