BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0320a.8
(1611 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BI418295 223 2e-58
BP033820 197 3e-54
AV769206 171 1e-42
AV779281 161 7e-40
AV780009 150 2e-36
TC12255 144 1e-34
AV777202 139 5e-33
BP066094 120 2e-29
BP041457 105 7e-23
BP075943 100 2e-21
AV764934 93 3e-19
BP084332 93 3e-19
AU088980 86 5e-17
BP063694 83 3e-16
BP057233 81 1e-15
TC16929 weakly similar to UP|Q9LFY6 (Q9LFY6) T7N9.5, partial (4%) 79 4e-15
BP030995 77 2e-14
BP070393 75 6e-14
BP073434 74 2e-13
TC15664 weakly similar to UP|O81617 (O81617) F8M12.17 protein, p... 70 2e-12
>BI418295
Length = 523
Score = 223 bits (567), Expect = 2e-58
Identities = 108/171 (63%), Positives = 135/171 (78%)
Frame = +2
Query: 39 WKQQVEGVIRSHKLQKFVQDPPMIPEKFLTEEDKITENVNPLFADWEQQDSLLFTWLLST 98
W+QQVEG I+SH+L F+ DP IP++FLTEED++ NP + W +QDS++FTWLL+T
Sbjct: 14 WRQQVEGAIQSHQLHDFLVDPE-IPQRFLTEEDRVAATENPAYTTWIKQDSMVFTWLLTT 190
Query: 99 LSPAILPNVIQCVHSYQVWEEIHSFFNAKSRAQSTQLRNELKNITKGTKTASEFLQRIKT 158
LSP +LP VI C S QVW EI FF + RAQS +LR+ELKNITKG+K+ +E+L+RIKT
Sbjct: 191 LSPFVLPTVINCERSSQVWREILDFFENQCRAQSAKLRSELKNITKGSKSITEYLRRIKT 370
Query: 159 IVNTLASIGEPVTFRDHLEAIFDGLSEEYSALMTVIYNQTTYFTISEVEAM 209
IVNTL SIGEPV+FRDHLEAIFDGL E+YSAL T+I+ + TISEVEAM
Sbjct: 371 IVNTLVSIGEPVSFRDHLEAIFDGLPEDYSALSTIIFTHASSSTISEVEAM 523
>BP033820
Length = 537
Score = 197 bits (500), Expect(2) = 3e-54
Identities = 110/180 (61%), Positives = 126/180 (69%), Gaps = 8/180 (4%)
Frame = -2
Query: 529 ALLPSSFNPTASLILKKLLLVPSITKNLVSVSRFARDNNVFFSFHANHCSVHHQDTYELL 588
A LPS FNP A LIL KLLLVPSITKNLVSVSRFA+DNNV+F+FHAN C+V HQDT ELL
Sbjct: 536 ATLPSLFNPKAILILNKLLLVPSITKNLVSVSRFAKDNNVYFTFHANFCAVRHQDTSELL 357
Query: 589 LTGTVGDDGLYYFDGPLTKA-SSQPQSSSPLSS-------IQACLASKSAANKASPAIDL 640
LTG+VGDDGLYYFDGP ++A S P +S S QA LAS+ NKAS AIDL
Sbjct: 356 LTGSVGDDGLYYFDGPPSQAVSHSPVKASLFQSSLHSQPLAQAGLASQPVGNKASSAIDL 177
Query: 641 QSATVSPIVPCNNADSVNVSSTVSDLVSCNSGSGISVYDLWHSRLGHPHHDVLKQTLSLC 700
S+ V+S+VS CNS S IS+Y+LWH+R+GHPHHDVLKQ L LC
Sbjct: 176 PSSL--------------VNSSVSSSAPCNSSSNISIYELWHNRMGHPHHDVLKQ-LCLC 42
Score = 33.9 bits (76), Expect(2) = 3e-54
