TRIM62 ORF clone pFN21AE1294

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE1294

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Clone info.

Species

human

Clone Name

pFN21AE1294 Sequence (with vector) Restriction Map

Product ID

FHC20199

ORF Sequence

DNA sequence (1425 bp)
Protein sequence (475 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB590599]

Gene

KIEE1294

Symbol

TRIM62

Alias : DEAR1

Description

tripartite motif containing 62

Original Clone ID

ak00092

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1425 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 475 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS376.1 6.8e-115 100.0 TRIM62 CCDS81297.1 3.1e-79 97.4 TRIM62 CCDS34378.1 4.8e-27 33.5 TRIM39 CCDS32220.1 5e-26 32.2 TRIM69 CCDS34654.1 6.1e-24 29.9 TRIM50 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR003879 293 310 PR01407 Butyrophylin-like IPR003879 333 357 PR01407 Butyrophylin-like IPR003879 363 376 PR01407 Butyrophylin-like IPR003879 407 431 PR01407 Butyrophylin-like HMMPfam IPR018957 11 53 PF00097 Zinc finger IPR000315 90 126 PF00643 Zinc finger IPR003877 348 457 PF00622 SPla/RYanodine receptor SPRY HMMSmart IPR001841 11 53 SM00184 Zinc finger IPR006574 294 347 SM00589 SPRY-associated IPR018355 348 466 SM00449 SPla/RYanodine receptor subgroup ProfileScan IPR001841 11 54 PS50089 Zinc finger IPR000315 88 128 PS50119 Zinc finger IPR001870 277 475 PS50188 B302/SPRY domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_060677 475 616755 100.0 100.0 XP_016857118 555 616755 100.0 99.2 NP_742013 488 605700 33.5 98.3 NP_892030 500 616017 32.2 97.5 XP_011514091 486 612548 30.0 97.7 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE1294 Download

>KIEE1294  1425 bp
ATGGCGTGCAGCCTCAAGGACGAGCTGCTGTGCTCCATCTGCCTGAGCATCTACCAGGAC
CCGGTGAGCCTGGGCTGCGAGCATTACTTCTGCCGCCGCTGCATCACGGAGCACTGGGTG
CGGCAGGAGGCGCAGGGCGCCCGCGACTGCCCCGAGTGCCGGCGCACGTTCGCCGAGCCC
GCGCTGGCGCCCAGCCTCAAGCTGGCCAACATCGTGGAGCGCTACAGCTCCTTCCCGCTG
GACGCCATCCTCAACGCGCGCCGCGCCGCGCGACCCTGCCAGGCGCACGACAAGGTCAAG
CTCTTCTGCCTCACGGACCGCGCGCTTCTCTGCTTCTTCTGCGACGAGCCTGCACTGCAC
GAGCAGCATCAGGTCACCGGCATCGACGACGCCTTCGACGAGCTGCAGAGGGAGCTGAAG
GACCAACTTCAGGCCCTTCAAGACAGCGAGCGGGAACACACCGAAGCGCTGCAGCTGCTC
AAGCGACAACTGGCGGAGACCAAGTCTTCCACCAAGAGCCTGCGGACCACTATCGGCGAG
GCCTTCGAGCGGCTGCACCGGCTGCTGCGTGAACGCCAGAAGGCCATGCTAGAGGAGCTG
GAGGCGGACACGGCCCGCACGCTGACCGACATCGAGCAGAAAGTCCAGCGCTACAGCCAG
CAGCTGCGCAAGGTCCAGGAGGGAGCCCAGATCCTGCAGGAGCGGCTGGCTGAAACCGAC
CGGCACACCTTCCTGGCTGGGGTGGCCTCACTGTCCGAGCGGCTCAAGGGAAAAATCCAT
GAGACCAACCTCACATATGAAGACTTCCCGACCTCCAAGTACACAGGCCCCCTGCAGTAC
ACCATCTGGAAGTCCCTGTTCCAGGACATCCACCCAGTGCCAGCCGCCCTAACCCTGGAC
CCGGGCACAGCCCACCAGCGCCTGATCCTGTCGGACGACTGCACCATTGTGGCTTACGGC
AACTTGCACCCACAGCCACTGCAGGACTCGCCAAAGCGCTTCGATGTGGAGGTGTCGGTG
CTGGGTTCTGAAGCCTTCAGTAGTGGCGTCCACTACTGGGAGGTGGTGGTGGCGGAGAAG
ACCCAGTGGGTGATCGGGCTGGCACACGAAGCCGCAAGCCGCAAGGGCAGCATCCAGATC
CAGCCCAGCCGCGGCTTCTACTGCATCGTGATGCACGATGGCAACCAGTACAGCGCCTGC
ACGGAGCCCTGGACGCGGCTTAACGTCCGGGACAAGCTTGACAAGGTGGGTGTCTTCCTG
GACTATGACCAAGGCTTGCTCATCTTCTACAATGCTGATGACATGTCCTGGCTCTACACC
TTCCGCGAGAAGTTCCCTGGCAAGCTCTGCTCTTACTTCAGCCCTGGCCAGAGCCACGCC
AATGGCAAGAACGTTCAGCCGCTGCGGATCAACACCGTCCGCATC

ORF Protein

Cloned ORF protein sequence for pFN21AE1294 Download

>KIEE1294  475 aa
MACSLKDELLCSICLSIYQDPVSLGCEHYFCRRCITEHWVRQEAQGARDCPECRRTFAEP
ALAPSLKLANIVERYSSFPLDAILNARRAARPCQAHDKVKLFCLTDRALLCFFCDEPALH
EQHQVTGIDDAFDELQRELKDQLQALQDSEREHTEALQLLKRQLAETKSSTKSLRTTIGE
AFERLHRLLRERQKAMLEELEADTARTLTDIEQKVQRYSQQLRKVQEGAQILQERLAETD
RHTFLAGVASLSERLKGKIHETNLTYEDFPTSKYTGPLQYTIWKSLFQDIHPVPAALTLD
PGTAHQRLILSDDCTIVAYGNLHPQPLQDSPKRFDVEVSVLGSEAFSSGVHYWEVVVAEK
TQWVIGLAHEAASRKGSIQIQPSRGFYCIVMHDGNQYSACTEPWTRLNVRDKLDKVGVFL
DYDQGLLIFYNADDMSWLYTFREKFPGKLCSYFSPGQSHANGKNVQPLRINTVRI

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE1294 Download

>pFN21AE1294  6130 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCGTGCAGCCTCAAGGACGAGCTGCTGTGCTC
CATCTGCCTGAGCATCTACCAGGACCCGGTGAGCCTGGGCTGCGAGCATTACTTCTGCCG
CCGCTGCATCACGGAGCACTGGGTGCGGCAGGAGGCGCAGGGCGCCCGCGACTGCCCCGA
GTGCCGGCGCACGTTCGCCGAGCCCGCGCTGGCGCCCAGCCTCAAGCTGGCCAACATCGT
GGAGCGCTACAGCTCCTTCCCGCTGGACGCCATCCTCAACGCGCGCCGCGCCGCGCGACC
CTGCCAGGCGCACGACAAGGTCAAGCTCTTCTGCCTCACGGACCGCGCGCTTCTCTGCTT
CTTCTGCGACGAGCCTGCACTGCACGAGCAGCATCAGGTCACCGGCATCGACGACGCCTT
CGACGAGCTGCAGAGGGAGCTGAAGGACCAACTTCAGGCCCTTCAAGACAGCGAGCGGGA
ACACACCGAAGCGCTGCAGCTGCTCAAGCGACAACTGGCGGAGACCAAGTCTTCCACCAA
GAGCCTGCGGACCACTATCGGCGAGGCCTTCGAGCGGCTGCACCGGCTGCTGCGTGAACG
CCAGAAGGCCATGCTAGAGGAGCTGGAGGCGGACACGGCCCGCACGCTGACCGACATCGA
GCAGAAAGTCCAGCGCTACAGCCAGCAGCTGCGCAAGGTCCAGGAGGGAGCCCAGATCCT
GCAGGAGCGGCTGGCTGAAACCGACCGGCACACCTTCCTGGCTGGGGTGGCCTCACTGTC
CGAGCGGCTCAAGGGAAAAATCCATGAGACCAACCTCACATATGAAGACTTCCCGACCTC
CAAGTACACAGGCCCCCTGCAGTACACCATCTGGAAGTCCCTGTTCCAGGACATCCACCC
AGTGCCAGCCGCCCTAACCCTGGACCCGGGCACAGCCCACCAGCGCCTGATCCTGTCGGA
CGACTGCACCATTGTGGCTTACGGCAACTTGCACCCACAGCCACTGCAGGACTCGCCAAA
GCGCTTCGATGTGGAGGTGTCGGTGCTGGGTTCTGAAGCCTTCAGTAGTGGCGTCCACTA
CTGGGAGGTGGTGGTGGCGGAGAAGACCCAGTGGGTGATCGGGCTGGCACACGAAGCCGC
AAGCCGCAAGGGCAGCATCCAGATCCAGCCCAGCCGCGGCTTCTACTGCATCGTGATGCA
CGATGGCAACCAGTACAGCGCCTGCACGGAGCCCTGGACGCGGCTTAACGTCCGGGACAA
GCTTGACAAGGTGGGTGTCTTCCTGGACTATGACCAAGGCTTGCTCATCTTCTACAATGC
TGATGACATGTCCTGGCTCTACACCTTCCGCGAGAAGTTCCCTGGCAAGCTCTGCTCTTA
CTTCAGCCCTGGCCAGAGCCACGCCAATGGCAAGAACGTTCAGCCGCTGCGGATCAACAC
CGTCCGCATCGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTG
CAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTG
CCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATA
AGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATT
TGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTT
AACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTT
TTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCG
CTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGT
TTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGA
AATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTC
ATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATT
CAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCT
CACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGT
TACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGT
TTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGAC
GCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTAC
TCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCT
GCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCG
AAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGG
GAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCA
ATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAA
CAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTT
CCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATC
ATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGG
AGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATT
AAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAA
AGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAA
AAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGC
TCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGA
CAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTC
CGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTT
CTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCT
GTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTG
AGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTA
GCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCT
ACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAA
GAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTT
GCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTA
CGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTAT
CAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGAT
GGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGG
TAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGC
GATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGC
GCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCT
GCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGG
ATCGAGATCT