Location:

Init: 31140083 Term: 31133710
Direction: complement
MAP: PNG

Sequence retrieval links:

Translated sequence

Nucleotide sequence
Init: Term:

Gene Products:

copia-type polyprotein //pseudo

Results of Blast2 searches (The best-hits are tabulated.):

database (show all)	Accession	Score	Iden (%)	Posi (%)	Definition
uniref100	UniRef100_Q9C5V1	301	46.3	65.1	Gag/pol polyprotein [Arabidopsis thaliana]
LJGI	BP052632	99.0	45.0	60.0
MTGI	TC93066	123	33.6	50.9	weakly similar to GP|19920130|gb|AAM08562.1 Putative retroelement {Oryza sativa} [Oryza sativa (japonica cultivar-group)], partial (10%)
GMGI	TC204438	279	45.6	60.3	homologue to UP|Q84VH6 (Q84VH6) Gag-pol polyprotein, complete
ara_mips	At3g61330	207	34.2	51.5	copia-type polyprotein
nr	gb|AAG52949.1|	301	46.3	65.1	gag/pol polyprotein [Arabidopsis thaliana]
sprot	POLX_TOBAC	163	30.0	49.3	(P10978) Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Contains: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]