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -1
Query: 696 TLSLCNISVPSNKSVFSF 713
TLSLCN+ V SNKSVFSF
Sbjct: 54 TLSLCNVPVSSNKSVFSF 1
>AV769206
Length = 536
Score = 171 bits (432), Expect = 1e-42
Identities = 83/108 (76%), Positives = 90/108 (82%)
Frame = -3
Query: 913 FLRPYNSNKLSLHSKECVFIGYSINHKGYKCLDQSGRIYISKDVLFHEHRFPYPILFPTD 972
FLRPYNS KLSLHSKECVFIGYSINHKGYKCLDQSGRIYISKDVLFHEHRFPYP LFP +
Sbjct: 534 FLRPYNSTKLSLHSKECVFIGYSINHKGYKCLDQSGRIYISKDVLFHEHRFPYPSLFPDE 355
Query: 973 HSSSSSAEFYPLSTIPIISHTAPPSSPVLAASGHSSPGPQDSPQQQQP 1020
+SS+SAEF+PLSTIPI+SHT PP+ LA+SG SS G P P
Sbjct: 354 TTSSTSAEFFPLSTIPIVSHTTPPA---LASSGFSSLGSATLPSSFNP 220
Score = 32.7 bits (73), Expect = 0.46
Identities = 15/19 (78%), Positives = 16/19 (83%)
Frame = -3
Query: 525 SIGSALLPSSFNPTASLIL 543
S+GSA LPSSFNPTA L L
Sbjct: 258 SLGSATLPSSFNPTAKLTL 202
>AV779281
Length = 505
Score = 161 bits (408), Expect = 7e-40
Identities = 80/151 (52%), Positives = 110/151 (71%)
Frame = +1
Query: 11 PSSSSSSSLSQAFSHKLSIKLDDSNFYSWKQQVEGVIRSHKLQKFVQDPPMIPEKFLTEE 70
PS SSS+ + A+ L+D+NF SWKQ VEG++R+H+ Q F+ D P +P +FL++E
Sbjct: 64 PSLSSSALVHNAY-------LEDTNFLSWKQHVEGIVRTHRWQSFL-DHPDVPPRFLSDE 219
Query: 71 DKITENVNPLFADWEQQDSLLFTWLLSTLSPAILPNVIQCVHSYQVWEEIHSFFNAKSRA 130
D++ NP + WEQQDS LFTWLLS+LSP +LP V+ C S+QV E + FF A S A
Sbjct: 220 DRVNAVENPAYQLWEQQDSALFTWLLSSLSPTVLPTVVNCSQSWQVREAVLDFFKAHSFA 399
Query: 131 QSTQLRNELKNITKGTKTASEFLQRIKTIVN 161
QSTQLR+EL++I KG+KT S++L+RIK+IVN
Sbjct: 400 QSTQLRSELRSIAKGSKTCSDYLKRIKSIVN 492
>AV780009
Length = 529
Score = 150 bits (379), Expect = 2e-36
Identities = 80/176 (45%), Positives = 107/176 (60%), Gaps = 1/176 (0%)
Frame = -1
Query: 1419 KAVKRILRYLKGTLTHGILLQPCSMTRPLPLIAYCDADWGSDPDDRRSTSGSCVFLGYNL 1478
+A R+LRY+KG G+ S PL L AY D+DW PD RRS +G +FLG +L
Sbjct: 529 QAATRVLRYVKGAPAQGLFF---SADSPLKLQAYSDSDWAGCPDTRRSVTGYSIFLGTSL 359
Query: 1479 ISWTAKKQSLVARSSTEAEYRSLANTTAELLWVQSLLTELKIPFTIPT-VYCDNMSTVLL 1537
ISW KKQ+ V+RSS+EAEYR+LA T E+ W+ L LK+ +P ++CDN S + +
Sbjct: 358 ISWRTKKQTTVSRSSSEAEYRALAATVCEVQWLSYLFQFLKLNVPLPVPLFCDNQSALHI 179
Query: 1538 THNPILHTRTKHMEMDIFFVREKVQDKSLLVQHVPSEHQKADIFTKALSPTRFLLL 1593
HNP H RTKH+E+D VR K+Q + + + + HQ ADIFTK F LL
