TBC1D10A ORF clone pFN21AE1951

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE1951

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Clone info.

Species

human

Clone Name

pFN21AE1951 Sequence (with vector) Restriction Map

Product ID

FHC10827

ORF Sequence

DNA sequence (1524 bp)
Protein sequence (508 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB590468]

Gene

KIEE1951

Symbol

TBC1D10A

Alias : EPI64, TBC1D10, dJ130H16.1, dJ130H16.2

Description

TBC1 domain family, member 10A, transcript variant 2

Original Clone ID

cs02851

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1524 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 508 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS13874.1 1.6e-126 100.0 TBC1D10A CCDS56227.1 1.3e-125 98.6 TBC1D10A CCDS10676.2 3.6e-68 59.0 TBC1D10B CCDS8162.1 6.5e-47 46.6 TBC1D10C CCDS1314.1 6.6e-15 29.8 RABGAP1L The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR000195 115 312 PF00566 Rab-GAP/TBC domain HMMSmart IPR000195 108 322 SM00164 Rab-GAP/TBC domain ProfileScan IPR000195 111 299 PS50086 Rab-GAP/TBC domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_114143 508 610020 100.0 100.0 NP_001191169 515 610020 98.6 100.0 NP_056342 808 613620 59.0 98.2 NP_940919 446 610831 46.6 84.6 XP_006718601 446 610831 46.6 84.6 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE1951 Download

>KIEE1951  1524 bp
ATGGCGAAGAGCAACGGAGAGAATGGGCCGCGCGCGCCCGCGGCCGGGGAAAGCCTGTCG
GGAACCCGGGAGAGCCTGGCCCAGGGCCCCGACGCCGCAACCACCGACGAACTCAGCTCT
CTCGGGTCTGACTCGGAGGCCAACGGCTTCGCCGAGCGCCGCATCGACAAGTTCGGCTTC
ATCGTGGGCTCGCAGGGCGCCGAGGGCGCGCTGGAGGAAGTACCCCTGGAGGTGCTGAGG
CAGAGGGAGTCCAAGTGGCTGGACATGCTCAACAACTGGGACAAATGGATGGCCAAGAAG
CACAAAAAGATTCGTCTGCGGTGCCAAAAGGGCATCCCGCCTTCTCTGCGGGGCCGTGCT
TGGCAGTACCTGTCAGGAGGCAAGGTGAAGTTACAGCAGAACCCTGGAAAGTTTGACGAG
CTGGACATGTCCCCTGGGGACCCCAAGTGGCTGGACGTGATTGAGCGTGACCTGCACCGG
CAGTTCCCATTCCATGAGATGTTTGTGTCCCGGGGGGGCCACGGCCAGCAGGACCTATTC
CGTGTGCTGAAGGCCTACACGCTGTACCGGCCCGAGGAGGGCTACTGCCAGGCCCAGGCG
CCCATTGCCGCTGTCTTGCTCATGCATATGCCTGCTGAGCAAGCCTTCTGGTGCCTGGTA
CAGATCTGTGAGAAGTACCTGCCCGGCTACTACAGCGAGAAACTGGAGGCGATCCAGCTG
GACGGGGAGATCCTTTTCTCGCTGTTGCAGAAGGTGTCGCCGGTGGCCCACAAGCACCTC
AGCCGTCAGAAGATCGACCCGCTCCTCTATATGACAGAATGGTTCATGTGCGCCTTCTCC
CGAACCTTGCCCTGGAGCTCTGTGCTGCGTGTCTGGGACATGTTCTTCTGTGAAGGGGTC
AAGATCATCTTCCGGGTGGGGCTGGTGCTGCTGAAGCACGCGCTGGGCTCCCCTGAGAAG
GTCAAAGCCTGCCAGGGCCAGTACGAGACCATCGAGCGACTGCGGAGCCTCAGCCCCAAG
ATCATGCAGGAGGCCTTTCTGGTCCAGGAGGTGGTGGAGTTGCCCGTGACAGAGCGCCAG
ATTGAGCGCGAACACCTCATTCAGCTGCGGCGCTGGCAGGAGACCCGGGGTGAGCTGCAG
TGCCGCTCCCCGCCCAGGCTGCATGGTGCCAAGGCTATCTTGGATGCAGAACCTGGTCCC
CGGCCTGCCCTACAACCTTCACCATCCATCCGCCTGCCCCTAGATGCCCCCCTCCCTGGC
TCCAAAGCCAAGCCCAAGCCACCCAAGCAGGCCCAGAAGGAGCAGCGGAAACAGATGAAG
GGGAGAGGGCAGCTGGAGAAGCCCCCAGCCCCAAATCAAGCCATGGTGGTGGCCGCTGCA
GGAGATGCATGTCCCCCACAGCATGTGCCCCCGAAGGACTCAGCCCCCAAGGACTCAGCC
CCTCAGGATTTGGCTCCCCAGGTCTCAGCCCACCACCGCTCCCAGGAGAGCTTGACGTCC
CAAGAGAGTGAGGACACCTACTTG

