FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3109, 278 aa 1>>>pF1KE3109 278 - 278 aa - 278 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.6450+/-0.000348; mu= 19.0081+/- 0.022 mean_var=76.5444+/-15.629, 0's: 0 Z-trim(116.3): 396 B-trim: 1846 in 2/50 Lambda= 0.146594 statistics sampled from 26871 (27337) to 26871 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.703), E-opt: 0.2 (0.321), width: 16 Scan time: 6.480 The best scores are: opt bits E(85289) NP_001027004 (OMIM: 300405) ras-related protein Ra ( 278) 1641 356.2 3.9e-98 NP_002861 (OMIM: 602672) ras-related protein Rab-1 ( 203) 509 116.7 3.6e-26 NP_005361 (OMIM: 165040) ras-related protein Rab-8 ( 207) 503 115.4 8.9e-26 XP_011526322 (OMIM: 165040) PREDICTED: ras-related ( 215) 503 115.4 9.1e-26 NP_057215 (OMIM: 612672) ras-related protein Rab-1 ( 200) 497 114.1 2.1e-25 NP_057614 (OMIM: 613532) ras-related protein Rab-8 ( 207) 493 113.3 3.9e-25 NP_004152 (OMIM: 179508) ras-related protein Rab-1 ( 205) 482 111.0 1.9e-24 NP_112243 (OMIM: 612565) ras-related protein Rab-1 ( 201) 471 108.6 9.5e-24 NP_006852 (OMIM: 604199) ras-related protein Rab-3 ( 201) 455 105.2 9.9e-23 NP_004654 (OMIM: 605570) ras-related protein Rab-1 ( 216) 451 104.4 1.9e-22 NP_004209 (OMIM: 604198) ras-related protein Rab-1 ( 218) 450 104.2 2.2e-22 NP_001020471 (OMIM: 616448) ras-related protein Ra ( 244) 428 99.6 5.9e-21 NP_055168 (OMIM: 605455) ras-related protein Rab-2 ( 256) 418 97.5 2.7e-20 NP_001304844 (OMIM: 612829) ras-related protein Ra ( 225) 416 97.0 3.3e-20 NP_612462 (OMIM: 612829) ras-related protein Rab-3 ( 227) 416 97.1 3.3e-20 XP_016857447 (OMIM: 179510) PREDICTED: ras-related ( 219) 415 96.8 3.7e-20 NP_002858 (OMIM: 179510) ras-related protein Rab-3 ( 219) 415 96.8 3.7e-20 NP_004274 (OMIM: 604350) ras-related protein Rab-3 ( 219) 410 95.8 7.7e-20 NP_001006639 (OMIM: 609956) ras-related protein Ra ( 223) 409 95.6 9e-20 XP_016873867 (OMIM: 612565) PREDICTED: ras-related ( 237) 402 94.1 2.6e-19 NP_002857 (OMIM: 179490) ras-related protein Rab-3 ( 220) 399 93.4 3.9e-19 XP_011526466 (OMIM: 179490) PREDICTED: ras-related ( 220) 399 93.4 3.9e-19 NP_002856 (OMIM: 179509) ras-related protein Rab-2 ( 212) 397 93.0 5.1e-19 NP_001317400 (OMIM: 609956) ras-related protein Ra ( 196) 395 92.5 6.4e-19 NP_001157461 (OMIM: 609956) ras-related protein Ra ( 228) 395 92.6 7.1e-19 NP_057238 (OMIM: 612945) ras-related protein Rab-4 ( 213) 392 91.9 1.1e-18 NP_001193765 (OMIM: 605570) ras-related protein Ra ( 155) 389 91.2 1.3e-18 NP_116235 (OMIM: 607466) ras-related protein Rab-2 ( 216) 389 91.3 1.7e-18 NP_001294982 (OMIM: 605455) ras-related protein Ra ( 190) 387 90.8 2e-18 NP_055303 (OMIM: 605693) ras-related protein Rab-3 ( 203) 387 90.9 2.1e-18 NP_001272990 (OMIM: 605693) ras-related protein Ra ( 203) 387 90.9 2.1e-18 NP_001272989 (OMIM: 605693) ras-related protein Ra ( 203) 387 90.9 2.1e-18 NP_001272988 (OMIM: 605693) ras-related protein Ra ( 203) 387 90.9 2.1e-18 NP_057406 (OMIM: 612673) ras-related protein Rab-1 ( 215) 385 90.5 3e-18 NP_783865 (OMIM: 609956) ras-related protein Rab-3 ( 216) 381 89.6 5.4e-18 NP_004569 (OMIM: 179511) ras-related protein Rab-4 ( 218) 381 89.6 5.4e-18 XP_006722363 (OMIM: 616448) PREDICTED: ras-related ( 212) 373 87.9 1.7e-17 NP_065120 (OMIM: 612942) ras-related protein Rab-2 ( 213) 371 87.5 2.3e-17 NP_057661 (OMIM: 615852) ras-related protein Rab-6 ( 208) 367 86.6 4.1e-17 NP_001161078 (OMIM: 604199) ras-related protein Ra ( 152) 365 86.1 4.4e-17 XP_011520750 (OMIM: 605455) PREDICTED: ras-related ( 231) 366 86.5 5.1e-17 NP_067075 (OMIM: 602207,614222) ras-related protei ( 206) 362 85.6 8.4e-17 NP_002860 (OMIM: 179513) ras-related protein Rab-6 ( 208) 360 85.2 1.1e-16 NP_942599 (OMIM: 179513) ras-related protein Rab-6 ( 208) 357 84.5 1.8e-16 NP_112586 (OMIM: 605950,615222) ras-related protei ( 229) 357 84.6 1.9e-16 XP_011530601 (OMIM: 605950,615222) PREDICTED: ras- ( 277) 357 84.7 2.1e-16 NP_741995 (OMIM: 300774) ras-related protein Rab-3 ( 213) 350 83.1 5e-16 XP_011519340 (OMIM: 614178) PREDICTED: EF-hand cal ( 493) 352 83.9 6.6e-16 XP_011519339 (OMIM: 614178) PREDICTED: EF-hand cal ( 493) 352 83.9 6.6e-16 NP_001138430 (OMIM: 614178) EF-hand calcium-bindin ( 731) 352 84.1 8.6e-16 >>NP_001027004 (OMIM: 300405) ras-related protein Rab-40 (278 aa) initn: 1641 init1: 1641 opt: 1641 Z-score: 1882.9 bits: 356.2 E(85289): 3.9e-98 Smith-Waterman score: 1641; 88.8% identity (95.3% similar) in 278 aa overlap (1-278:1-278) 10 20 30 40 50 60 pF1KE3 MSALGSPVRAYDFLLKFLLVGDSDVGKGEILASLQDGAAESPYGHPAGIDYKTTTILLDG ::: ::: .::::::::::::: ::::.::: :::::.:::::.: .::::::::::::: NP_001 MSAPGSPDQAYDFLLKFLLVGDRDVGKSEILESLQDGTAESPYSHLGGIDYKTTTILLDG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 RRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGIDRWIKEIDEHAPGVP .::::.::::::::::::::::::::::::::::::::::::.:.:::::.:.::::::: NP_001 QRVKLKLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIKKIEEHAPGVP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 KILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITESFTELARIVLLRHGM ::::::::::::::::: ::::::::::::::::::::::::: :::::::::::::: . NP_001 KILVGNRLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNIIESFTELARIVLLRHRL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 DRLWRPSKVLSLQDLCCRAVVSCTPVHLVDKLPLPIALRSHLKSFSMANGLNARMMHGGS . : ::::::::::::::..::::::::::::::::::::::::::::.:::::::.: : NP_001 NWLGRPSKVLSLQDLCCRTIVSCTPVHLVDKLPLPIALRSHLKSFSMAKGLNARMMRGLS 190 200 210 220 230 240 250 260 270 pF1KE3 YSLTTSSTHKRSSLRKVKLVRPPQSPPKNCTRNSCKIS :::::::::::::: :::.: ::::::::::::::::: NP_001 YSLTTSSTHKRSSLCKVKIVCPPQSPPKNCTRNSCKIS 250 260 270 >>NP_002861 (OMIM: 602672) ras-related protein Rab-13 is (203 aa) initn: 506 init1: 350 opt: 509 Z-score: 590.7 bits: 116.7 E(85289): 3.6e-26 Smith-Waterman score: 509; 44.6% identity (72.0% similar) in 175 aa overlap (9-182:3-177) 10 20 30 40 50 60 pF1KE3 MSALGSPVRAYDFLLKFLLVGDSDVGKGEILASLQDGAAESPYGHPAGIDYKTTTILLDG .::: :.:.::.::: ::: .. . . .. : :::.: :. ..: NP_002 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEG 10 20 30 40 50 70 80 90 100 110 pF1KE3 RRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGIDRWIKEIDEHAP-GV ...:::.:::.:: :: :: .: :::.:.::::::... ::..:. :.: : :.: :: NP_002 KKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGV 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE3 PKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITESFTELARIVLLRHG ..:.::. . ::.: :::. :.. :. :::.: ..:. :.:. ::: .::. : NP_002 ERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSG 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE3 MDRLWRPSKVLSLQDLCCRAVVSCTPVHLVDKLPLPIALRSHLKSFSMANGLNARMMHGG : NP_002 GRRSGNGNKPPSTDLKTCDKKNTNKCSLG 180 190 200 >>NP_005361 (OMIM: 165040) ras-related protein Rab-8A [H (207 aa) initn: 499 init1: 394 opt: 503 Z-score: 583.8 bits: 115.4 E(85289): 8.9e-26 Smith-Waterman score: 503; 45.7% identity (72.0% similar) in 175 aa overlap (9-182:3-175) 10 20 30 40 50 60 pF1KE3 MSALGSPVRAYDFLLKFLLVGDSDVGKGEILASLQDGAAESPYGHPAGIDYKTTTILLDG ..::.:.:.::.::: ::: .: ... : .: . :::.: :: ::: NP_005 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDG 10 20 30 40 50 70 80 90 100 110 pF1KE3 RRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGIDRWIKEIDEHAPG-V .:.:::.:::.:: :: :: .: :::.:..:::::.:. :::.: ::..:.::: . : NP_005 KRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADV 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE3 PKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITESFTELARIVLLRHG :...::. . :::: :... : :. :.:.: :.:. ..: ::: . . NP_005 EKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDI--KAK 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE3 MDRLWRPSKVLSLQDLCCRAVVSCTPVHLVDKLPLPIALRSHLKSFSMANGLNARMMHGG ::. NP_005 MDKKLEGNSPQGSNQGVKITPDQQKRSSFFRCVLL 180 190 200 >>XP_011526322 (OMIM: 165040) PREDICTED: ras-related pro (215 aa) initn: 499 init1: 394 opt: 503 Z-score: 583.6 bits: 115.4 E(85289): 9.1e-26 Smith-Waterman score: 503; 45.7% identity (72.0% similar) in 175 aa overlap (9-182:3-175) 10 20 30 40 50 60 pF1KE3 MSALGSPVRAYDFLLKFLLVGDSDVGKGEILASLQDGAAESPYGHPAGIDYKTTTILLDG ..::.:.:.::.::: ::: .: ... : .: . :::.: :: ::: XP_011 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDG 10 20 30 40 50 70 80 90 100 110 pF1KE3 RRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGIDRWIKEIDEHAPG-V .:.:::.:::.:: :: :: .: :::.:..:::::.:. :::.: ::..:.::: . : XP_011 KRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADV 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE3 PKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITESFTELARIVLLRHG :...::. . :::: :... : :. :.:.: :.:. ..: ::: . . XP_011 EKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDI--KAK 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE3 MDRLWRPSKVLSLQDLCCRAVVSCTPVHLVDKLPLPIALRSHLKSFSMANGLNARMMHGG ::. XP_011 MDKKLGQKDNMVCKDREPWLGEKLPRSLGQGQGWCLITAGSSS 180 190 200 210 >>NP_057215 (OMIM: 612672) ras-related protein Rab-10 [H (200 aa) initn: 482 init1: 386 opt: 497 Z-score: 577.1 bits: 114.1 E(85289): 2.1e-25 Smith-Waterman score: 497; 45.2% identity (73.8% similar) in 168 aa overlap (9-175:4-171) 10 20 30 40 50 60 pF1KE3 MSALGSPVRAYDFLLKFLLVGDSDVGKGEILASLQDGAAESPYGHPAGIDYKTTTILLDG ..::.:.:.::.::: ::: .: ..: : .. . :::.: :. :.: NP_057 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQG 10 20 30 40 50 70 80 90 100 110 pF1KE3 RRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGIDRWIKEIDEHA-PGV ...:::.:::.:: :: :: :: :::.:..:::::.: ::..:..:...::::: : NP_057 KKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDV 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE3 PKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITESFTELARIVLLRHG ..:.::. . :: :: ... :.. :. :::.: :.:: ..: ::. .: NP_057 ERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTP 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE3 MDRLWRPSKVLSLQDLCCRAVVSCTPVHLVDKLPLPIALRSHLKSFSMANGLNARMMHGG NP_057 VKEPNSENVDISSGGGVTGWKSKCC 180 190 200 >>NP_057614 (OMIM: 613532) ras-related protein Rab-8B [H (207 aa) initn: 480 init1: 386 opt: 493 Z-score: 572.3 bits: 113.3 E(85289): 3.9e-25 Smith-Waterman score: 493; 44.1% identity (72.4% similar) in 170 aa overlap (9-177:3-172) 10 20 30 40 50 60 pF1KE3 MSALGSPVRAYDFLLKFLLVGDSDVGKGEILASLQDGAAESPYGHPAGIDYKTTTILLDG ..::.:.:.::.::: ::: .: ... : .. . :::.: :: ::: NP_057 MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDG 10 20 30 40 50 70 80 90 100 110 pF1KE3 RRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGIDRWIKEIDEHAPG-V ...:::.:::.:: :: :: .: :::.:..:::::.:. :::.: ::..:.::: . : NP_057 KKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDV 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE3 PKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITESFTELARIVLLRHG ....::. . :::: :... : :. :.:.: . :. :.: ::: .. . NP_057 ERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIMTKLN 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE3 MDRLWRPSKVLSLQDLCCRAVVSCTPVHLVDKLPLPIALRSHLKSFSMANGLNARMMHGG NP_057 RKMNDSNSAGAGGPVKITENRSKKTSFFRCSLL 180 190 200 >>NP_004152 (OMIM: 179508) ras-related protein Rab-1A is (205 aa) initn: 499 init1: 370 opt: 482 Z-score: 559.8 bits: 111.0 E(85289): 1.9e-24 Smith-Waterman score: 482; 43.5% identity (69.4% similar) in 170 aa overlap (11-179:8-177) 10 20 30 40 50 60 pF1KE3 MSALGSPVRAYDFLLKFLLVGDSDVGKGEILASLQDGAAESPYGHPAGIDYKTTTILLDG ::.:.:.::.::: :::. .: . : . : :.:.: :: ::: NP_004 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDG 10 20 30 40 50 70 80 90 100 110 pF1KE3 RRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGIDRWIKEIDEHAP-GV . .:::.:::.:: :: :: :: :::.:.:.:::.... ::... .:..:::..: .: NP_004 KTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENV 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE3 PKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITESFTELARIVLLRHG :.::::. :. :. : :. .:. ::. :.:.: :. .:: .: . : : NP_004 NKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMG 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE3 MDRLWRPSKVLSLQDLCCRAVVSCTPVHLVDKLPLPIALRSHLKSFSMANGLNARMMHGG NP_004 PGATAGGAEKSNVKIQSTPVKQSGGGCC 180 190 200 >>NP_112243 (OMIM: 612565) ras-related protein Rab-1B [H (201 aa) initn: 470 init1: 362 opt: 471 Z-score: 547.3 bits: 108.6 E(85289): 9.5e-24 Smith-Waterman score: 471; 42.4% identity (69.4% similar) in 170 aa overlap (11-179:5-174) 10 20 30 40 50 60 pF1KE3 MSALGSPVRAYDFLLKFLLVGDSDVGKGEILASLQDGAAESPYGHPAGIDYKTTTILLDG ::.:.:.::.::: :::. .: . : . : :.:.: :: ::: NP_112 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDG 10 20 30 40 50 70 80 90 100 110 pF1KE3 RRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGIDRWIKEIDEHAP-GV . .:::.:::.:: :: :: :: :::.:.:.:::.... :. .. .:..:::..: .: NP_112 KTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENV 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE3 PKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITESFTELARIVLLRHG :.::::. :. :. : . :. .:. ::. :.:.: :. ..: .: . : : NP_112 NKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMG 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE3 MDRLWRPSKVLSLQDLCCRAVVSCTPVHLVDKLPLPIALRSHLKSFSMANGLNARMMHGG NP_112 PGAASGGERPNLKIDSTPVKPAGGGCC 180 190 200 >>NP_006852 (OMIM: 604199) ras-related protein Rab-35 is (201 aa) initn: 453 init1: 453 opt: 455 Z-score: 529.1 bits: 105.2 E(85289): 9.9e-23 Smith-Waterman score: 455; 40.0% identity (69.4% similar) in 180 aa overlap (9-188:3-181) 10 20 30 40 50 60 pF1KE3 MSALGSPVRAYDFLLKFLLVGDSDVGKGEILASLQDGAAESPYGHPAGIDYKTTTILLDG : :: :.:.:..::: :::. .: . :.. . : :.:.: :. ..: NP_006 MARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEING 10 20 30 40 50 70 80 90 100 110 120 pF1KE3 RRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGIDRWIKEIDEHAPGVP ..::::.:::.:: :: :: .: ::..:::.:::... :: .. ::..::... : NP_006 EKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVC 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE3 KILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITESFTELARIVLLRHGM .:::::. .. : ::.: .: ..:. .::.: : :. : :. ....:: : NP_006 RILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVL-RAKK 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE3 DRLWRPSKVLSLQDLCCRAVVSCTPVHLVDKLPLPIALRSHLKSFSMANGLNARMMHGGS : : . .. NP_006 DNLAKQQQQQQNDVVKLTKNSKRKKRCC 180 190 200 >>NP_004654 (OMIM: 605570) ras-related protein Rab-11A i (216 aa) initn: 439 init1: 317 opt: 451 Z-score: 524.1 bits: 104.4 E(85289): 1.9e-22 Smith-Waterman score: 451; 38.6% identity (69.6% similar) in 184 aa overlap (4-182:1-184) 10 20 30 40 50 60 pF1KE3 MSALGSPVRAYDFLLKFLLVGDSDVGKGEILASLQDGAAESPYGHPAGIDYKTTTILLDG .:. ::.:.: .:.::: :::...:. . . . :... : .: .:: NP_004 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG 10 20 30 40 50 70 80 90 100 110 pF1KE3 RRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGIDRWIKEIDEHAPG-V . .: :.:::.:: :. .: .: ::: :..::::::.. ......::.::. .:: . . NP_004 KTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNI 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE3 PKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITESF----TELARIVL .::::. : : :::..:.:.::. :..:.:.: : . :. .: ::. ::: NP_004 VIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVS 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE3 LRHGMDRLWRPSKVLSLQDLCCRAVVSCTPVHLVDKLPLPIALRSHLKSFSMANGLNARM .. :: NP_004 QKQMSDRRENDMSPSNNVVPIHVPPTTENKPKVQCCQNI 180 190 200 210 278 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 13:44:47 2016 done: Sun Nov 6 13:44:48 2016 Total Scan time: 6.480 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]