Sbjct: 178 AHNPTFHERTKHIELDCHVVRAKLQAGLIHLLPISTHHQLADIFTKPCPHLCFPLL 11
>TC12255
Length = 558
Score = 144 bits (362), Expect = 1e-34
Identities = 80/140 (57%), Positives = 93/140 (66%), Gaps = 8/140 (5%)
Frame = +1
Query: 583 DTYELLLTGTVGDDGLYYFDGPLTKA-SSQPQSSSPLSS-------IQACLASKSAANKA 634
DT ELLLTG+VGDDGLYYFDGP ++A S P +S S QA LAS+ NKA
Sbjct: 181 DTSELLLTGSVGDDGLYYFDGPPSQAVSHSPVKASLFQSSLHSQPLAQAGLASQPVGNKA 360
Query: 635 SPAIDLQSATVSPIVPCNNADSVNVSSTVSDLVSCNSGSGISVYDLWHSRLGHPHHDVLK 694
S AIDL S+ V+ S+VS CNS S IS+Y+LWH+R+GHPHHDVLK
Sbjct: 361 SSAIDLPSSLVN--------------SSVSSSAPCNSSSNISIYELWHNRMGHPHHDVLK 498
Query: 695 QTLSLCNISVPSNKSVFSFC 714
QTLSLCN+ V SNKSVFSFC
Sbjct: 499 QTLSLCNVPVSSNKSVFSFC 558
Score = 91.3 bits (225), Expect = 1e-18
Identities = 40/46 (86%), Positives = 44/46 (94%)
Frame = +3
Query: 482 VTWCPDSGATHHVTNNPGIFVDHVPSSSQEQLLVGNGQGLPIQSIG 527
V WCPDSGATHHVTNNPGIFVD+VP ++Q+QLLVGNGQGLPIQSIG
Sbjct: 45 VNWCPDSGATHHVTNNPGIFVDNVPLATQDQLLVGNGQGLPIQSIG 182
>AV777202
Length = 421
Score = 139 bits (349), Expect = 5e-33
Identities = 63/114 (55%), Positives = 84/114 (73%)
Frame = +3
Query: 20 SQAFSHKLSIKLDDSNFYSWKQQVEGVIRSHKLQKFVQDPPMIPEKFLTEEDKITENVNP 79
S + HKL +KLDDSNF SWKQ VEG++R+H+LQ F+ P IP +FL+EED++ NP
Sbjct: 81 SSSLVHKLVLKLDDSNFLSWKQHVEGIVRTHRLQNFLVHPD-IPPRFLSEEDRVNAVENP 257
Query: 80 LFADWEQQDSLLFTWLLSTLSPAILPNVIQCVHSYQVWEEIHSFFNAKSRAQST 133
+ W+QQDS LFTWLLS+LS ++LP V+ C S+Q+WE + FF A+S AQST
Sbjct: 258 AYQVWDQQDSALFTWLLSSLSSSVLPTVVNCTQSWQIWEAVLDFFQAQSLAQST 419
>BP066094
Length = 532
Score = 120 bits (300), Expect(2) = 2e-29
Identities = 60/148 (40%), Positives = 93/148 (62%), Gaps = 1/148 (0%)
Frame = +2
Query: 1180 KPITVRLILSLAISRGWPLQQLDVNNAFLNGVLEEEVYMVQPPGFE-HKDKNLVCKLQKA 1238
K +RL++S +++ L Q++V +AFLNG + EEVY+ QPPG E K+ + + KL+K+
Sbjct: 89 KTEAIRLLISFSVNHNIILHQMNVKSAFLNGYISEEVYVHQPPGXEDEKNSDHIFKLKKS 268
Query: 1239 LYGLKQAPRAWFHRLKEVLIRFGFQASKCDPSLFTYYSSQGCIYMLVYVDDIIITGASMS 1298
LYGLKQAPRAW+ RL L+ K D +LF + + +YVDDII A+ S
Sbjct: 269 LYGLKQAPRAWYERLSSFLLENEXVRGKVDTTLFCKTYKDDILIVQIYVDDIIFGSANPS 448
Query: 1299 LIQQLTAQLHSIFALKQLGQLDYFLGVQ 1326
L ++ + + + F ++ +G+L YFLG+Q
Sbjct: 449 LCKEFSEMMQAEFEMRMMGELKYFLGIQ 532
