FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE0704, 407 aa 1>>>pF1KE0704 407 - 407 aa - 407 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.2993+/-0.000382; mu= 16.2793+/- 0.024 mean_var=214.4565+/-47.241, 0's: 0 Z-trim(119.5): 284 B-trim: 1636 in 1/57 Lambda= 0.087580 statistics sampled from 33182 (33555) to 33182 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.737), E-opt: 0.2 (0.393), width: 16 Scan time: 8.920 The best scores are: opt bits E(85289) NP_002889 (OMIM: 602387) RNA-binding motif, single ( 407) 2722 356.6 6.3e-98 XP_011536942 (OMIM: 602387) PREDICTED: RNA-binding ( 407) 2722 356.6 6.3e-98 XP_006719607 (OMIM: 602387) PREDICTED: RNA-binding ( 407) 2722 356.6 6.3e-98 XP_016875264 (OMIM: 602387) PREDICTED: RNA-binding ( 388) 2583 339.0 1.2e-92 XP_005269118 (OMIM: 602387) PREDICTED: RNA-binding ( 388) 2556 335.6 1.3e-91 XP_006719606 (OMIM: 602387) PREDICTED: RNA-binding ( 429) 2549 334.8 2.5e-91 XP_011536941 (OMIM: 602387) PREDICTED: RNA-binding ( 414) 2365 311.5 2.4e-84 XP_005269117 (OMIM: 602387) PREDICTED: RNA-binding ( 419) 2365 311.5 2.4e-84 XP_006719605 (OMIM: 602387) PREDICTED: RNA-binding ( 448) 2365 311.6 2.5e-84 XP_005269116 (OMIM: 602387) PREDICTED: RNA-binding ( 448) 2365 311.6 2.5e-84 XP_006719604 (OMIM: 602387) PREDICTED: RNA-binding ( 477) 2365 311.6 2.6e-84 XP_011536939 (OMIM: 602387) PREDICTED: RNA-binding ( 458) 2226 294.0 5e-79 XP_005246797 (OMIM: 602310) PREDICTED: RNA-binding ( 419) 1856 247.2 5.6e-65 XP_011536940 (OMIM: 602387) PREDICTED: RNA-binding ( 430) 1846 246.0 1.4e-64 NP_058520 (OMIM: 602310) RNA-binding motif, single ( 406) 1831 244.0 4.9e-64 NP_001171183 (OMIM: 605786) RNA-binding motif, sin ( 433) 1615 216.8 8.3e-56 XP_016875267 (OMIM: 602387) PREDICTED: RNA-binding ( 237) 1552 208.4 1.5e-53 XP_011536944 (OMIM: 602387) PREDICTED: RNA-binding ( 352) 1550 208.4 2.2e-53 NP_001003793 (OMIM: 605786) RNA-binding motif, sin ( 437) 1544 207.8 4.2e-53 XP_016861667 (OMIM: 605786) PREDICTED: RNA-binding ( 435) 1542 207.6 5e-53 XP_005265117 (OMIM: 605786) PREDICTED: RNA-binding ( 436) 1542 207.6 5e-53 NP_055298 (OMIM: 605786) RNA-binding motif, single ( 420) 1534 206.5 9.9e-53 NP_001171182 (OMIM: 605786) RNA-binding motif, sin ( 421) 1534 206.5 9.9e-53 XP_016861668 (OMIM: 605786) PREDICTED: RNA-binding ( 420) 1532 206.3 1.2e-52 XP_005265119 (OMIM: 605786) PREDICTED: RNA-binding ( 419) 1529 205.9 1.5e-52 XP_005265118 (OMIM: 605786) PREDICTED: RNA-binding ( 420) 1529 205.9 1.5e-52 NP_001003792 (OMIM: 605786) RNA-binding motif, sin ( 419) 1527 205.6 1.8e-52 XP_016860115 (OMIM: 602310) PREDICTED: RNA-binding ( 402) 1515 204.1 5.1e-52 NP_002888 (OMIM: 602310) RNA-binding motif, single ( 403) 1511 203.6 7.2e-52 XP_016861669 (OMIM: 605786) PREDICTED: RNA-binding ( 404) 1463 197.5 4.9e-50 XP_005246796 (OMIM: 602310) PREDICTED: RNA-binding ( 420) 1462 197.4 5.4e-50 XP_016861670 (OMIM: 605786) PREDICTED: RNA-binding ( 403) 1461 197.3 5.8e-50 XP_005246798 (OMIM: 602310) PREDICTED: RNA-binding ( 419) 1460 197.2 6.4e-50 XP_005246795 (OMIM: 602310) PREDICTED: RNA-binding ( 421) 1459 197.0 7.1e-50 XP_005246794 (OMIM: 