NKX2-4 ORF clone pFN21AE0789

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE0789

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Clone info.

Species

human

Clone Name

pFN21AE0789 Sequence (with vector) Restriction Map

Product ID

FHC30010

ORF Sequence

DNA sequence (1062 bp)
Protein sequence (354 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE0789

Symbol

NKX2-4

Alias : NKX2.4, NKX2D

Description

NK2 homeobox 4

Original Clone ID

cs02289

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1062 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 354 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS42855.1 1.9e-62 100.0 4 CCDS9659.1 1.4e-19 58.8 1 CCDS41945.1 1.5e-19 58.8 1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR020479 211 222 PR00024 Homeobox IPR020479 226 236 PR00024 Homeobox IPR020479 236 245 PR00024 Homeobox HMMPfam IPR001356 190 246 PF00046 Homeobox HMMSmart IPR001356 189 251 SM00389 Homeobox ProfileScan IPR001356 187 247 PS50071 Homeobox
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_149416 354 607808 100.0 100.0 NP_003308 371 118700,188550,600635,610978 58.8 96.3 NP_001073136 401 118700,188550,600635,610978 58.8 96.3 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE0789 Download

>KIEE0789  1062 bp
ATGTCGTTGAGCCCAAAGCACACGACGCCCTTCTCCGTGTCCGACATCCTGAGCCCCATC
GAGGAGACCTACAAGAAGTTCAGCGGCGCCATGGACGGCGCGCCACCCGGCCTGGGGGCG
CCCCTGGGGGCCGCGGCCGCCTACCGCGCGCCGCCACCTGGGCCCTCCTCGCAGGCGGCG
ACCGTGGCGGGCATGCAGCCTTCTCACGCCATGGCGGGTCACAACGCGGCGGCCGCGGCG
GCGGCGGCAGCAGCTGCGGCGGCGGCGGCCGCCACCTACCACATGCCGCCCGGCGTCTCG
CAGTTCCCGCACGGCGCCATGGGCAGCTACTGCAACGGCGGCCTGGGCAACATGGGCGAG
CTGCCCGCCTACACGGACGGCATGCGGGGCGGCGCGGCCACCGGCTGGTACGGCGCCAAC
CCGGACCCACGCTACTCGTCAATCTCCAGGTTCATGGGGCCGTCGGCGGGCGTGAATGTG
GCCGGCATGGGGTCGCTGACCGGCATCGCGGACGCCGCCAAGTCGCTGGGCCCGCTGCAC
GCGGCGGCGGCGGCAGCCGCTCCGCGAAGGAAGCGCCGCGTGCTCTTCTCGCAGGCGCAG
GTCTACGAGCTGGAGCGGCGCTTCAAGCAGCAGAAGTACCTGTCGGCGCCCGAGCGCGAG
CACCTGGCCAGCATGATCCACCTGACGCCCACGCAGGTCAAGATCTGGTTCCAGAACCAC
CGGTACAAGATGAAACGGCAGGCCAAGGACAAGGCGGCGCAGCAGCTGCAGCAGGAGGGC
GGCCTGGGCCCGCCGCCGCCTCCGCCGCCGTCCCCGCGCCGCGTGGCGGTGCCTGTGCTG
GTCAAGGACGGCAAGCCGTGCCAGAACGGCGCCAGCACGCCCACCCCCGGCCAGGCCGGT
CCGCAGCCGCCGGCCCCGACGCCAGCACCTGAGCTGGAGGAGCTGTCGCCCAGCCCACCC
GCGCTGCACGGCCCGGGGGGCGGCCTGGCGGCCCTGGACGCGGCCGCCGGGGAGTACAGC
GGCGGCGTCCTGGGCGCCAACCTGCTCTATGGCAGGACGTGG

ORF Protein

Cloned ORF protein sequence for pFN21AE0789 Download

>KIEE0789  354 aa
MSLSPKHTTPFSVSDILSPIEETYKKFSGAMDGAPPGLGAPLGAAAAYRAPPPGPSSQAA
TVAGMQPSHAMAGHNAAAAAAAAAAAAAAAATYHMPPGVSQFPHGAMGSYCNGGLGNMGE
LPAYTDGMRGGAATGWYGANPDPRYSSISRFMGPSAGVNVAGMGSLTGIADAAKSLGPLH
AAAAAAAPRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNH
RYKMKRQAKDKAAQQLQQEGGLGPPPPPPPSPRRVAVPVLVKDGKPCQNGASTPTPGQAG
PQPPAPTPAPELEELSPSPPALHGPGGGLAALDAAAGEYSGGVLGANLLYGRTW

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE0789 Download

>pFN21AE0789  5767 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGTCGTTGAGCCCAAAGCACACGACGCCCTTCTC
CGTGTCCGACATCCTGAGCCCCATCGAGGAGACCTACAAGAAGTTCAGCGGCGCCATGGA
CGGCGCGCCACCCGGCCTGGGGGCGCCCCTGGGGGCCGCGGCCGCCTACCGCGCGCCGCC
ACCTGGGCCCTCCTCGCAGGCGGCGACCGTGGCGGGCATGCAGCCTTCTCACGCCATGGC
GGGTCACAACGCGGCGGCCGCGGCGGCGGCGGCAGCAGCTGCGGCGGCGGCGGCCGCCAC
CTACCACATGCCGCCCGGCGTCTCGCAGTTCCCGCACGGCGCCATGGGCAGCTACTGCAA
CGGCGGCCTGGGCAACATGGGCGAGCTGCCCGCCTACACGGACGGCATGCGGGGCGGCGC
GGCCACCGGCTGGTACGGCGCCAACCCGGACCCACGCTACTCGTCAATCTCCAGGTTCAT
GGGGCCGTCGGCGGGCGTGAATGTGGCCGGCATGGGGTCGCTGACCGGCATCGCGGACGC
CGCCAAGTCGCTGGGCCCGCTGCACGCGGCGGCGGCGGCAGCCGCTCCGCGAAGGAAGCG
CCGCGTGCTCTTCTCGCAGGCGCAGGTCTACGAGCTGGAGCGGCGCTTCAAGCAGCAGAA
GTACCTGTCGGCGCCCGAGCGCGAGCACCTGGCCAGCATGATCCACCTGACGCCCACGCA
GGTCAAGATCTGGTTCCAGAACCACCGGTACAAGATGAAACGGCAGGCCAAGGACAAGGC
GGCGCAGCAGCTGCAGCAGGAGGGCGGCCTGGGCCCGCCGCCGCCTCCGCCGCCGTCCCC
GCGCCGCGTGGCGGTGCCTGTGCTGGTCAAGGACGGCAAGCCGTGCCAGAACGGCGCCAG
CACGCCCACCCCCGGCCAGGCCGGTCCGCAGCCGCCGGCCCCGACGCCAGCACCTGAGCT
GGAGGAGCTGTCGCCCAGCCCACCCGCGCTGCACGGCCCGGGGGGCGGCCTGGCGGCCCT
GGACGCGGCCGCCGGGGAGTACAGCGGCGGCGTCCTGGGCGCCAACCTGCTCTATGGCAG
GACGTGGGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAG
GCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCA
CCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGA
TACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGT
GAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAAC
AACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTA
AGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTT
GCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTC
TGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAAT
GTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATG
AGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAA
CATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCAC
CCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTAC
ATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTT
CCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCC
GGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCA
CCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCC
ATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAG
GAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAA
CCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATG
GCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAA
TTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCG
GCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATT
GCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGT
CAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAG
CATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGG
CGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAG
GCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCC
GCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAG
GACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGA
CCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTC
ATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTG
TGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGT
CCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCA
GAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACA
CTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAG
TTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCA
AGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGG
GGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAA
AAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGC
CCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAA
TGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGAT
TGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCT
GAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCC
CTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATC
GAGATCT