RBMS2 ORF clone pFN21AE0704

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE0704

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Clone info.

Species

human

Clone Name

pFN21AE0704 Sequence (with vector) Restriction Map

Product ID

FHC24774

ORF Sequence

DNA sequence (1221 bp)
Protein sequence (407 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE0704

Symbol

RBMS2

Alias : SCR3

Description

RNA binding motif, single stranded interacting protein 2

Original Clone ID

cs02204

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1221 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 407 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS8923.1 5.7e-112 100.0 RBMS2 CCDS2213.1 1.5e-73 69.5 RBMS1 CCDS54557.1 3.3e-64 65.9 RBMS3 CCDS33724.1 3.8e-61 65.2 RBMS3 CCDS33726.1 9.9e-61 67.7 RBMS3 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR002343 56 71 PR00961 Paraneoplastic encephalomyelitis antigen IPR002343 140 155 PR00961 Paraneoplastic encephalomyelitis antigen IPR002343 155 167 PR00961 Paraneoplastic encephalomyelitis antigen HMMPfam IPR000504 58 118 PF00076 RNA recognition motif domain IPR000504 137 201 PF00076 RNA recognition motif domain HMMSmart IPR000504 57 125 SM00360 RNA recognition motif domain IPR000504 136 208 SM00360 RNA recognition motif domain ProfileScan IPR000504 56 129 PS50102 RNA recognition motif domain IPR000504 135 220 PS50102 RNA recognition motif domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_002889 407 602387 100.0 100.0 XP_011536942 407 602387 100.0 100.0 XP_006719607 407 602387 100.0 100.0 XP_016875264 388 602387 99.7 94.8 XP_005269118 388 602387 99.7 94.1 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE0704 Download

>KIEE0704  1221 bp
ATGCTGCTATCCGTGACTTCCAGGCCCGGGATTTCGACTTTTGGCTACAATAGAAACAAC
AAGAAGCCATATGTGTCACTGGCTCAGCAGATGGCACCACCTAGCCCAAGCAACAGTACA
CCTAACAGCAGTAGTGGAAGCAATGGAAATGACCAGCTGAGCAAAACCAACCTATACATC
CGAGGATTGCAACCAGGCACTACTGACCAAGATCTTGTCAAGCTGTGTCAGCCATATGGC
AAGATTGTTTCCACTAAGGCCATACTGGACAAGACCACAAACAAATGTAAAGGCTATGGC
TTTGTAGATTTTGACAGCCCTTCAGCAGCACAGAAAGCTGTAACAGCACTGAAGGCCAGC
GGTGTACAGGCACAGATGGCAAAGCAACAGGAACAGGACCCCACAAATTTATACATCTCA
AACCTCCCACTGTCAATGGATGAGCAGGAACTGGAGGGGATGCTGAAGCCCTTTGGCCAG
GTTATCTCCACCCGTATCCTTCGAGATACCAGTGGGACCAGCAGAGGTGTTGGCTTTGCA
AGGATGGAGTCCACAGAGAAGTGTGAAGCCATCATCACCCACTTTAATGGAAAATATATT
AAGACACCCCCTGGAGTACCAGCCCCATCCGATCCCTTGCTTTGCAAATTTGCTGATGGC
GGGCCAAAGAAACGACAGAACCAAGGAAAATTTGTGCAAAATGGACGGGCTTGGCCAAGG
AATGCAGACATGGGCGTCATGGCCTTGACCTATGACCCCACCACAGCTCTTCAGAATGGG
TTTTACCCAGCCCCCTATAACATCACCCCCAACAGGATGCTTGCTCAGTCTGCACTCTCC
CCATACCTTTCCTCTCCTGTGTCTTCGTATCAGAGAGTGACTCAGACATCTCCTCTACAA
GTACCTAACCCATCCTGGATGCACCACCATTCATACCTCATGCAGCCTTCAGGTTCAGTT
CTGACACCAGGGATGGACCATCCCATTTCTCTCCAGCCTGCCTCCATGATGGGACCCCTT
ACCCAGCAACTGGGCCATCTCTCCCTCAGCAGCACAGGCACGTATATGCCGACGGCTGCA
GCTATGCAAGGAGCTTACATCTCCCAGTACACCCCTGTGCCTTCTTCCAGTGTTTCAGTC
GAGGAGAGCAGCGGCCAACAGAACCAAGTGGCAGTGGACGCACCCTCAGAGCATGGGGTC
TATTCTTTCCAGTTCAACAAG