Score = 27.7 bits (60), Expect(2) = 2e-29
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3
Query: 1163 YSQVQGFDYSETFSPVVK 1180
YSQ G DY+ETF+PV +
Sbjct: 39 YSQQ*GIDYTETFAPVAR 92
>BP041457
Length = 495
Score = 105 bits (261), Expect = 7e-23
Identities = 51/126 (40%), Positives = 80/126 (63%)
Frame = +2
Query: 20 SQAFSHKLSIKLDDSNFYSWKQQVEGVIRSHKLQKFVQDPPMIPEKFLTEEDKITENVNP 79
S FS+ + KL F WKQQVE +I++H L ++ +P IP ++ ++E+ VNP
Sbjct: 92 SALFSYLIFEKLSAKKFLLWKQQVEPIIKAHHLHCYIVEPA-IPPRYSSDEEHANGVVNP 268
Query: 80 LFADWEQQDSLLFTWLLSTLSPAILPNVIQCVHSYQVWEEIHSFFNAKSRAQSTQLRNEL 139
+ WE D L +WL S LS ++ +I CV+S+Q+W +IHSFF+ ++RA+STQ+R EL
Sbjct: 269 AYPIWETHDQFLLSWLQSLLSSSVHTCMIGCVNSFQLWVKIHSFFHNQTRAKSTQIRTEL 448
Query: 140 KNITKG 145
++ G
Sbjct: 449 RSAKLG 466
>BP075943
Length = 547
Score = 100 bits (248), Expect = 2e-21
Identities = 62/177 (35%), Positives = 95/177 (53%), Gaps = 4/177 (2%)
Frame = -3
Query: 1276 SSQGCIYMLVYVDDIIITGASMSLIQQLTAQLHSIFALKQLGQLDYFLGVQVTHLSNGNL 1335
SS +L+YVDD+++ G M IQ + + LH F +K LG+ YFLG+++ ++G +
Sbjct: 542 SSGSFTALLLYVDDVLLAGNDMHEIQLVKSSLHDQFRIKDLGEAKYFLGLEIARSTSG-I 366
Query: 1336 LLNQTKYISDLLTKVNMLDAA----AISTPMQCGVKLSKNEGSALKDPTEYRSVVGALQY 1391
+LNQ KY L++ + T Q L N G+ L D YR +VG L Y
Sbjct: 365 VLNQRKYALQLISDSGHFGFQPRFYSHGTNSQT---LGTNTGTPLTDIGSYRRIVGRLLY 195
Query: 1392 ATITRPEISFAVNKVCQFMAQPHEEHWKAVKRILRYLKGTLTHGILLQPCSMTRPLP 1448
TRP+I+FAVN++ QF++ P + H + + L+YL G+ G+ S T LP
Sbjct: 194 LNTTRPDITFAVNQLSQFLSAPTDIHEQQLTGFLKYL*GSPGSGLFYPASSSTL*LP 24
>AV764934
Length = 406
Score = 93.2 bits (230), Expect = 3e-19
Identities = 66/166 (39%), Positives = 81/166 (48%)
Frame = -2
Query: 584 TYELLLTGTVGDDGLYYFDGPLTKASSQPQSSSPLSSIQACLASKSAANKASPAIDLQSA 643
T E L+ G VG DGLY F PL +Q ++S + S+
Sbjct: 372 TSEPLIHGVVGPDGLYSF---------------PLPQLQQLGYTRS----------MSSS 268
Query: 644 TVSPIVPCNNADSVNVSSTVSDLVSCNSGSGISVYDLWHSRLGHPHHDVLKQTLSLCNIS 703
VS P S+VS V+ ++ WHSRLGHPH D LK+ LS CN+S
Sbjct: 267 PVSGRHP----------SSVSAFVTLST---------WHSRLGHPHLDNLKRVLSSCNVS 145
Query: 704 VPSNKSVFSFCKACCLSKLHRLPSSSSNTVYNTPFELVFADLWGPA 749
S K F ACCL K HRLPS S T Y PFEL+++DLWGPA
