SYNC ORF clone pFN21AE1247

KOP
KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE1247

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Clone info.

Species

human

Clone Name

pFN21AE1247 Sequence (with vector) Restriction Map

Product ID

FHC20193

ORF Sequence

DNA sequence (1446 bp)
Protein sequence (482 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB590598]

Gene

KIEE1247

Symbol

SYNC

Alias : SYNC1, SYNCOILIN

Description

syncoilin, intermediate filament protein, transcript variant 1

Original Clone ID

cs03147

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1446 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 482 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS367.2 8.2e-79 99.6 SYNC CCDS53294.1 6.2e-74 99.1 SYNC The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR016044 187 456 PF00038 Filament
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_110413 482 611750 99.8 100.0 NP_001155180 476 611750 99.3 94.6 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE1247 Download

>KIEE1247  1446 bp
ATGGCCAGCCCGGAGCCCCGGCGCGGCGGGGACGGCGCCGCCCAGGCCGCGAGGAAAACA
AGAGTAGAGGCCAATTCTCCTCTTCCAAAGAACTCTGGATCCCTAAATGAGGCAGAAGCC
TTGAACCCAGAAGTTACTCTATCTTCAGAGGGGTCCTTAAACCTCGAAGACATTCTCTAC
CTGGAGGACACAGGTGACCTTGATGAGACACTCTATGTGCAAGAGACTGAGAAGGCAGAG
GAGGCCCTGTATATTGAGGAGGCCATGCAGCCAGATGAGGCTCTGCATGTGGAGGAGCCT
GGGAATCCAGAGGAGACAGTGTGTGTGGAGGAAACCACGGAGCCAGATCGGATACAGTTT
GTGGAGGGGCCCGTGGAGCCAGGAAAGCCCACAAGCCCAGAGCACGTTGTTTATGAGGGA
GAGACAGTCACAAGGGCGGAGAAATCTAACCCTGAGGAGAGCCTCAGAGCCGAGCAGAGC
CCCAGCGTGGAGGAGAACCTGAGCATAGAGGACCTGGAATTGCTAGAGGGGCGTTTCCAG
CAGTGTGTCCAAGCTGTGGCCCAGCTGGAAGAGGAGAGGGATCAGCTCATCCATGAGCTT
GTATTGCTCCGGGAACCAGCCCTGCAGGAGGTACAGCAAGTCCATCAAGACATCCTGGCT
GCCTACAAGCTCCATGCCCAAGCAGAGCTGGAGAGAGATGGCCTAAGGGAGGAGATCCGG
CTGGTCAAGCAGAAGCTTTTCAAAGTGACAAAGGAATGTGTGGCCTACCAATACCAGCTG
GAGTGCCGCCAGCAGGACGTGGCTCAGTTTGCCGATTTCCAGGAAGTGCTGACTACAAGG
GCAACCCAGCTCTCAGAGGAACTGGCCCAGCTCCGGGATGCCTATCAGAAGCAGAAGGAG
CAGCTGCGGCAACAACTAGAAGCCCCTCCAAGCCAGAGGGATGGGCACTTTCTCCAGGAA
AGCCGGCGACTCTCTGCCCAGTTTGAAAATCTCATGGCAGAGAGCCGCCAGGACCTGGAG
GAGGAGTATGAGCCTCAGTTCCTGCGGCTCCTAGAGAGGAAAGAAGCTGGGACCAAAGCT
CTGCAGAGAACCCAGGCTGAGATCCAGGAAATGAAGGAGGCTCTGAGACCCCTGCAAGCA
GAGGCCCGGCAGCTCCGCCTGCAAAACAGGAACCTGGAGGACCAGATCGCACTTGTGAGG
CAAAAACGAGATGAAGAGGTGCAGCAGTACAGGGAACAGCTGGAGGAAATGGAAGAACGC
CAGAGGCAGTTAAGAAATGGGGTGCAACTCCAGCAACAGAAGAACAAAGAGATGGAACAG
CTAAGGCTCAGTCTTGCTGAAGAGCTCTCTACTTATAAGGCTATGCTACTACCCAAGAGC
CTGGAACAGGCTGATGCTCCCACTTCTCAGGCAGGTGGAATGGAGACACAGTCTCAAGGG
GCTGTT

ORF Protein

Cloned ORF protein sequence for pFN21AE1247 Download

>KIEE1247  482 aa
MASPEPRRGGDGAAQAARKTRVEANSPLPKNSGSLNEAEALNPEVTLSSEGSLNLEDILY
LEDTGDLDETLYVQETEKAEEALYIEEAMQPDEALHVEEPGNPEETVCVEETTEPDRIQF
VEGPVEPGKPTSPEHVVYEGETVTRAEKSNPEESLRAEQSPSVEENLSIEDLELLEGRFQ
QCVQAVAQLEEERDQLIHELVLLREPALQEVQQVHQDILAAYKLHAQAELERDGLREEIR
LVKQKLFKVTKECVAYQYQLECRQQDVAQFADFQEVLTTRATQLSEELAQLRDAYQKQKE
QLRQQLEAPPSQRDGHFLQESRRLSAQFENLMAESRQDLEEEYEPQFLRLLERKEAGTKA
LQRTQAEIQEMKEALRPLQAEARQLRLQNRNLEDQIALVRQKRDEEVQQYREQLEEMEER
QRQLRNGVQLQQQKNKEMEQLRLSLAEELSTYKAMLLPKSLEQADAPTSQAGGMETQSQG
AV

