SSBP4 ORF clone FXC02666

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Flexi ORF Clone FXC02666

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Clone info.

Species

human

Clone Name

pF1KB8211 Sequence (with vector) Restriction Map

Product ID

FXC02666

HaloTag Clone PID

FHC02666

ORF Sequence

DNA sequence (1089 bp)
Protein sequence (363 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB464208]

Gene

KIBB8211

Symbol

SSBP4

Description

single stranded DNA binding protein 4, transcript variant 2

Original Clone ID

cp00571

Features of the cloned ORF sequence

Description

Length: 1089 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 363 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS32960.1 1.3e-58 100.0 SSBP4 CCDS30726.1 1e-43 73.0 SSBP3 CCDS4056.1 3e-43 73.7 SSBP2 CCDS75268.1 1.1e-42 72.4 SSBP2 CCDS590.1 6.4e-41 69.7 SSBP3 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR008116 9 28 PR01743 Sequence-specific single-strand DNA-binding protein IPR008116 30 45 PR01743 Sequence-specific single-strand DNA-binding protein IPR008116 46 63 PR01743 Sequence-specific single-strand DNA-binding protein IPR008116 64 77 PR01743 Sequence-specific single-strand DNA-binding protein IPR008116 78 93 PR01743 Sequence-specific single-strand DNA-binding protein HMMPfam IPR007591 82 123 PF04503 Single-stranded DNA-binding protein IPR007591 123 345 PF04503 Single-stranded DNA-binding protein HMMSmart IPR006594 17 49 SM00667 LisH dimerisation motif ProfileScan IPR006594 17 49 PS50896 LisH dimerisation motif
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001009998 363 607391 100.0 100.0 XP_006722731 413 607391 99.7 98.1 XP_016881925 496 607391 99.7 98.1 XP_016881926 385 607391 99.7 94.8 XP_016881924 507 607391 95.8 97.2 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB8211 Download

>KIBB8211  1089 bp
ATGTACGCCAAGGGGGGCAAGGGTTCGGCCGTGCCCTCCGACAGCCAGGCCCGCGAGAAG
TTGGCGCTGTACGTTTATGAGTACCTGCTGCACATCGGTGCCCAGAAGTCAGCCCAGACC
TTCCTGTCTGAGATCCGATGGGAGAAGAACATCACGCTGGGGGAGCCCCCTGGGTTCCTG
CACTCCTGGTGGTGCGTCTTCTGGGACCTGTACTGCGCGGCGCCTGACAGAAGAGAGGCC
TGCGAGCACTCCGGCGAGGCCAAGGCCTTCCAGGACTATAGTGCTGCAGCCGCCCCCAGC
CCCGTTATGGGGAGTATGGCCCCAGGTGACACAATGGCCGCAGGCTCCATGGCGGCTGGC
TTCTTCCAGCCCTTCATGTCACCGCGCTTCCCAGGGGGCCCCCGGCCCACCCTGCGGATG
CCGAGTCAGCCTCCCGCAGGCCTCCCTGGCTCCCAGCCCCTCCTCCCTGGCGCCATGGAG
CCCTCCCCACGAGCCCAGGGGCATCCGAGCATGGGCGGCCCAATGCAGAGGGTGACGCCT
CCTCGTGGCATGGCCAGCGTGGGGCCCCAGAGCTATGGAGGTGGCATGCGACCCCCACCC
AACTCCCTCGCCGGCCCAGGCCTGCCTGCCATGAACATGGGCCCAGGAGTTCGTGGCCCG
TGGGCCAGCCCCAGTGGAAACTCGATCCCCTACTCCTCCTCATCCCCCGGCAGCTACACC
GGACCCCCAGGAGGAGGTGGGCCCCCTGGAACACCCATCATGCCTAGCCCTGGAGATTCC
ACCAACTCCAGCGAAAACATGTACACTATCATGAACCCCATCGGGCAGGGCGCCGGCAGG
GCTAATTTCCCGCTCGGCCCTGGCCCGGAGGGCCCCATGGCCGCCATGAGCGCGATGGAG
CCTCACCACGTGAACGGATCCCTGGGCTCGGGCGACATGGACGGGTTGCCGAAGAGTTCC
CCCGGCGCCGTGGCCGGCCTGAGCAACGCCCCGGGCACCCCGCGGGACGACGGCGAGATG
GCGGCCGCCGGGACCTTCCTGCACCCGTTCCCGAGCGAAAGCTACTCGCCAGGGATGACC
ATGAGCGTG

ORF Protein

Cloned ORF protein sequence for pF1KB8211 Download

>KIBB8211  363 aa
MYAKGGKGSAVPSDSQAREKLALYVYEYLLHIGAQKSAQTFLSEIRWEKNITLGEPPGFL
HSWWCVFWDLYCAAPDRREACEHSGEAKAFQDYSAAAAPSPVMGSMAPGDTMAAGSMAAG
FFQPFMSPRFPGGPRPTLRMPSQPPAGLPGSQPLLPGAMEPSPRAQGHPSMGGPMQRVTP
PRGMASVGPQSYGGGMRPPPNSLAGPGLPAMNMGPGVRGPWASPSGNSIPYSSSSPGSYT
GPPGGGGPPGTPIMPSPGDSTNSSENMYTIMNPIGQGAGRANFPLGPGPEGPMAAMSAME
PHHVNGSLGSGDMDGLPKSSPGAVAGLSNAPGTPRDDGEMAAAGTFLHPFPSESYSPGMT
MSV

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB8211 Download

>pF1KB8211  4202 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGTACGCCAAG
GGGGGCAAGGGTTCGGCCGTGCCCTCCGACAGCCAGGCCCGCGAGAAGTTGGCGCTGTAC
GTTTATGAGTACCTGCTGCACATCGGTGCCCAGAAGTCAGCCCAGACCTTCCTGTCTGAG
ATCCGATGGGAGAAGAACATCACGCTGGGGGAGCCCCCTGGGTTCCTGCACTCCTGGTGG
TGCGTCTTCTGGGACCTGTACTGCGCGGCGCCTGACAGAAGAGAGGCCTGCGAGCACTCC
GGCGAGGCCAAGGCCTTCCAGGACTATAGTGCTGCAGCCGCCCCCAGCCCCGTTATGGGG
AGTATGGCCCCAGGTGACACAATGGCCGCAGGCTCCATGGCGGCTGGCTTCTTCCAGCCC
TTCATGTCACCGCGCTTCCCAGGGGGCCCCCGGCCCACCCTGCGGATGCCGAGTCAGCCT
CCCGCAGGCCTCCCTGGCTCCCAGCCCCTCCTCCCTGGCGCCATGGAGCCCTCCCCACGA
GCCCAGGGGCATCCGAGCATGGGCGGCCCAATGCAGAGGGTGACGCCTCCTCGTGGCATG
GCCAGCGTGGGGCCCCAGAGCTATGGAGGTGGCATGCGACCCCCACCCAACTCCCTCGCC
GGCCCAGGCCTGCCTGCCATGAACATGGGCCCAGGAGTTCGTGGCCCGTGGGCCAGCCCC
AGTGGAAACTCGATCCCCTACTCCTCCTCATCCCCCGGCAGCTACACCGGACCCCCAGGA
GGAGGTGGGCCCCCTGGAACACCCATCATGCCTAGCCCTGGAGATTCCACCAACTCCAGC
GAAAACATGTACACTATCATGAACCCCATCGGGCAGGGCGCCGGCAGGGCTAATTTCCCG
CTCGGCCCTGGCCCGGAGGGCCCCATGGCCGCCATGAGCGCGATGGAGCCTCACCACGTG
AACGGATCCCTGGGCTCGGGCGACATGGACGGGTTGCCGAAGAGTTCCCCCGGCGCCGTG
GCCGGCCTGAGCAACGCCCCGGGCACCCCGCGGGACGACGGCGAGATGGCGGCCGCCGGG
ACCTTCCTGCACCCGTTCCCGAGCGAAAGCTACTCGCCAGGGATGACCATGAGCGTGGTT
TAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGC
TGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCA
ATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGG
AGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGT
AAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGC
CCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTT
CCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAA
TTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCT
TTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGA
CGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTG
GAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTG
TTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCC
CTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCT
TGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAA
GTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATG
GCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAA
GCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGAT
GATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCG
CGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATC
ATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGAC
CGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGG
GCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTC
TATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAG
CGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGG
GGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAA
GGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCG
ACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCC
TGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGC
CTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTC
GGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCG
CTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCC
ACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGA
GTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGC
TCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAAC
CACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGG
ATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTC
ACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATA
GTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAA
AATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGG
TATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGC
CATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTA
AGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTA
CTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAA
ATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGT
CCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGG
GTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGA
AAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAA
ATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGAC
GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTT
TTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTC
AT