FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE0789, 354 aa 1>>>pF1KE0789 354 - 354 aa - 354 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 9.8531+/-0.000385; mu= 1.1964+/- 0.024 mean_var=426.3868+/-85.650, 0's: 0 Z-trim(125.5): 112 B-trim: 0 in 0/61 Lambda= 0.062112 statistics sampled from 49150 (49298) to 49150 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.824), E-opt: 0.2 (0.578), width: 16 Scan time: 7.680 The best scores are: opt bits E(85289) NP_149416 (OMIM: 607808) homeobox protein Nkx-2.4 ( 354) 2425 230.6 4.2e-60 NP_003308 (OMIM: 118700,188550,600635,610978) home ( 371) 882 92.3 1.8e-18 NP_001073136 (OMIM: 118700,188550,600635,610978) h ( 401) 882 92.4 1.9e-18 NP_004378 (OMIM: 108900,187500,217095,225250,60058 ( 324) 480 56.2 1.2e-07 NP_660328 (OMIM: 606727) homeobox protein Nkx-2.3 ( 364) 471 55.5 2.2e-07 NP_055175 (OMIM: 603245) homeobox protein Nkx-2.8 ( 239) 450 53.4 6.2e-07 NP_001129743 (OMIM: 217095,611770) homeobox protei ( 301) 383 47.5 4.6e-05 XP_006723629 (OMIM: 604612) PREDICTED: homeobox pr ( 202) 367 45.8 9.7e-05 NP_002500 (OMIM: 604612) homeobox protein Nkx-2.2 ( 273) 365 45.8 0.00013 NP_061815 (OMIM: 142992,612109) homeobox protein H ( 348) 301 40.2 0.0081 XP_011533177 (OMIM: 600297) PREDICTED: homeobox pr ( 321) 299 40.0 0.0088 >>NP_149416 (OMIM: 607808) homeobox protein Nkx-2.4 [Hom (354 aa) initn: 2425 init1: 2425 opt: 2425 Z-score: 1200.1 bits: 230.6 E(85289): 4.2e-60 Smith-Waterman score: 2425; 100.0% identity (100.0% similar) in 354 aa overlap (1-354:1-354) 10 20 30 40 50 60 pF1KE0 MSLSPKHTTPFSVSDILSPIEETYKKFSGAMDGAPPGLGAPLGAAAAYRAPPPGPSSQAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_149 MSLSPKHTTPFSVSDILSPIEETYKKFSGAMDGAPPGLGAPLGAAAAYRAPPPGPSSQAA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 TVAGMQPSHAMAGHNAAAAAAAAAAAAAAAATYHMPPGVSQFPHGAMGSYCNGGLGNMGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_149 TVAGMQPSHAMAGHNAAAAAAAAAAAAAAAATYHMPPGVSQFPHGAMGSYCNGGLGNMGE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE0 LPAYTDGMRGGAATGWYGANPDPRYSSISRFMGPSAGVNVAGMGSLTGIADAAKSLGPLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_149 LPAYTDGMRGGAATGWYGANPDPRYSSISRFMGPSAGVNVAGMGSLTGIADAAKSLGPLH 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE0 AAAAAAAPRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_149 AAAAAAAPRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNH 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE0 RYKMKRQAKDKAAQQLQQEGGLGPPPPPPPSPRRVAVPVLVKDGKPCQNGASTPTPGQAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_149 RYKMKRQAKDKAAQQLQQEGGLGPPPPPPPSPRRVAVPVLVKDGKPCQNGASTPTPGQAG 250 260 270 280 290 300 310 320 330 340 350 pF1KE0 PQPPAPTPAPELEELSPSPPALHGPGGGLAALDAAAGEYSGGVLGANLLYGRTW :::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_149 PQPPAPTPAPELEELSPSPPALHGPGGGLAALDAAAGEYSGGVLGANLLYGRTW 310 320 330 340 350 >>NP_003308 (OMIM: 118700,188550,600635,610978) homeobox (371 aa) initn: 953 init1: 470 opt: 882 Z-score: 452.6 bits: 92.3 E(85289): 1.8e-18 Smith-Waterman score: 1199; 58.8% identity (73.7% similar) in 354 aa overlap (1-341:1-322) 10 20 30 40 50 60 pF1KE0 MSLSPKHTTPFSVSDILSPIEETYKKFSGAMDGAPPGLGAPLGAAAAYRAPPPGPSSQAA ::.::::::::::::::::.::.::: . :.:. ::::::.: .: :: NP_003 MSMSPKHTTPFSVSDILSPLEESYKKVG--MEGG--GLGAPLAAYRQGQAAPP------- 10 20 30 40 70 80 90 100 110 pF1KE0 TVAGMQPSHAMAGHNAAAAAAAAAAAAAAAATYHMPP-GVSQFPHGAMGSYCNGGLGNMG .:.:: .::. ::..:..:: ::: :: :. :.:.:.::::.::::. NP_003 -TAAMQ-QHAV-GHHGAVTAA-----------YHMTAAGVPQLSHSAVGGYCNGNLGNMS 50 60 70 80 90 120 130 140 150 160 170 pF1KE0 ELPAYTDGMRGGAA-TGWYGANPDPRYSSISRFMGPSAGVNVAGMGSLTGIADAAKSLGP ::: : : ::..:. ::::::::::. .:::::::..:.:..:::.: ...:..:...: NP_003 ELPPYQDTMRNSASGPGWYGANPDPRFPAISRFMGPASGMNMSGMGGLGSLGDVSKNMAP 100 110 120 130 140 150 180 190 200 210 220 230 pF1KE0 LHAAAAAAAPRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQ : .:::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 L-----PSAPRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQ 160 170 180 190 200 210 240 250 260 270 280 pF1KE0 NHRYKMKRQAKDKAAQQ-LQQE-------GGLGPPPPPPP---SPRRVAVPVLVKDGKPC ::::::::::::::::: :::. :: : : ::::::::::::::::: NP_003 NHRYKMKRQAKDKAAQQQLQQDSGGGGGGGGTGCPQQQQAQQQSPRRVAVPVLVKDGKPC 220 230 240 250 260 270 290 300 310 320 330 340 pF1KE0 QNGASTPTPGQAGPQPPAPTPAPELEELSPSPPALHGPGGGLAALDAAAGEYSGGVLGAN : :: :.:: :. : : : . . . . : . :.: :.: : :. : NP_003 QAGA--PAPGAASLQGHAQQQAQHQAQAAQAAAAAISVGSGGAGLGAHPGHQPGSAGQSP 280 290 300 310 320 350 pF1KE0 LLYGRTW NP_003 DLAHHAASPAALQGQVSSLSHLNSSGSDYGTMSCSTLLYGRTW 330 340 350 360 370 >>NP_001073136 (OMIM: 118700,188550,600635,610978) homeo (401 aa) initn: 953 init1: 470 opt: 882 Z-score: 452.2 bits: 92.4 E(85289): 1.9e-18 Smith-Waterman score: 1199; 58.8% identity (73.7% similar) in 354 aa overlap (1-341:31-352) 10 20 30 pF1KE0 MSLSPKHTTPFSVSDILSPIEETYKKFSGA ::.::::::::::::::::.::.::: . NP_001 MWSGGSGKARGWEAAAGGRSSPGRLSRRRIMSMSPKHTTPFSVSDILSPLEESYKKVG-- 10 20 30 40 50 40 50 60 70 80 90 pF1KE0 MDGAPPGLGAPLGAAAAYRAPPPGPSSQAATVAGMQPSHAMAGHNAAAAAAAAAAAAAAA :.:. ::::::.: .: :: .:.:: .::. ::..:..:: NP_001 MEGG--GLGAPLAAYRQGQAAPP--------TAAMQ-QHAV-GHHGAVTAA--------- 60 70 80 90 100 110 120 130 140 pF1KE0 ATYHMPP-GVSQFPHGAMGSYCNGGLGNMGELPAYTDGMRGGAA-TGWYGANPDPRYSSI ::: :: :. :.:.:.::::.::::.::: : : ::..:. ::::::::::. .: NP_001 --YHMTAAGVPQLSHSAVGGYCNGNLGNMSELPPYQDTMRNSASGPGWYGANPDPRFPAI 100 110 120 130 140 150 150 160 170 180 190 200 pF1KE0 SRFMGPSAGVNVAGMGSLTGIADAAKSLGPLHAAAAAAAPRRKRRVLFSQAQVYELERRF ::::::..:.:..:::.: ...:..:...:: .:::::::::::::::::::::: NP_001 SRFMGPASGMNMSGMGGLGSLGDVSKNMAPL-----PSAPRRKRRVLFSQAQVYELERRF 160 170 180 190 200 210 210 220 230 240 250 260 pF1KE0 KQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQAKDKAAQQ-LQQE-------G ::::::::::::::::::::::::::::::::::::::::::::::: :::. : NP_001 KQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQAKDKAAQQQLQQDSGGGGGGG 220 230 240 250 260 270 270 280 290 300 310 pF1KE0 GLGPPPPPPP---SPRRVAVPVLVKDGKPCQNGASTPTPGQAGPQPPAPTPAPELEELSP : : : :::::::::::::::::: :: :.:: :. : : : . . . NP_001 GTGCPQQQQAQQQSPRRVAVPVLVKDGKPCQAGA--PAPGAASLQGHAQQQAQHQAQAAQ 280 290 300 310 320 320 330 340 350 pF1KE0 SPPALHGPGGGLAALDAAAGEYSGGVLGANLLYGRTW . : . :.: :.: : :. : NP_001 AAAAAISVGSGGAGLGAHPGHQPGSAGQSPDLAHHAASPAALQGQVSSLSHLNSSGSDYG 330 340 350 360 370 380 >>NP_004378 (OMIM: 108900,187500,217095,225250,600584,61 (324 aa) initn: 434 init1: 335 opt: 480 Z-score: 258.6 bits: 56.2 E(85289): 1.2e-07 Smith-Waterman score: 484; 42.7% identity (62.9% similar) in 248 aa overlap (51-294:9-236) 30 40 50 60 70 80 pF1KE0 EETYKKFSGAMDGAPPGLGAPLGAAAAYRAPPPGPSSQAATVAGMQPSHAMAGHNAAAAA : : .. .. .: : : ::. .: NP_004 MFPSPALTPTPFSVKDILNLEQQQRSLAAAGELSARLE 10 20 30 90 100 110 120 130 pF1KE0 AAAAAAAAAAATYHMPPGVSQFPHGAMGSYCNGGLGNM-GELPAYTDGMRGGAATGWYGA :. : .. :... : . :..: :: .. .:: . . ..: . : NP_004 ATLAPSSCMLAAFK--PEAYAGPEAA-----APGLPELRAELGRAPSPAKCASA---FPA 40 50 60 70 80 140 150 160 170 180 190 pF1KE0 NPD--PR-YSSISRFMGPSAGVNVAGMGSLTGIADAAKSLGPLHAAAAAAAPRRKRRVLF : :: ::. . : : . . .: .. :. . .: : ::: :::: NP_004 APAFYPRAYSDPDPAKDPRA--EKKELCALQKAVELEKTEAD-NAERPRARRRRKPRVLF 90 100 110 120 130 140 200 210 220 230 240 250 pF1KE0 SQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQAKDKAAQQL :::::::::::::::.:::::::..:::...:: :::::::::.::: ::: .:.. . . NP_004 SQAQVYELERRFKQQRYLSAPERDQLASVLKLTSTQVKIWFQNRRYKCKRQRQDQTLELV 150 160 170 180 190 200 260 270 280 290 300 310 pF1KE0 QQEGGLGPPPPPPPSPRRVAVPVLVKDGKPCQNGASTPTPGQAGPQPPAPTPAPELEELS :: :::::::. ::.::::::.::::: : :.: NP_004 ----GL-PPPPPPPA-RRIAVPVLVRDGKPCL-GDSAPYAPAYGVGLNPYGYNAYPAYPG 210 220 230 240 250 320 330 340 350 pF1KE0 PSPPALHGPGGGLAALDAAAGEYSGGVLGANLLYGRTW NP_004 YGGAACSPGYSCTAAYPAGPSPAQPATAAANNNFVNFGVGDLNAVQSPGIPQSNSGVSTL 260 270 280 290 300 310 >>NP_660328 (OMIM: 606727) homeobox protein Nkx-2.3 [Hom (364 aa) initn: 469 init1: 342 opt: 471 Z-score: 253.7 bits: 55.5 E(85289): 2.2e-07 Smith-Waterman score: 486; 55.1% identity (65.9% similar) in 167 aa overlap (174-336:129-278) 150 160 170 180 190 pF1KE0 RYSSISRFMGPSAGVNVAGMGSLTGIADAAKSLGPLHAAAAAAAP----RRKRRVLFSQA .. : .:: . : ::: ::::::: NP_660 DSCSEPKEHEEEPEVVRDRSQKSCQLKKSLETAGDCKAAEESERPKPRSRRKPRVLFSQA 100 110 120 130 140 150 200 210 220 230 240 250 pF1KE0 QVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQAKDKAAQQLQQE ::.:::::::::.:::::::::::: ..:: :::::::::.::: ::: .::. . NP_660 QVFELERRFKQQRYLSAPEREHLASSLKLTSTQVKIWFQNRRYKCKRQRQDKSLE----- 160 170 180 190 200 210 260 270 280 290 300 310 pF1KE0 GGLGPPPPPPPSPRRVAVPVLVKDGKPCQNGASTPTPGQAGPQPPAPTPAPELEELSPSP :: :::: ::::::::::.::::: ::. : :: . : NP_660 --LGAHAPPPP-PRRVAVPVLVRDGKPC----VTPSAQAYG----APYSVGASAYSYNSF 220 230 240 250 260 320 330 340 350 pF1KE0 PALHGPGGGLAALDAAAGEYSGGVLGANLLYGRTW :: .: :.. :: ::: NP_660 PA-YGYGNSAAAAAAAAAAAAAAAAYSSSYGCAYPAGGGGGGGGTSAATTAMQPACSAAG 270 280 290 300 310 320 >>NP_055175 (OMIM: 603245) homeobox protein Nkx-2.8 [Hom (239 aa) initn: 449 init1: 338 opt: 450 Z-score: 245.5 bits: 53.4 E(85289): 6.2e-07 Smith-Waterman score: 450; 51.7% identity (73.2% similar) in 149 aa overlap (186-334:81-225) 160 170 180 190 200 210 pF1KE0 AGVNVAGMGSLTGIADAAKSLGPLHAAAAAAAPRRKRRVLFSQAQVYELERRFKQQKYLS : :.:::::::.::. ::::::.::.::: NP_055 YPSSDESSLETSPPDSSQRPSARPASPGSDAEKRKKRRVLFSKAQTLELERRFRQQRYLS 60 70 80 90 100 110 220 230 240 250 260 270 pF1KE0 APEREHLASMIHLTPTQVKIWFQNHRYKMKRQAKDKAAQQLQQEGGLGPPPPPPPSPRRV :::::.:::...::::::::::::::::.:: :. .: . . .. . : ::: NP_055 APEREQLASLLRLTPTQVKIWFQNHRYKLKR-ARAPGAAESPDLAASAELHAAPGLLRRV 120 130 140 150 160 280 290 300 310 320 330 pF1KE0 AVPVLVKDGKPCQNGASTPTPGQAGPQPPAPTPAPELEELSPSPPALHGPGGGLAALDAA .:::::.::.:: .:.. . : :. : .: : :. ::. :::..:. . : NP_055 VVPVLVRDGQPCGGGGGGEV-GTAAAQEKCGAPPAAACPL-PGYPAF-GPGSALGLFPAY 170 180 190 200 210 220 340 350 pF1KE0 AGEYSGGVLGANLLYGRTW NP_055 QHLASPALVSWNW 230 >>NP_001129743 (OMIM: 217095,611770) homeobox protein Nk (301 aa) initn: 569 init1: 332 opt: 383 Z-score: 211.9 bits: 47.5 E(85289): 4.6e-05 Smith-Waterman score: 474; 45.1% identity (62.5% similar) in 224 aa overlap (152-354:88-301) 130 140 150 160 170 pF1KE0 