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE1247 Download

>pFN21AE1247  6151 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCCAGCCCGGAGCCCCGGCGCGGCGGGGACGG
CGCCGCCCAGGCCGCGAGGAAAACAAGAGTAGAGGCCAATTCTCCTCTTCCAAAGAACTC
TGGATCCCTAAATGAGGCAGAAGCCTTGAACCCAGAAGTTACTCTATCTTCAGAGGGGTC
CTTAAACCTCGAAGACATTCTCTACCTGGAGGACACAGGTGACCTTGATGAGACACTCTA
TGTGCAAGAGACTGAGAAGGCAGAGGAGGCCCTGTATATTGAGGAGGCCATGCAGCCAGA
TGAGGCTCTGCATGTGGAGGAGCCTGGGAATCCAGAGGAGACAGTGTGTGTGGAGGAAAC
CACGGAGCCAGATCGGATACAGTTTGTGGAGGGGCCCGTGGAGCCAGGAAAGCCCACAAG
CCCAGAGCACGTTGTTTATGAGGGAGAGACAGTCACAAGGGCGGAGAAATCTAACCCTGA
GGAGAGCCTCAGAGCCGAGCAGAGCCCCAGCGTGGAGGAGAACCTGAGCATAGAGGACCT
GGAATTGCTAGAGGGGCGTTTCCAGCAGTGTGTCCAAGCTGTGGCCCAGCTGGAAGAGGA
GAGGGATCAGCTCATCCATGAGCTTGTATTGCTCCGGGAACCAGCCCTGCAGGAGGTACA
GCAAGTCCATCAAGACATCCTGGCTGCCTACAAGCTCCATGCCCAAGCAGAGCTGGAGAG
AGATGGCCTAAGGGAGGAGATCCGGCTGGTCAAGCAGAAGCTTTTCAAAGTGACAAAGGA
ATGTGTGGCCTACCAATACCAGCTGGAGTGCCGCCAGCAGGACGTGGCTCAGTTTGCCGA
TTTCCAGGAAGTGCTGACTACAAGGGCAACCCAGCTCTCAGAGGAACTGGCCCAGCTCCG
GGATGCCTATCAGAAGCAGAAGGAGCAGCTGCGGCAACAACTAGAAGCCCCTCCAAGCCA
GAGGGATGGGCACTTTCTCCAGGAAAGCCGGCGACTCTCTGCCCAGTTTGAAAATCTCAT
GGCAGAGAGCCGCCAGGACCTGGAGGAGGAGTATGAGCCTCAGTTCCTGCGGCTCCTAGA
GAGGAAAGAAGCTGGGACCAAAGCTCTGCAGAGAACCCAGGCTGAGATCCAGGAAATGAA
GGAGGCTCTGAGACCCCTGCAAGCAGAGGCCCGGCAGCTCCGCCTGCAAAACAGGAACCT
GGAGGACCAGATCGCACTTGTGAGGCAAAAACGAGATGAAGAGGTGCAGCAGTACAGGGA
ACAGCTGGAGGAAATGGAAGAACGCCAGAGGCAGTTAAGAAATGGGGTGCAACTCCAGCA
ACAGAAGAACAAAGAGATGGAACAGCTAAGGCTCAGTCTTGCTGAAGAGCTCTCTACTTA
TAAGGCTATGCTACTACCCAAGAGCCTGGAACAGGCTGATGCTCCCACTTCTCAGGCAGG
TGGAATGGAGACACAGTCTCAAGGGGCTGTTGTTTAAACGAATTCGGGCTCGGTACCCGG
GGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAA
AGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGG
CCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATG
CAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATT
ATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAG
GGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAA
TTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACA
TTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACG
TCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATA
CATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGA
AAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCA
TTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGAT
CAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAG
AGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGC
GCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCT
CAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACA
GTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTT
CTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCAT
GTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGT
GACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTA
CTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGA
CCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGT
GAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATC
GTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCT
GAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCC
AACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACG
CAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGT
TGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAA
GTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCT
CCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCC
CTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGG
TCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCT
TATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAG
CAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGA
AGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGA
AGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTG
GTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAG
AAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAG
GGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAA
ATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAG
CTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATA
CGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTA
CCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTA
TGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCC
ACGATGCGTCCGGCGTAGAGGATCGAGATCT