ORF Protein

Cloned ORF protein sequence for pFN21AE0704 Download

>KIEE0704  407 aa
MLLSVTSRPGISTFGYNRNNKKPYVSLAQQMAPPSPSNSTPNSSSGSNGNDQLSKTNLYI
RGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKAS
GVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILRDTSGTSRGVGFA
RMESTEKCEAIITHFNGKYIKTPPGVPAPSDPLLCKFADGGPKKRQNQGKFVQNGRAWPR
NADMGVMALTYDPTTALQNGFYPAPYNITPNRMLAQSALSPYLSSPVSSYQRVTQTSPLQ
VPNPSWMHHHSYLMQPSGSVLTPGMDHPISLQPASMMGPLTQQLGHLSLSSTGTYMPTAA
AMQGAYISQYTPVPSSSVSVEESSGQQNQVAVDAPSEHGVYSFQFNK

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE0704 Download

>pFN21AE0704  5926 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGCTGCTATCCGTGACTTCCAGGCCCGGGATTTC
GACTTTTGGCTACAATAGAAACAACAAGAAGCCATATGTGTCACTGGCTCAGCAGATGGC
ACCACCTAGCCCAAGCAACAGTACACCTAACAGCAGTAGTGGAAGCAATGGAAATGACCA
GCTGAGCAAAACCAACCTATACATCCGAGGATTGCAACCAGGCACTACTGACCAAGATCT
TGTCAAGCTGTGTCAGCCATATGGCAAGATTGTTTCCACTAAGGCCATACTGGACAAGAC
CACAAACAAATGTAAAGGCTATGGCTTTGTAGATTTTGACAGCCCTTCAGCAGCACAGAA
AGCTGTAACAGCACTGAAGGCCAGCGGTGTACAGGCACAGATGGCAAAGCAACAGGAACA
GGACCCCACAAATTTATACATCTCAAACCTCCCACTGTCAATGGATGAGCAGGAACTGGA
GGGGATGCTGAAGCCCTTTGGCCAGGTTATCTCCACCCGTATCCTTCGAGATACCAGTGG
GACCAGCAGAGGTGTTGGCTTTGCAAGGATGGAGTCCACAGAGAAGTGTGAAGCCATCAT
CACCCACTTTAATGGAAAATATATTAAGACACCCCCTGGAGTACCAGCCCCATCCGATCC
CTTGCTTTGCAAATTTGCTGATGGCGGGCCAAAGAAACGACAGAACCAAGGAAAATTTGT
GCAAAATGGACGGGCTTGGCCAAGGAATGCAGACATGGGCGTCATGGCCTTGACCTATGA
CCCCACCACAGCTCTTCAGAATGGGTTTTACCCAGCCCCCTATAACATCACCCCCAACAG
GATGCTTGCTCAGTCTGCACTCTCCCCATACCTTTCCTCTCCTGTGTCTTCGTATCAGAG
AGTGACTCAGACATCTCCTCTACAAGTACCTAACCCATCCTGGATGCACCACCATTCATA
CCTCATGCAGCCTTCAGGTTCAGTTCTGACACCAGGGATGGACCATCCCATTTCTCTCCA
GCCTGCCTCCATGATGGGACCCCTTACCCAGCAACTGGGCCATCTCTCCCTCAGCAGCAC
AGGCACGTATATGCCGACGGCTGCAGCTATGCAAGGAGCTTACATCTCCCAGTACACCCC
TGTGCCTTCTTCCAGTGTTTCAGTCGAGGAGAGCAGCGGCCAACAGAACCAAGTGGCAGT
GGACGCACCCTCAGAGCATGGGGTCTATTCTTTCCAGTTCAACAAGGTTTAAACGAATTC
GGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTG
CTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCAT
AACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAA
ACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCT
TTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTT
ATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAA
TGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATA
GCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTA
ATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGT
TTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATG
CTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATT
CCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTA
AAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGC
GGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAA
GTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGC
CGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTT
ACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACT
GCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCAC
AACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATA
CCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTA
TTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCG
GATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGAT
AAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGT
AAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGA
AATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACC
GACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAG
AATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACC
GTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACA
AAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGT
TTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACC
TGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATC
TCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGC
CCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACT
TATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTG
CTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTA
TCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCA
AACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAA
AAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACG
AAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCC
TTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAAC
CATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTT
GCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGT
TTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGT
ACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAAC
CGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT