SMARCD2 ORF clone pFN21AB5820

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AB5820

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Clone info.

Species

human

Clone Name

pFN21AB5820 Sequence (with vector) Restriction Map

Product ID

FHC30745

ORF Sequence

DNA sequence (1593 bp)
Protein sequence (531 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIBB5820

Symbol

SMARCD2

Alias : BAF60B, CRACD2, PRO2451, Rsc6p, SGD2

Description

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2

Original Clone ID

cs00599

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1593 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 531 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS45756.1 8.1e-94 100.0 SMARCD2 CCDS82188.1 9.9e-80 99.6 SMARCD2 CCDS82187.1 8.5e-79 100.0 SMARCD2 CCDS8797.2 8.8e-54 63.8 SMARCD1 CCDS5924.1 2e-45 70.4 SMARCD3 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR003121 308 380 PF02201 SWIB/MDM2 domain HMMSmart IPR019835 307 386 SM00151 SWIB domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001091896 531 601736 100.0 100.0 NP_001317369 483 601736 99.6 87.2 NP_001317368 456 601736 100.0 85.9 NP_003067 515 601735 63.8 100.0 NP_003069 470 601737 70.4 88.3 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB5820 Download

>KIBB5820  1593 bp
ATGTCGGGCCGAGGCGCGGGCGGGTTCCCGCTGCCCCCGCTAAGCCCTGGCGGCGGCGCC
GTGGCTGCGGCCCTGGGAGCGCCGCCTCCCCCCGCGGGACCCGGCATGCTGCCCGGACCG
GCGCTCCGGGGACCGGGTCCGGCAGGAGGCGTGGGGGGCCCCGGGGCCGCCGCCTTCCGC
CCCATGGGCCCCGCGGGCCCCGCGGCGCAGTACCAGCGACCTGGCATGTCACCAGGGAAC
CGGATGCCCATGGCTGGCTTGCAGGTGGGACCCCCTGCTGGCTCCCCATTTGGTGCAGCA
GCTCCGCTTCGACCTGGCATGCCACCCACCATGATGGATCCATTCCGAAAACGCCTGCTT
GTGCCCCAGGCGCAGCCTCCCATGCCTGCCCAGCGCCGGGGGTTAAAGAGGAGGAAGATG
GCAGATAAGGTTCTACCTCAGCGAATCCGGGAGCTTGTTCCAGAGTCTCAGGCGTACATG
GATCTCTTGGCTTTTGAGCGGAAGCTGGACCAGACCATTGCTCGCAAGCGGATGGAGATC
CAGGAGGCCATCAAAAAGCCTCTGACACAAAAGCGAAAGCTTCGGATCTACATTTCCAAT
ACGTTCAGTCCCAGCAAGGCGGAAGGCGATAGTGCAGGAACTGCAGGGACCCCTGGGGGA
ACCCCAGCAGGGGACAAGGTGGCTTCCTGGGAACTCCGAGTGGAAGGAAAACTGCTGGAT
GATCCTAGCAAACAGAAGAGGAAGTTTTCTTCATTCTTTAAGAGCCTCGTCATTGAGCTG
GACAAGGAGCTGTACGGGCCTGACAATCACCTGGTGGAGTGGCACCGGATGCCCACCACC
CAGGAGACAGATGGCTTCCAAGTAAAACGGCCTGGAGACCTCAACGTCAAGTGCACCCTC
CTGCTCATGCTGGATCATCAGCCTCCCCAGTACAAATTGGACCCCCGATTGGCAAGGCTG
CTGGGAGTGCACACGCAGACGAGGGCCGCCATCATGCAGGCCCTGTGGCTTTACATCAAG
CACAACCAGCTGCAGGATGGGCACGAGCGGGAGTACATCAACTGCAACCGTTACTTCCGC
CAGATCTTCAGTTGTGGCCGACTCCGTTTCTCCGAGATTCCCATGAAGCTGGCAGGGTTG
CTGCAGCATCCAGACCCCATTGTCATCAACCATGTCATTAGTGTCGACCCTAACGACCAG
AAGAAGACAGCCTGTTACGACATCGATGTGGAGGTGGACGACCCACTGAAGGCCCAAATG
AGCAATTTTCTGGCCTCTACCACCAATCAGCAGGAGATCGCCTCCCTTGATGTCAAGATC
CATGAGACCATTGAGTCCATCAACCAGCTGAAGACCCAGAGAGATTTCATGCTCAGTTTT
AGCACCGACCCCCAGGACTTCATCCAGGAATGGCTCCGTTCCCAGCGCCGAGACCTCAAG
ATCATCACTGATGTGATTGGAAATCCTGAGGAGGAGAGACGAGCTGCTTTCTACCACCAG
CCCTGGGCCCAGGAAGCAGTAGGCAGGCACATCTTTGCCAAGGTGCAGCAGCGAAGGCAG
GAACTGGAACAGGTGCTGGGAATTCGCCTGACC