602310) PREDICTED: RNA-binding ( 422) 1455 196.5 1e-49 XP_016861671 (OMIM: 605786) PREDICTED: RNA-binding ( 370) 1452 196.1 1.2e-49 XP_016875265 (OMIM: 602387) PREDICTED: RNA-binding ( 307) 1195 163.5 6.5e-40 XP_016875266 (OMIM: 602387) PREDICTED: RNA-binding ( 296) 1188 162.6 1.2e-39 XP_005269123 (OMIM: 602387) PREDICTED: RNA-binding ( 214) 1177 161.0 2.6e-39 XP_005265122 (OMIM: 605786) PREDICTED: RNA-binding ( 328) 1003 139.3 1.4e-32 XP_005265120 (OMIM: 605786) PREDICTED: RNA-binding ( 342) 999 138.8 2e-32 XP_016869914 (OMIM: 601673) PREDICTED: ELAV-like p ( 346) 394 62.4 2e-09 NP_001164668 (OMIM: 601673) ELAV-like protein 2 is ( 346) 394 62.4 2e-09 NP_001164666 (OMIM: 601673) ELAV-like protein 2 is ( 346) 394 62.4 2e-09 XP_016869913 (OMIM: 601673) PREDICTED: ELAV-like p ( 346) 394 62.4 2e-09 XP_016869905 (OMIM: 601673) PREDICTED: ELAV-like p ( 375) 394 62.4 2.1e-09 XP_011516079 (OMIM: 601673) PREDICTED: ELAV-like p ( 375) 394 62.4 2.1e-09 XP_016869908 (OMIM: 601673) PREDICTED: ELAV-like p ( 359) 392 62.1 2.5e-09 XP_016869911 (OMIM: 601673) PREDICTED: ELAV-like p ( 359) 392 62.1 2.5e-09 XP_016869909 (OMIM: 601673) PREDICTED: ELAV-like p ( 359) 392 62.1 2.5e-09 >>NP_002889 (OMIM: 602387) RNA-binding motif, single-str (407 aa) initn: 2722 init1: 2722 opt: 2722 Z-score: 1879.0 bits: 356.6 E(85289): 6.3e-98 Smith-Waterman score: 2722; 100.0% identity (100.0% similar) in 407 aa overlap (1-407:1-407) 10 20 30 40 50 60 pF1KE0 MLLSVTSRPGISTFGYNRNNKKPYVSLAQQMAPPSPSNSTPNSSSGSNGNDQLSKTNLYI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 MLLSVTSRPGISTFGYNRNNKKPYVSLAQQMAPPSPSNSTPNSSSGSNGNDQLSKTNLYI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 RGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 RGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKAS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE0 GVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILRDTSGTSRGVGFA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 GVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILRDTSGTSRGVGFA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE0 RMESTEKCEAIITHFNGKYIKTPPGVPAPSDPLLCKFADGGPKKRQNQGKFVQNGRAWPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 RMESTEKCEAIITHFNGKYIKTPPGVPAPSDPLLCKFADGGPKKRQNQGKFVQNGRAWPR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE0 NADMGVMALTYDPTTALQNGFYPAPYNITPNRMLAQSALSPYLSSPVSSYQRVTQTSPLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 NADMGVMALTYDPTTALQNGFYPAPYNITPNRMLAQSALSPYLSSPVSSYQRVTQTSPLQ 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE0 VPNPSWMHHHSYLMQPSGSVLTPGMDHPISLQPASMMGPLTQQLGHLSLSSTGTYMPTAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 VPNPSWMHHHSYLMQPSGSVLTPGMDHPISLQPASMMGPLTQQLGHLSLSSTGTYMPTAA 310 320 330 340 350 360 370 380 390 400 pF1KE0 AMQGAYISQYTPVPSSSVSVEESSGQQNQVAVDAPSEHGVYSFQFNK ::::::::::::::::::::::::::::::::::::::::::::::: NP_002 AMQGAYISQYTPVPSSSVSVEESSGQQNQVAVDAPSEHGVYSFQFNK 370 380 390 400 >>XP_011536942 (OMIM: 602387) PREDICTED: RNA-binding mot (407 aa) initn: 2722 init1: 2722 opt: 2722 Z-score: 1879.0 bits: 356.6 E(85289): 6.3e-98 Smith-Waterman score: 2722; 100.0% identity (100.0% similar) in 407 aa overlap (1-407:1-407) 10 20 30 40 50 60 pF1KE0 MLLSVTSRPGISTFGYNRNNKKPYVSLAQQMAPPSPSNSTPNSSSGSNGNDQLSKTNLYI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MLLSVTSRPGISTFGYNRNNKKPYVSLAQQMAPPSPSNSTPNSSSGSNGNDQLSKTNLYI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 RGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 RGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKAS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE0 GVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILRDTSGTSRGVGFA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 GVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILRDTSGTSRGVGFA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE0 RMESTEKCEAIITHFNGKYIKTPPGVPAPSDPLLCKFADGGPKKRQNQGKFVQNGRAWPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 RMESTEKCEAIITHFNGKYIKTPPGVPAPSDPLLCKFADGGPKKRQNQGKFVQNGRAWPR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE0 NADMGVMALTYDPTTALQNGFYPAPYNITPNRMLAQSALSPYLSSPVSSYQRVTQTSPLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 NADMGVMALTYDPTTALQNGFYPAPYNITPNRMLAQSALSPYLSSPVSSYQRVTQTSPLQ 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE0 VPNPSWMHHHSYLMQPSGSVLTPGMDHPISLQPASMMGPLTQQLGHLSLSSTGTYMPTAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 VPNPSWMHHHSYLMQPSGSVLTPGMDHPISLQPASMMGPLTQQLGHLSLSSTGTYMPTAA 310 320 330 340 350 360 370 380 390 400 pF1KE0 AMQGAYISQYTPVPSSSVSVEESSGQQNQVAVDAPSEHGVYSFQFNK ::::::::::::::::::::::::::::::::::::::::::::::: XP_011 AMQGAYISQYTPVPSSSVSVEESSGQQNQVAVDAPSEHGVYSFQFNK 370 380 390 400 >>XP_006719607 (OMIM: 602387) PREDICTED: RNA-binding mot (407 aa) initn: 2722 init1: 2722 opt: 2722 Z-score: 1879.0 bits: 356.6 E(85289): 6.3e-98 Smith-Waterman score: 2722; 100.0% identity (100.0% similar) in 407 aa overlap (1-407:1-407) 10 20 30 40 50 60 pF1KE0 MLLSVTSRPGISTFGYNRNNKKPYVSLAQQMAPPSPSNSTPNSSSGSNGNDQLSKTNLYI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 MLLSVTSRPGISTFGYNRNNKKPYVSLAQQMAPPSPSNSTPNSSSGSNGNDQLSKTNLYI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 RGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 RGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKAS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE0 GVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILRDTSGTSRGVGFA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 GVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILRDTSGTSRGVGFA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE0 RMESTEKCEAIITHFNGKYIKTPPGVPAPSDPLLCKFADGGPKKRQNQGKFVQNGRAWPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 RMESTEKCEAIITHFNGKYIKTPPGVPAPSDPLLCKFADGGPKKRQNQGKFVQNGRAWPR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE0 NADMGVMALTYDPTTALQNGFYPAPYNITPNRMLAQSALSPYLSSPVSSYQRVTQTSPLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 NADMGVMALTYDPTTALQNGFYPAPYNITPNRMLAQSALSPYLSSPVSSYQRVTQTSPLQ 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE0 VPNPSWMHHHSYLMQPSGSVLTPGMDHPISLQPASMMGPLTQQLGHLSLSSTGTYMPTAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 VPNPSWMHHHSYLMQPSGSVLTPGMDHPISLQPASMMGPLTQQLGHLSLSSTGTYMPTAA 310 320 330 340 350 360 370 380 390 400 pF1KE0 AMQGAYISQYTPVPSSSVSVEESSGQQNQVAVDAPSEHGVYSFQFNK ::::::::::::::::::::::::::::::::::::::::::::::: XP_006 AMQGAYISQYTPVPSSSVSVEESSGQQNQVAVDAPSEHGVYSFQFNK 370 380 390 400 >>XP_016875264 (OMIM: 602387) PREDICTED: RNA-binding mot (388 aa) initn: 2583 init1: 2583 opt: 2583 Z-score: 1784.3 bits: 339.0 E(85289): 1.2e-92 Smith-Waterman score: 2583; 99.7% identity (100.0% similar) in 386 aa overlap (22-407:3-388) 10 20 30 40 50 60 pF1KE0 MLLSVTSRPGISTFGYNRNNKKPYVSLAQQMAPPSPSNSTPNSSSGSNGNDQLSKTNLYI .:::::::::::::::::::::::::::::::::::::: XP_016 MIQPYVSLAQQMAPPSPSNSTPNSSSGSNGNDQLSKTNLYI 10 20 30 40 70 80 90 100 110 120 pF1KE0 RGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKAS 50 60 70 80 90 100 130 140 150 160 170 180 pF1KE0 GVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILRDTSGTSRGVGFA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 GVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILRDTSGTSRGVGFA 110 120 130 140 150 160 190 200 210 220 230 240 pF1KE0 RMESTEKCEAIITHFNGKYIKTPPGVPAPSDPLLCKFADGGPKKRQNQGKFVQNGRAWPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RMESTEKCEAIITHFNGKYIKTPPGVPAPSDPLLCKFADGGPKKRQNQGKFVQNGRAWPR 170 180 190 200 210 220 250 260 270 280 290 300 pF1KE0 NADMGVMALTYDPTTALQNGFYPAPYNITPNRMLAQSALSPYLSSPVSSYQRVTQTSPLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 NADMGVMALTYDPTTALQNGFYPAPYNITPNRMLAQSALSPYLSSPVSSYQRVTQTSPLQ 230 240 250 260 270 280 310 320 330 340 350 360 pF1KE0 VPNPSWMHHHSYLMQPSGSVLTPGMDHPISLQPASMMGPLTQQLGHLSLSSTGTYMPTAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VPNPSWMHHHSYLMQPSGSVLTPGMDHPISLQPASMMGPLTQQLGHLSLSSTGTYMPTAA 290 300 310 320 330 340 370 380 390 400 pF1KE0 AMQGAYISQYTPVPSSSVSVEESSGQQNQVAVDAPSEHGVYSFQFNK ::::::::::::::::::::::::::::::::::::::::::::::: XP_016 AMQGAYISQYTPVPSSSVSVEESSGQQNQVAVDAPSEHGVYSFQFNK 350 360 370 380 >>XP_005269118 (OMIM: 602387) PREDICTED: RNA-binding mot (388 aa) initn: 2658 init1: 2556 opt: 2556 Z-score: 1765.9 bits: 335.6 E(85289): 1.3e-91 Smith-Waterman score: 2556; 99.7% identity (100.0% similar) in 383 aa overlap (1-383:1-383) 10 20 30 40 50 60 pF1KE0 MLLSVTSRPGISTFGYNRNNKKPYVSLAQQMAPPSPSNSTPNSSSGSNGNDQLSKTNLYI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MLLSVTSRPGISTFGYNRNNKKPYVSLAQQMAPPSPSNSTPNSSSGSNGNDQLSKTNLYI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 RGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 RGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKAS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE0 GVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILRDTSGTSRGVGFA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 GVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILRDTSGTSRGVGFA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE0 RMESTEKCEAIITHFNGKYIKTPPGVPAPSDPLLCKFADGGPKKRQNQGKFVQNGRAWPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 RMESTEKCEAIITHFNGKYIKTPPGVPAPSDPLLCKFADGGPKKRQNQGKFVQNGRAWPR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE0 NADMGVMALTYDPTTALQNGFYPAPYNITPNRMLAQSALSPYLSSPVSSYQRVTQTSPLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 NADMGVMALTYDPTTALQNGFYPAPYNITPNRMLAQSALSPYLSSPVSSYQRVTQTSPLQ 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE0 VPNPSWMHHHSYLMQPSGSVLTPGMDHPISLQPASMMGPLTQQLGHLSLSSTGTYMPTAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 VPNPSWMHHHSYLMQPSGSVLTPGMDHPISLQPASMMGPLTQQLGHLSLSSTGTYMPTAA 310 320 330 340 350 360 370 380 390 400 pF1KE0 AMQGAYISQYTPVPSSSVSVEESSGQQNQVAVDAPSEHGVYSFQFNK :::::::::::::::::::::.: XP_005 AMQGAYISQYTPVPSSSVSVEDSPPHLY 370 380 >>XP_006719606 (OMIM: 602387) PREDICTED: RNA-binding mot (429 aa) initn: 2549 init1: 2549 opt: 2549 Z-score: 1760.7 bits: 334.8 E(85289): 2.5e-91 Smith-Waterman score: 2549; 100.0% identity (100.0% similar) in 381 aa overlap (1-381:1-381) 10 20 30 40 50 60 pF1KE0 MLLSVTSRPGISTFGYNRNNKKPYVSLAQQMAPPSPSNSTPNSSSGSNGNDQLSKTNLYI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 MLLSVTSRPGISTFGYNRNNKKPYVSLAQQMAPPSPSNSTPNSSSGSNGNDQLSKTNLYI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 RGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 RGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKAS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE0 GVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILRDTSGTSRGVGFA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 GVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILRDTSGTSRGVGFA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE0 RMESTEKCEAIITHFNGKYIKTPPGVPAPSDPLLCKFADGGPKKRQNQGKFVQNGRAWPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 RMESTEKCEAIITHFNGKYIKTPPGVPAPSDPLLCKFADGGPKKRQNQGKFVQNGRAWPR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE0 NADMGVMALTYDPTTALQNGFYPAPYNITPNRMLAQSALSPYLSSPVSSYQRVTQTSPLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 NADMGVMALTYDPTTALQNGFYPAPYNITPNRMLAQSALSPYLSSPVSSYQRVTQTSPLQ 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE0 VPNPSWMHHHSYLMQPSGSVLTPGMDHPISLQPASMMGPLTQQLGHLSLSSTGTYMPTAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 VPNPSWMHHHSYLMQPSGSVLTPGMDHPISLQPASMMGPLTQQLGHLSLSSTGTYMPTAA 310 320 330 340 350 360 370 380 390 400 pF1KE0 AMQGAYISQYTPVPSSSVSVEESSGQQNQVAVDAPSEHGVYSFQFNK ::::::::::::::::::::: XP_006 AMQGAYISQYTPVPSSSVSVEAWAWKKKSLRSCPLLLLMEPGGTITFFVCYIQGDQKNFS 370 380 390 400 410 420 >>XP_011536941 (OMIM: 602387) PREDICTED: RNA-binding mot (414 aa) initn: 2365 init1: 2365 opt: 2365 Z-score: 1635.2 bits: 311.5 E(85289): 2.4e-84 Smith-Waterman score: 2365; 100.0% identity (100.0% similar) in 352 aa overlap (1-352:1-352) 10 20 30 40 50 60 pF1KE0 MLLSVTSRPGISTFGYNRNNKKPYVSLAQQMAPPSPSNSTPNSSSGSNGNDQLSKTNLYI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MLLSVTSRPGISTFGYNRNNKKPYVSLAQQMAPPSPSNSTPNSSSGSNGNDQLSKTNLYI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 RGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 RGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKAS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE0 GVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILRDTSGTSRGVGFA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 GVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILRDTSGTSRGVGFA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE0 RMESTEKCEAIITHFNGKYIKTPPGVPAPSDPLLCKFADGGPKKRQNQGKFVQNGRAWPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 RMESTEKCEAIITHFNGKYIKTPPGVPAPSDPLLCKFADGGPKKRQNQGKFVQNGRAWPR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE0 NADMGVMALTYDPTTALQNGFYPAPYNITPNRMLAQSALSPYLSSPVSSYQRVTQTSPLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 NADMGVMALTYDPTTALQNGFYPAPYNITPNRMLAQSALSPYLSSPVSSYQRVTQTSPLQ 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE0 VPNPSWMHHHSYLMQPSGSVLTPGMDHPISLQPASMMGPLTQQLGHLSLSSTGTYMPTAA :::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 VPNPSWMHHHSYLMQPSGSVLTPGMDHPISLQPASMMGPLTQQLGHLSLSSTVYADGCSY 310 320 330 340 350 360 370 380 390 400 pF1KE0 AMQGAYISQYTPVPSSSVSVEESSGQQNQVAVDAPSEHGVYSFQFNK XP_011 ARSLHLPVHPCAFFQCFSRGEQRPTEPSGSGRTLRAWGLFFPVQQVTDSPPHLY 370 380 390 400 410 >>XP_005269117 (OMIM: 602387) PREDICTED: RNA-binding mot (419 aa) initn: 2365 init1: 2365 opt: 2365 Z-score: 1635.1 bits: 311.5 E(85289): 2.4e-84 Smith-Waterman score: 2365; 100.0% identity (100.0% similar) in 352 aa overlap (1-352:1-352) 10 20 30 40 50 60 pF1KE0 MLLSVTSRPGISTFGYNRNNKKPYVSLAQQMAPPSPSNSTPNSSSGSNGNDQLSKTNLYI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MLLSVTSRPGISTFGYNRNNKKPYVSLAQQMAPPSPSNSTPNSSSGSNGNDQLSKTNLYI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 RGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 RGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKAS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE0 GVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILRDTSGTSRGVGFA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 GVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILRDTSGTSRGVGFA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE0 RMESTEKCEAIITHFNGKYIKTPPGVPAPSDPLLCKFADGGPKKRQNQGKFVQNGRAWPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 RMESTEKCEAIITHFNGKYIKTPPGVPAPSDPLLCKFADGGPKKRQNQGKFVQNGRAWPR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE0 NADMGVMALTYDPTTALQNGFYPAPYNITPNRMLAQSALSPYLSSPVSSYQRVTQTSPLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 NADMGVMALTYDPTTALQNGFYPAPYNITPNRMLAQSALSPYLSSPVSSYQRVTQTSPLQ 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE0 VPNPSWMHHHSYLMQPSGSVLTPGMDHPISLQPASMMGPLTQQLGHLSLSSTGTYMPTAA :::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 VPNPSWMHHHSYLMQPSGSVLTPGMDHPISLQPASMMGPLTQQLGHLSLSSTVYADGCSY 310 320 330 340 350 360 370 380 390 400 pF1KE0 AMQGAYISQYTPVPSSSVSVEESSGQQNQVAVDAPSEHGVYSFQFNK XP_005 ARSLHLPVHPCAFFQCFSRGFPSPSLLNRNEFLEILMLPDSRGLTRNGDHPSALLRTNT 370 380 390 400 410 >>XP_006719605 (OMIM: 602387) PREDICTED: RNA-binding mot (448 aa) initn: 2365 init1: 2365 opt: 2365 Z-score: 1634.9 bits: 311.6 E(85289): 2.5e-84 Smith-Waterman score: 2365; 100.0% identity (100.0% similar) in 352 aa overlap (1-352:1-352) 10 20 30 40 50 60 pF1KE0 MLLSVTSRPGISTFGYNRNNKKPYVSLAQQMAPPSPSNSTPNSSSGSNGNDQLSKTNLYI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 MLLSVTSRPGISTFGYNRNNKKPYVSLAQQMAPPSPSNSTPNSSSGSNGNDQLSKTNLYI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 RGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 RGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKAS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE0 GVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILRDTSGTSRGVGFA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 GVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILRDTSGTSRGVGFA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE0 RMESTEKCEAIITHFNGKYIKTPPGVPAPSDPLLCKFADGGPKKRQNQGKFVQNGRAWPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 RMESTEKCEAIITHFNGKYIKTPPGVPAPSDPLLCKFADGGPKKRQNQGKFVQNGRAWPR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE0 NADMGVMALTYDPTTALQNGFYPAPYNITPNRMLAQSALSPYLSSPVSSYQRVTQTSPLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 NADMGVMALTYDPTTALQNGFYPAPYNITPNRMLAQSALSPYLSSPVSSYQRVTQTSPLQ 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE0 VPNPSWMHHHSYLMQPSGSVLTPGMDHPISLQPASMMGPLTQQLGHLSLSSTGTYMPTAA :::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 VPNPSWMHHHSYLMQPSGSVLTPGMDHPISLQPASMMGPLTQQLGHLSLSSTVYADGCSY 310 320 330 340 350 360 370 380 390 400 pF1KE0 AMQGAYISQYTPVPSSSVSVEESSGQQNQVAVDAPSEHGVYSFQFNK XP_006 ARSLHLPVHPCAFFQCFSRGLGLEKEISTFLPFTIADGAWGNHHFFCVLHSRRSKKLFFF 370 380 390 400 410 420 >>XP_005269116 (OMIM: 602387) PREDICTED: RNA-binding mot (448 aa) initn: 2365 init1: 2365 opt: 2365 Z-score: 1634.9 bits: 311.6 E(85289): 2.5e-84 Smith-Waterman score: 2365; 100.0% identity (100.0% similar) in 352 aa overlap (1-352:1-352) 10 20 30 40 50 60 pF1KE0 MLLSVTSRPGISTFGYNRNNKKPYVSLAQQMAPPSPSNSTPNSSSGSNGNDQLSKTNLYI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MLLSVTSRPGISTFGYNRNNKKPYVSLAQQMAPPSPSNSTPNSSSGSNGNDQLSKTNLYI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 RGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 RGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKAS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE0 GVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILRDTSGTSRGVGFA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 GVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILRDTSGTSRGVGFA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE0 RMESTEKCEAIITHFNGKYIKTPPGVPAPSDPLLCKFADGGPKKRQNQGKFVQNGRAWPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 RMESTEKCEAIITHFNGKYIKTPPGVPAPSDPLLCKFADGGPKKRQNQGKFVQNGRAWPR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE0 NADMGVMALTYDPTTALQNGFYPAPYNITPNRMLAQSALSPYLSSPVSSYQRVTQTSPLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 NADMGVMALTYDPTTALQNGFYPAPYNITPNRMLAQSALSPYLSSPVSSYQRVTQTSPLQ 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE0 VPNPSWMHHHSYLMQPSGSVLTPGMDHPISLQPASMMGPLTQQLGHLSLSSTGTYMPTAA :::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 VPNPSWMHHHSYLMQPSGSVLTPGMDHPISLQPASMMGPLTQQLGHLSLSSTVYADGCSY 310 320 330 340 350 360 370 380 390 400 pF1KE0 AMQGAYISQYTPVPSSSVSVEESSGQQNQVAVDAPSEHGVYSFQFNK XP_005 ARSLHLPVHPCAFFQCFSRGEQRPTEPSGSGRTLRAWGLFFPVQQVTVGFPSPSLLNRNE 370 380 390 400 410 420 407 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 01:43:54 2016 done: Tue Nov 8 01:43:55 2016 Total Scan time: 8.920 Total Display time: 0.030 Function used was FASTA [36.3.4 Apr, 2011]