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Gene Information ( chr1 )

TM0320a.8

Location:

Init: 5965812 Term: 5960980
Direction: complement
MAP: PNG

Sequence retrieval links:

Translated sequence

Gene Products:

polyprotein, putative

Results of Blast2 searches (The best-hits are tabulated.):

database
(show all) Accession Score Iden
(%) Posi
(%) Definition

uniref100 UniRef100_Q9FZK7 836 40.7 56.2 F17L21.7 [Arabidopsis thaliana]

LJGI BI418295 223 63.2 78.9

MTGI AW689768 285 58.3 75.9 weakly similar to GP|10177485|d polyprotein {Arabidopsis thaliana}, partial (9%)

GMGI TC204438 536 31.2 48.8 homologue to UP|Q84VH6 (Q84VH6) Gag-pol polyprotein, complete

ara_mips At1g44510 841 40.4 55.0 polyprotein, putative

nr gb|AAA57005.1| 852 42.4 58.0 copia-like retrotransposon Hopscotch polyprotein [Zea mays] gi|7444442|pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch

sprot POLX_TOBAC 496 35.3 50.4 (P10978) Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Contains: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]

database (show all)	Accession	Score	Iden (%)	Posi (%)	Definition
uniref100	UniRef100_Q9FZK7	836	40.7	56.2	F17L21.7 [Arabidopsis thaliana]
LJGI	BI418295	223	63.2	78.9
MTGI	AW689768	285	58.3	75.9	weakly similar to GP\|10177485\|d polyprotein {Arabidopsis thaliana}, partial (9%)
GMGI	TC204438	536	31.2	48.8	homologue to UP\|Q84VH6 (Q84VH6) Gag-pol polyprotein, complete
ara_mips	At1g44510	841	40.4	55.0	polyprotein, putative
nr	gb\|AAA57005.1\|	852	42.4	58.0	copia-like retrotransposon Hopscotch polyprotein [Zea mays] gi\|7444442\|pir\|\|T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
sprot	POLX_TOBAC	496	35.3	50.4	(P10978) Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Contains: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]

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