ORF Protein

Cloned ORF protein sequence for pFN21AB5820 Download

>KIBB5820  531 aa
MSGRGAGGFPLPPLSPGGGAVAAALGAPPPPAGPGMLPGPALRGPGPAGGVGGPGAAAFR
PMGPAGPAAQYQRPGMSPGNRMPMAGLQVGPPAGSPFGAAAPLRPGMPPTMMDPFRKRLL
VPQAQPPMPAQRRGLKRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEI
QEAIKKPLTQKRKLRIYISNTFSPSKAEGDSAGTAGTPGGTPAGDKVASWELRVEGKLLD
DPSKQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTL
LLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFR
QIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQM
SNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTDPQDFIQEWLRSQRRDLK
IITDVIGNPEEERRAAFYHQPWAQEAVGRHIFAKVQQRRQELEQVLGIRLT

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB5820 Download

>pFN21AB5820  6298 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGTCGGGCCGAGGCGCGGGCGGGTTCCCGCTGCC
CCCGCTAAGCCCTGGCGGCGGCGCCGTGGCTGCGGCCCTGGGAGCGCCGCCTCCCCCCGC
GGGACCCGGCATGCTGCCCGGACCGGCGCTCCGGGGACCGGGTCCGGCAGGAGGCGTGGG
GGGCCCCGGGGCCGCCGCCTTCCGCCCCATGGGCCCCGCGGGCCCCGCGGCGCAGTACCA
GCGACCTGGCATGTCACCAGGGAACCGGATGCCCATGGCTGGCTTGCAGGTGGGACCCCC
TGCTGGCTCCCCATTTGGTGCAGCAGCTCCGCTTCGACCTGGCATGCCACCCACCATGAT
GGATCCATTCCGAAAACGCCTGCTTGTGCCCCAGGCGCAGCCTCCCATGCCTGCCCAGCG
CCGGGGGTTAAAGAGGAGGAAGATGGCAGATAAGGTTCTACCTCAGCGAATCCGGGAGCT
TGTTCCAGAGTCTCAGGCGTACATGGATCTCTTGGCTTTTGAGCGGAAGCTGGACCAGAC
CATTGCTCGCAAGCGGATGGAGATCCAGGAGGCCATCAAAAAGCCTCTGACACAAAAGCG
AAAGCTTCGGATCTACATTTCCAATACGTTCAGTCCCAGCAAGGCGGAAGGCGATAGTGC
AGGAACTGCAGGGACCCCTGGGGGAACCCCAGCAGGGGACAAGGTGGCTTCCTGGGAACT
CCGAGTGGAAGGAAAACTGCTGGATGATCCTAGCAAACAGAAGAGGAAGTTTTCTTCATT
CTTTAAGAGCCTCGTCATTGAGCTGGACAAGGAGCTGTACGGGCCTGACAATCACCTGGT
GGAGTGGCACCGGATGCCCACCACCCAGGAGACAGATGGCTTCCAAGTAAAACGGCCTGG
AGACCTCAACGTCAAGTGCACCCTCCTGCTCATGCTGGATCATCAGCCTCCCCAGTACAA
ATTGGACCCCCGATTGGCAAGGCTGCTGGGAGTGCACACGCAGACGAGGGCCGCCATCAT
GCAGGCCCTGTGGCTTTACATCAAGCACAACCAGCTGCAGGATGGGCACGAGCGGGAGTA
CATCAACTGCAACCGTTACTTCCGCCAGATCTTCAGTTGTGGCCGACTCCGTTTCTCCGA
GATTCCCATGAAGCTGGCAGGGTTGCTGCAGCATCCAGACCCCATTGTCATCAACCATGT
CATTAGTGTCGACCCTAACGACCAGAAGAAGACAGCCTGTTACGACATCGATGTGGAGGT
GGACGACCCACTGAAGGCCCAAATGAGCAATTTTCTGGCCTCTACCACCAATCAGCAGGA
GATCGCCTCCCTTGATGTCAAGATCCATGAGACCATTGAGTCCATCAACCAGCTGAAGAC
CCAGAGAGATTTCATGCTCAGTTTTAGCACCGACCCCCAGGACTTCATCCAGGAATGGCT
CCGTTCCCAGCGCCGAGACCTCAAGATCATCACTGATGTGATTGGAAATCCTGAGGAGGA
GAGACGAGCTGCTTTCTACCACCAGCCCTGGGCCCAGGAAGCAGTAGGCAGGCACATCTT
TGCCAAGGTGCAGCAGCGAAGGCAGGAACTGGAACAGGTGCTGGGAATTCGCCTGACCGT
TTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAG
CTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGC
AATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGAT
GAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGT
GATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAAT
TGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAA
AACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCC
CTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTG
GCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGA
ACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAA
CCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGT
GTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACG
CTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTG
GATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATG
AGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAG
CAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACA
GAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATG
AGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACC
GCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTG
AATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACG
TTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGAC
TGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGG
TTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTG
GGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACT
ATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAA
TTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATAC
GGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAA
AGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTG
ACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAA
GATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGC
TTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCAC
GCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAAC
CCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGG
TAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGT
ATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGA
CAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCT
CTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGA
TTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACG
CTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCT
TCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTG
GGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTG
TACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGT
TTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTT
TTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCC
ATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT