RAB40B ORF clone pFN21AE3109

KOP
KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE3109

How to Order Order Information

Clone info.

Species

human

Clone Name

pFN21AE3109 Sequence (with vector) Restriction Map

Product ID

FHC26234

ORF Sequence

DNA sequence (834 bp)
Protein sequence (278 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE3109

Symbol

RAB40B

Alias : RAR, SEC4L

Description

RAB40B, member RAS oncogene family

Original Clone ID

cp93109

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 834 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 278 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS11816.1 6.8e-116 100.0 RAB40B CCDS35353.1 5e-101 88.8 RAB40AL CCDS35357.1 3.3e-99 88.1 RAB40A CCDS10413.1 1.8e-96 78.6 RAB40C CCDS76691.1 2e-27 44.0 RAB15 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR001806 15 36 PR00449 Ras GTPase IPR001806 56 78 PR00449 Ras GTPase IPR001806 117 130 PR00449 Ras GTPase IPR001806 152 174 PR00449 Ras GTPase HMMPfam IPR013753 16 174 PF00071 Ras IPR001496 189 223 PF07525 SOCS protein HMMSmart IPR003577 12 177 SM00173 Ras small GTPase IPR003579 15 177 SM00175 Ras small GTPase IPR003578 17 177 SM00174 Small GTPase IPR002041 20 218 SM00176 Ran GTPase IPR001496 183 226 SM00253 SOCS protein IPR001496 189 225 SM00969 SOCS protein HMMTigr IPR005225 16 163 TIGR00231 Small GTP-binding protein domain ProfileScan IPR020851 10 207 PS51419 Small GTPase IPR001496 175 228 PS50225 SOCS protein
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001027004 278 300405 88.8 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE3109 Download

>KIEE3109  834 bp
ATGAGCGCCCTGGGCAGCCCGGTCCGGGCCTACGACTTTCTGCTCAAGTTCCTGCTGGTG
GGCGACAGCGACGTGGGCAAGGGCGAGATCCTGGCGAGCCTGCAGGATGGCGCGGCCGAG
TCCCCGTACGGCCACCCGGCGGGCATCGACTACAAGACGACCACCATCCTGCTGGACGGG
CGGCGGGTGAAGCTGCAGCTCTGGGATACTTCAGGCCAGGGAAGATTTTGTACCATATTC
CGCTCCTACTCCCGGGGCGCACAGGGTGTGATCCTGGTCTATGACATTGCGAACCGCTGG
TCTTTTGACGGCATTGATCGATGGATTAAGGAGATCGATGAGCATGCCCCCGGAGTCCCC
AAGATCCTGGTGGGGAACCGCCTGCACCTGGCGTTCAAGCGGCAGGTGCCCACGGAGCAG
GCCCAGGCCTACGCCGAGCGCCTGGGCGTGACCTTCTTTGAGGTCAGCCCTCTGTGCAAT
TTCAACATCACAGAGTCGTTCACGGAGCTGGCCAGGATCGTGCTGCTGCGGCATGGGATG
GACCGGCTCTGGCGGCCGAGCAAGGTGCTGAGCTTGCAAGACCTCTGCTGCCGGGCGGTC
GTGTCCTGCACGCCGGTGCACCTGGTGGACAAGCTCCCGCTCCCCATTGCCTTAAGAAGC
CACCTCAAGTCCTTCTCGATGGCCAACGGCCTGAATGCCAGGATGATGCACGGCGGTTCC
TACTCCCTCACCACCAGCTCCACCCACAAAAGGAGCAGCCTCCGCAAAGTGAAGCTCGTC
CGCCCCCCCCAGAGCCCCCCCAAAAACTGCACCAGAAACAGCTGCAAAATTTCT

ORF Protein

Cloned ORF protein sequence for pFN21AE3109 Download

>KIEE3109  278 aa
MSALGSPVRAYDFLLKFLLVGDSDVGKGEILASLQDGAAESPYGHPAGIDYKTTTILLDG
RRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGIDRWIKEIDEHAPGVP
KILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITESFTELARIVLLRHGM
DRLWRPSKVLSLQDLCCRAVVSCTPVHLVDKLPLPIALRSHLKSFSMANGLNARMMHGGS
YSLTTSSTHKRSSLRKVKLVRPPQSPPKNCTRNSCKIS

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE3109 Download

>pFN21AE3109  5539 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGAGCGCCCTGGGCAGCCCGGTCCGGGCCTACGA
CTTTCTGCTCAAGTTCCTGCTGGTGGGCGACAGCGACGTGGGCAAGGGCGAGATCCTGGC
GAGCCTGCAGGATGGCGCGGCCGAGTCCCCGTACGGCCACCCGGCGGGCATCGACTACAA
GACGACCACCATCCTGCTGGACGGGCGGCGGGTGAAGCTGCAGCTCTGGGATACTTCAGG
CCAGGGAAGATTTTGTACCATATTCCGCTCCTACTCCCGGGGCGCACAGGGTGTGATCCT
GGTCTATGACATTGCGAACCGCTGGTCTTTTGACGGCATTGATCGATGGATTAAGGAGAT
CGATGAGCATGCCCCCGGAGTCCCCAAGATCCTGGTGGGGAACCGCCTGCACCTGGCGTT
CAAGCGGCAGGTGCCCACGGAGCAGGCCCAGGCCTACGCCGAGCGCCTGGGCGTGACCTT
CTTTGAGGTCAGCCCTCTGTGCAATTTCAACATCACAGAGTCGTTCACGGAGCTGGCCAG
GATCGTGCTGCTGCGGCATGGGATGGACCGGCTCTGGCGGCCGAGCAAGGTGCTGAGCTT
GCAAGACCTCTGCTGCCGGGCGGTCGTGTCCTGCACGCCGGTGCACCTGGTGGACAAGCT
CCCGCTCCCCATTGCCTTAAGAAGCCACCTCAAGTCCTTCTCGATGGCCAACGGCCTGAA
TGCCAGGATGATGCACGGCGGTTCCTACTCCCTCACCACCAGCTCCACCCACAAAAGGAG
CAGCCTCCGCAAAGTGAAGCTCGTCCGCCCCCCCCAGAGCCCCCCCAAAAACTGCACCAG
AAACAGCTGCAAAATTTCTGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGA
GTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGT
TGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCA
GACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAA
TGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAAT
AAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGG
GAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATC
CTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGT
CAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACT
TTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATG
TATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGT
ATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCT
GTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCA
CGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCC
GAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCC
CGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTG
GTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTA
TGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATC
GGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTT
GATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATG
CCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCT
TCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGC
TCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCT
CGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTAC
ACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCC
TCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAG
CTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACA
TGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTT
TCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGC
GAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCT
CTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCG
TGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCA
AGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACT
ATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTA
ACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTA
ACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCT
TCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTT
TTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGA
TCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCA
TGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGC
ACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATT
AAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTT
ATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGC
CGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCAC
TTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCG
GCGTAGAGGATCGAGATCT