PAYTDGMRGGAATGWYGANPDPRYSSISRFMG-PSAGVNVAG-MGSLT-----GIADAAK :: :. :.:.:. .:. : :..... NP_001 AGGGGGDRKLDGSEPPGGPCEAVLEMDAERMGEPQPGLNAASPLGGGTRVPERGVGNSGD 60 70 80 90 100 110 180 190 200 210 220 230 pF1KE0 SLGPLHAAAAAAAPRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVK :. .. : ::: ::::::::: ::::::::.:::::::::::: ..:: :::: NP_001 SVRGGRSEQPKARQRRKPRVLFSQAQVLALERRFKQQRYLSAPEREHLASALQLTSTQVK 120 130 140 150 160 170 240 250 260 270 280 290 pF1KE0 IWFQNHRYKMKRQAKDKAAQQLQQEGGLGPPPPPPPSPRRVAVPVLVKDGKPCQN---GA :::::.::: ::: .::. :. : : .::::::::::.::::: . :: NP_001 IWFQNRRYKCKRQRQDKS---LELAGH-------PLTPRRVAVPVLVRDGKPCLGPGPGA 180 190 200 210 220 300 310 320 330 340 pF1KE0 ST-PTPGQAGPQP--------PAPTPAP--ELEELSPSPPALHGPGGGLAALDAAAGEYS . :.: .:. .: :: : .:: :: : : .. . .. . NP_001 PAFPSPYSAAVSPYSCYGGYSGAPYGAGYGTCYAGAPSGPAPHTPLASAGFGHGGQNATP 230 240 250 260 270 280 350 pF1KE0 GGVLGANLLYGRTW : :.:.: :.: NP_001 QGHLAATLQGVRAW 290 300 >>XP_006723629 (OMIM: 604612) PREDICTED: homeobox protei (202 aa) initn: 533 init1: 357 opt: 367 Z-score: 206.1 bits: 45.8 E(85289): 9.7e-05 Smith-Waterman score: 468; 52.3% identity (70.3% similar) in 155 aa overlap (137-288:3-145) 110 120 130 140 150 160 pF1KE0 MGSYCNGGLGNMGELPAYTDGMRGGAATGWYGANPDPRYSSISRFMGPSAGVNVAGMGSL ..:. :..: . . : .::. .: XP_006 MIFSATSPPKFSP-TLLHGLAAGAPPQDSSSK 10 20 30 170 180 190 200 210 220 pF1KE0 TGIADAAKSLG---PLHAAAAAAAPRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLA . .: .: .... :. .::::::::.::.:::::::.::.::::::::::: XP_006 SPEPSADESPDNDKETPGGGGDAGKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLA 40 50 60 70 80 90 230 240 250 260 270 280 pF1KE0 SMIHLTPTQVKIWFQNHRYKMKRQAKDKAAQQLQQEGGLGPPPPPPPSPRRVAVPVLVKD :.:.::::::::::::::::::: .: : : ::::::::::::.: XP_006 SLIRLTPTQVKIWFQNHRYKMKRARAEK-----------GMEVTPLPSPRRVAVPVLVRD 100 110 120 130 140 290 300 310 320 330 340 pF1KE0 GKPCQNGASTPTPGQAGPQPPAPTPAPELEELSPSPPALHGPGGGLAALDAAAGEYSGGV ::::. XP_006 GKPCHALKAQDLAAATFQAGIPFSAYSAQSLQHMQYNAQYSSASTPQYPTAHPLVQAQQW 150 160 170 180 190 200 >>NP_002500 (OMIM: 604612) homeobox protein Nkx-2.2 [Hom (273 aa) initn: 536 init1: 357 opt: 365 Z-score: 203.7 bits: 45.8 E(85289): 0.00013 Smith-Waterman score: 474; 46.9% identity (63.0% similar) in 192 aa overlap (117-288:36-216) 90 100 110 120 130 140 pF1KE0 AAAAATYHMPPGVSQFPHGAMGSYCNGGLGNMGELPAYTDGMRGGAATGWYGANP--DPR : : :: : : .: . : .: NP_002 TKTGFSVKDILDLPDTNDEEGSVAEGPEEENEGPEPAKRAGPLGQGALDAVQSLPLKNPF 10 20 30 40 50 60 150 160 170 180 pF1KE0 YSS----ISRFMGPSAGVNVAGMGSLTGIA---DAAKSLGP-----------LHAAAAAA :.: .:... . :.. . : .: ...:: : .... : NP_002 YDSSDNPYTRWLASTEGLQYSLHGLAAGAPPQDSSSKSPEPSADESPDNDKETPGGGGDA 70 80 90 100 110 120 190 200 210 220 230 240 pF1KE0 APRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKR . .::::::::.::.:::::::.::.::::::::::::.:.::::::::::::::::::: NP_002 GKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKMKR 130 140 150 160 170 180 250 260 270 280 290 300 pF1KE0 QAKDKAAQQLQQEGGLGPPPPPPPSPRRVAVPVLVKDGKPCQNGASTPTPGQAGPQPPAP .: : : ::::::::::::.:::::. NP_002 ARAEK-----------GMEVTPLPSPRRVAVPVLVRDGKPCHALKAQDLAAATFQAGIPF 190 200 210 220 230 310 320 330 340 350 pF1KE0 TPAPELEELSPSPPALHGPGGGLAALDAAAGEYSGGVLGANLLYGRTW NP_002 SAYSAQSLQHMQYNAQYSSASTPQYPTAHPLVQAQQWTW 240 250 260 270 >>NP_061815 (OMIM: 142992,612109) homeobox protein HMX1 (348 aa) initn: 303 init1: 215 opt: 301 Z-score: 171.5 bits: 40.2 E(85289): 0.0081 Smith-Waterman score: 352; 30.7% identity (51.7% similar) in 352 aa overlap (5-336:8-335) 10 20 30 40 50 pF1KE0 MSLSPKHTTPFSVSDILSPIEETYKKFSGAMDGAPPGLGAPLGAAAAYRAPPPGPSS : ..:: .:..: ::. . . : : :. : . NP_061 MPDELTEPGRATPARASSFL--IENLLAAEAKGAGRATQGDGSREDEEEDDDDPEDEDAE 10 20 30 40 50 60 70 80 90 100 pF1KE0 QAATVAGMQPSHAMAGHNAAAAAAAAAAAAAAAATY--HMPPGVSQ-FPHGAMGS----- :: .. . .:: . .. : : : . .: . ::: . : : :. NP_061 QARRRRLQRRRQLLAGTGPGGEARARALLGPGALGLGPRPPPGPGPPFALGCGGAARWYP 60 70 80 90 100 110 110 120 130 140 150 pF1KE0 YCNGGLGNMGELPAYTD------GMRGGAATGWYGANPDP----RYSSISRFMGPSAGVN .:: :. : : .: : . : : : . .: : : .. ::.::.. NP_061 RAHGGYGG-GLSPDTSDRDSPETGEEMGRAEGAWPRGPGPGAVQREAAELAARGPAAGTE 120 130 140 150 160 170 160 170 180 190 200 210 pF1KE0 VAGMGSLTGIADAAKSLGPLHAAAAAAAPRRKR-RVLFSQAQVYELERRFKQQKYLSAPE : . .:.. . : ........ :.:. :..::..::..:: : ..:::. : NP_061 EA-----SELAEVPAAAGETRGGVGVGGGRKKKTRTVFSRSQVFQLESTFDLKRYLSSAE 180 190 200 210 220 230 220 230 240 250 260 270 pF1KE0 REHLASMIHLTPTQVKIWFQNHRYKMKRQ-AKDKAAQQLQQEGGLGPPPPPPPSPRRVAV : ::. ..:: :::::::::.: : ::: : . : .:. :: . : : : NP_061 RAGLAASLQLTETQVKIWFQNRRNKWKRQLAAELEAASLS----------PPGAQRLVRV 240 250 260 270 280 280 290 300 310 320 330 pF1KE0 PVLVKDGKPCQNGASTPTPGQAGPQPPAPTPAPELEELSPSPPALHGPGGGLAALDAAAG ::: ... : .:. :. : ::.: : : .: :: : :::. ::: NP_061 PVLYHESPPAAAAAGPPATLPFPLAPAAPAPPPPLLGFSG---ALAYP---LAAFPAAAS 290 300 310 320 330 340 350 pF1KE0 EYSGGVLGANLLYGRTW NP_061 VPFLRAQMPGLV 340 354 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 04:28:50 2016 done: Tue Nov 8 04:28:52 2016 Total Scan time: 7.680 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]