ORF Protein

Cloned ORF protein sequence for pFN21AE1951 Download

>KIEE1951  508 aa
MAKSNGENGPRAPAAGESLSGTRESLAQGPDAATTDELSSLGSDSEANGFAERRIDKFGF
IVGSQGAEGALEEVPLEVLRQRESKWLDMLNNWDKWMAKKHKKIRLRCQKGIPPSLRGRA
WQYLSGGKVKLQQNPGKFDELDMSPGDPKWLDVIERDLHRQFPFHEMFVSRGGHGQQDLF
RVLKAYTLYRPEEGYCQAQAPIAAVLLMHMPAEQAFWCLVQICEKYLPGYYSEKLEAIQL
DGEILFSLLQKVSPVAHKHLSRQKIDPLLYMTEWFMCAFSRTLPWSSVLRVWDMFFCEGV
KIIFRVGLVLLKHALGSPEKVKACQGQYETIERLRSLSPKIMQEAFLVQEVVELPVTERQ
IEREHLIQLRRWQETRGELQCRSPPRLHGAKAILDAEPGPRPALQPSPSIRLPLDAPLPG
SKAKPKPPKQAQKEQRKQMKGRGQLEKPPAPNQAMVVAAAGDACPPQHVPPKDSAPKDSA
PQDLAPQVSAHHRSQESLTSQESEDTYL

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE1951 Download

>pFN21AE1951  6229 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCGAAGAGCAACGGAGAGAATGGGCCGCGCGC
GCCCGCGGCCGGGGAAAGCCTGTCGGGAACCCGGGAGAGCCTGGCCCAGGGCCCCGACGC
CGCAACCACCGACGAACTCAGCTCTCTCGGGTCTGACTCGGAGGCCAACGGCTTCGCCGA
GCGCCGCATCGACAAGTTCGGCTTCATCGTGGGCTCGCAGGGCGCCGAGGGCGCGCTGGA
GGAAGTACCCCTGGAGGTGCTGAGGCAGAGGGAGTCCAAGTGGCTGGACATGCTCAACAA
CTGGGACAAATGGATGGCCAAGAAGCACAAAAAGATTCGTCTGCGGTGCCAAAAGGGCAT
CCCGCCTTCTCTGCGGGGCCGTGCTTGGCAGTACCTGTCAGGAGGCAAGGTGAAGTTACA
GCAGAACCCTGGAAAGTTTGACGAGCTGGACATGTCCCCTGGGGACCCCAAGTGGCTGGA
CGTGATTGAGCGTGACCTGCACCGGCAGTTCCCATTCCATGAGATGTTTGTGTCCCGGGG
GGGCCACGGCCAGCAGGACCTATTCCGTGTGCTGAAGGCCTACACGCTGTACCGGCCCGA
GGAGGGCTACTGCCAGGCCCAGGCGCCCATTGCCGCTGTCTTGCTCATGCATATGCCTGC
TGAGCAAGCCTTCTGGTGCCTGGTACAGATCTGTGAGAAGTACCTGCCCGGCTACTACAG
CGAGAAACTGGAGGCGATCCAGCTGGACGGGGAGATCCTTTTCTCGCTGTTGCAGAAGGT
GTCGCCGGTGGCCCACAAGCACCTCAGCCGTCAGAAGATCGACCCGCTCCTCTATATGAC
AGAATGGTTCATGTGCGCCTTCTCCCGAACCTTGCCCTGGAGCTCTGTGCTGCGTGTCTG
GGACATGTTCTTCTGTGAAGGGGTCAAGATCATCTTCCGGGTGGGGCTGGTGCTGCTGAA
GCACGCGCTGGGCTCCCCTGAGAAGGTCAAAGCCTGCCAGGGCCAGTACGAGACCATCGA
GCGACTGCGGAGCCTCAGCCCCAAGATCATGCAGGAGGCCTTTCTGGTCCAGGAGGTGGT
GGAGTTGCCCGTGACAGAGCGCCAGATTGAGCGCGAACACCTCATTCAGCTGCGGCGCTG
GCAGGAGACCCGGGGTGAGCTGCAGTGCCGCTCCCCGCCCAGGCTGCATGGTGCCAAGGC
TATCTTGGATGCAGAACCTGGTCCCCGGCCTGCCCTACAACCTTCACCATCCATCCGCCT
GCCCCTAGATGCCCCCCTCCCTGGCTCCAAAGCCAAGCCCAAGCCACCCAAGCAGGCCCA
GAAGGAGCAGCGGAAACAGATGAAGGGGAGAGGGCAGCTGGAGAAGCCCCCAGCCCCAAA
TCAAGCCATGGTGGTGGCCGCTGCAGGAGATGCATGTCCCCCACAGCATGTGCCCCCGAA
GGACTCAGCCCCCAAGGACTCAGCCCCTCAGGATTTGGCTCCCCAGGTCTCAGCCCACCA
CCGCTCCCAGGAGAGCTTGACGTCCCAAGAGAGTGAGGACACCTACTTGGTTTAAACGAA
TTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGG
CTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAG
CATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGA
CAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATT
GCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCAT
TTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTAC
AAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAG
ATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTAC
GTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATT
TGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAA
ATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTT
ATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAA
GTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAAC
AGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTC
AAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGT
CGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCAT
CTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAAC
ACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTG
CACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCC
ATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAA
CTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAG
GCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCT
GATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGAT
GGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAA
CGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATG
ACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCA
CAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGA
ACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATC
ACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGG
CGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGAT
ACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGT
ATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTC
AGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACG
ACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCG
GTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTG
GTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCG
GCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCA
GAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGA
ACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGA
TCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGA
AACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTG
GTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGT
GGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTG
CGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATA
AACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT