SSBP4 ORF clone pFN21AB8211

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AB8211

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Clone info.

Species

human

Clone Name

pFN21AB8211 Sequence (with vector) Restriction Map

Product ID

FHC02666

Flexi Clone PID

FXC02666

ORF Sequence

DNA sequence (1089 bp)
Protein sequence (363 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB464208]

Gene

KIBB8211

Symbol

SSBP4

Description

single stranded DNA binding protein 4, transcript variant 2

Original Clone ID

cp00571

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1089 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 363 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS32960.1 1.3e-58 100.0 SSBP4 CCDS30726.1 1e-43 73.0 SSBP3 CCDS4056.1 3e-43 73.7 SSBP2 CCDS75268.1 1.1e-42 72.4 SSBP2 CCDS590.1 6.4e-41 69.7 SSBP3 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR008116 9 28 PR01743 Sequence-specific single-strand DNA-binding protein IPR008116 30 45 PR01743 Sequence-specific single-strand DNA-binding protein IPR008116 46 63 PR01743 Sequence-specific single-strand DNA-binding protein IPR008116 64 77 PR01743 Sequence-specific single-strand DNA-binding protein IPR008116 78 93 PR01743 Sequence-specific single-strand DNA-binding protein HMMPfam IPR007591 82 123 PF04503 Single-stranded DNA-binding protein IPR007591 123 345 PF04503 Single-stranded DNA-binding protein HMMSmart IPR006594 17 49 SM00667 LisH dimerisation motif ProfileScan IPR006594 17 49 PS50896 LisH dimerisation motif
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001009998 363 607391 100.0 100.0 XP_006722731 413 607391 99.7 98.1 XP_016881925 496 607391 99.7 98.1 XP_016881926 385 607391 99.7 94.8 XP_016881924 507 607391 95.8 97.2 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB8211 Download

>KIBB8211  1089 bp
ATGTACGCCAAGGGGGGCAAGGGTTCGGCCGTGCCCTCCGACAGCCAGGCCCGCGAGAAG
TTGGCGCTGTACGTTTATGAGTACCTGCTGCACATCGGTGCCCAGAAGTCAGCCCAGACC
TTCCTGTCTGAGATCCGATGGGAGAAGAACATCACGCTGGGGGAGCCCCCTGGGTTCCTG
CACTCCTGGTGGTGCGTCTTCTGGGACCTGTACTGCGCGGCGCCTGACAGAAGAGAGGCC
TGCGAGCACTCCGGCGAGGCCAAGGCCTTCCAGGACTATAGTGCTGCAGCCGCCCCCAGC
CCCGTTATGGGGAGTATGGCCCCAGGTGACACAATGGCCGCAGGCTCCATGGCGGCTGGC
TTCTTCCAGCCCTTCATGTCACCGCGCTTCCCAGGGGGCCCCCGGCCCACCCTGCGGATG
CCGAGTCAGCCTCCCGCAGGCCTCCCTGGCTCCCAGCCCCTCCTCCCTGGCGCCATGGAG
CCCTCCCCACGAGCCCAGGGGCATCCGAGCATGGGCGGCCCAATGCAGAGGGTGACGCCT
CCTCGTGGCATGGCCAGCGTGGGGCCCCAGAGCTATGGAGGTGGCATGCGACCCCCACCC
AACTCCCTCGCCGGCCCAGGCCTGCCTGCCATGAACATGGGCCCAGGAGTTCGTGGCCCG
TGGGCCAGCCCCAGTGGAAACTCGATCCCCTACTCCTCCTCATCCCCCGGCAGCTACACC
GGACCCCCAGGAGGAGGTGGGCCCCCTGGAACACCCATCATGCCTAGCCCTGGAGATTCC
ACCAACTCCAGCGAAAACATGTACACTATCATGAACCCCATCGGGCAGGGCGCCGGCAGG
GCTAATTTCCCGCTCGGCCCTGGCCCGGAGGGCCCCATGGCCGCCATGAGCGCGATGGAG
CCTCACCACGTGAACGGATCCCTGGGCTCGGGCGACATGGACGGGTTGCCGAAGAGTTCC
CCCGGCGCCGTGGCCGGCCTGAGCAACGCCCCGGGCACCCCGCGGGACGACGGCGAGATG
GCGGCCGCCGGGACCTTCCTGCACCCGTTCCCGAGCGAAAGCTACTCGCCAGGGATGACC
ATGAGCGTG

ORF Protein

Cloned ORF protein sequence for pFN21AB8211 Download

>KIBB8211  363 aa
MYAKGGKGSAVPSDSQAREKLALYVYEYLLHIGAQKSAQTFLSEIRWEKNITLGEPPGFL
HSWWCVFWDLYCAAPDRREACEHSGEAKAFQDYSAAAAPSPVMGSMAPGDTMAAGSMAAG
FFQPFMSPRFPGGPRPTLRMPSQPPAGLPGSQPLLPGAMEPSPRAQGHPSMGGPMQRVTP
PRGMASVGPQSYGGGMRPPPNSLAGPGLPAMNMGPGVRGPWASPSGNSIPYSSSSPGSYT
GPPGGGGPPGTPIMPSPGDSTNSSENMYTIMNPIGQGAGRANFPLGPGPEGPMAAMSAME
PHHVNGSLGSGDMDGLPKSSPGAVAGLSNAPGTPRDDGEMAAAGTFLHPFPSESYSPGMT
MSV

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB8211 Download

>pFN21AB8211  5794 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGTACGCCAAGGGGGGCAAGGGTTCGGCCGTGCC
CTCCGACAGCCAGGCCCGCGAGAAGTTGGCGCTGTACGTTTATGAGTACCTGCTGCACAT
CGGTGCCCAGAAGTCAGCCCAGACCTTCCTGTCTGAGATCCGATGGGAGAAGAACATCAC
GCTGGGGGAGCCCCCTGGGTTCCTGCACTCCTGGTGGTGCGTCTTCTGGGACCTGTACTG
CGCGGCGCCTGACAGAAGAGAGGCCTGCGAGCACTCCGGCGAGGCCAAGGCCTTCCAGGA
CTATAGTGCTGCAGCCGCCCCCAGCCCCGTTATGGGGAGTATGGCCCCAGGTGACACAAT
GGCCGCAGGCTCCATGGCGGCTGGCTTCTTCCAGCCCTTCATGTCACCGCGCTTCCCAGG
GGGCCCCCGGCCCACCCTGCGGATGCCGAGTCAGCCTCCCGCAGGCCTCCCTGGCTCCCA
GCCCCTCCTCCCTGGCGCCATGGAGCCCTCCCCACGAGCCCAGGGGCATCCGAGCATGGG
CGGCCCAATGCAGAGGGTGACGCCTCCTCGTGGCATGGCCAGCGTGGGGCCCCAGAGCTA
TGGAGGTGGCATGCGACCCCCACCCAACTCCCTCGCCGGCCCAGGCCTGCCTGCCATGAA
CATGGGCCCAGGAGTTCGTGGCCCGTGGGCCAGCCCCAGTGGAAACTCGATCCCCTACTC
CTCCTCATCCCCCGGCAGCTACACCGGACCCCCAGGAGGAGGTGGGCCCCCTGGAACACC
CATCATGCCTAGCCCTGGAGATTCCACCAACTCCAGCGAAAACATGTACACTATCATGAA
CCCCATCGGGCAGGGCGCCGGCAGGGCTAATTTCCCGCTCGGCCCTGGCCCGGAGGGCCC
CATGGCCGCCATGAGCGCGATGGAGCCTCACCACGTGAACGGATCCCTGGGCTCGGGCGA
CATGGACGGGTTGCCGAAGAGTTCCCCCGGCGCCGTGGCCGGCCTGAGCAACGCCCCGGG
CACCCCGCGGGACGACGGCGAGATGGCGGCCGCCGGGACCTTCCTGCACCCGTTCCCGAG
CGAAAGCTACTCGCCAGGGATGACCATGAGCGTGGTTTAAACGAATTCGGGCTCGGTACC
CGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCC
GAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGG
CGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGA
ATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACC
ATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTT
CAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATC
GAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTG
ACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAG
ACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAA
ATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATAT
TGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCG
GCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAA
GATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTT
GAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGT
GGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTAT
TCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATG
ACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTA
CTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGAT
CATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAG
CGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAA
CTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCA
GGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCC
GGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGT
ATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATC
GCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACG
CCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATA
ACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCG
CGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCT
CAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAA
GCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTC
TCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGT
AGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCG
CCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGG
CAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCT
TGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGC
TGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCG
CTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTC
AAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTT
AAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCG
GAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGG
CAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTC
ATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTT
TTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGA
TTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCG
GCCACGATGCGTCCGGCGTAGAGGATCGAGATCT