Sbjct: 144 Y-SPKDTVEFRTACCLGKAHRLPSQMSTTTY-LPFELIYSDLWGPA 13
>BP084332
Length = 368
Score = 93.2 bits (230), Expect = 3e-19
Identities = 49/115 (42%), Positives = 74/115 (63%), Gaps = 1/115 (0%)
Frame = +2
Query: 1477 NLISWTAK-KQSLVARSSTEAEYRSLANTTAELLWVQSLLTELKIPFTIPTVYCDNMSTV 1535
N+ W A QS +A S+ EAEY S A + ++LW++ L + +I + +YCDN + +
Sbjct: 2 NVNFWEAT*GQSTIALSTAEAEYISAAICSTQMLWMKHQLEDYQILESNIPIYCDNTAAI 181
Query: 1536 LLTHNPILHTRTKHMEMDIFFVREKVQDKSLLVQHVPSEHQKADIFTKALSPTRF 1590
L+ NPILH+R KH+E+ F+R+ VQ LL++ V ++HQ ADIFTK L+ RF
Sbjct: 182 SLSKNPILHSRAKHIEVKYHFIRDYVQKGVLLLKFVDTDHQWADIFTKPLAEDRF 346
>AU088980
Length = 360
Score = 85.9 bits (211), Expect = 5e-17
Identities = 42/109 (38%), Positives = 58/109 (52%)
Frame = +2
Query: 837 NGSVERKHRHIVETGLALLSHASMPLQFWDHAFLAATYLINRMSTTTLQGASPYFKLYGQ 896
N VERKHRHI+ AL+ H+ +P W A A YLIN + + L+G PY L
Sbjct: 2 NSIVERKHRHILNVTRALMFHSYLPKNLWTFAVKHAAYLINXLPSPLLKGQCPYQFLNND 181
Query: 897 YPDFKSLKVFGSACFPFLRPYNSNKLSLHSKECVFIGYSINHKGYKCLD 945
P LKVFG+ C+ +N KL +++CVF+G+ GY +D
Sbjct: 182 SPTLLDLKVFGTLCYSSTLTHNXQKLDPRARKCVFLGFKTGTXGYIVMD 328
>BP063694
Length = 511
Score = 83.2 bits (204), Expect = 3e-16
Identities = 48/145 (33%), Positives = 76/145 (52%)
Frame = -2
Query: 653 NADSVNVSSTVSDLVSCNSGSGISVYDLWHSRLGHPHHDVLKQTLSLCNISVPSNKSVFS 712
N DS + +T S L + ++LWHSRLGH + D++KQ + V S
Sbjct: 420 NQDSQALLTTSSPLPRAS-------FELWHSRLGHVNFDIIKQLHKHGCLDVSSILPKPI 262
Query: 713 FCKACCLSKLHRLPSSSSNTVYNTPFELVFADLWGPASLESSCGFLYFLTCVDACTKYTW 772
C +C ++K RL +N + +L+ DL GP+ + S GF YF+ VD +++TW
Sbjct: 261 CCTSCQMAKSKRLVFHDNNKRASAVLDLIHCDLRGPSPVASIDGFSYFVIFVDDFSRFTW 82
Query: 773 VFPLKKKSDTCATFINFQAMVELQF 797
+PLK+KSD + F+ +E +F
Sbjct: 81 FYPLKRKSDFSDVLLRFKVFMENRF 7
>BP057233
Length = 473
Score = 80.9 bits (198), Expect = 1e-15
Identities = 38/85 (44%), Positives = 56/85 (65%)
Frame = -2
Query: 1525 PTVYCDNMSTVLLTHNPILHTRTKHMEMDIFFVREKVQDKSLLVQHVPSEHQKADIFTKA 1584
P ++CDN+S L NP+LH R+KH+E+D+ ++R++V ++V +VP+ Q AD TK
Sbjct: 451 PILWCDNLSAKALASNPVLHARSKHIEIDVHYIRDQVLQNEVVVAYVPTTDQIADCLTKP 272
Query: 1585 LSPTRFLLLKDKLNVVDKQVLLSPP 1609
LS TRF L+DKL V+ SPP
Sbjct: 271 LSHTRFSQLRDKLGVIH-----SPP 212
>TC16929 weakly similar to UP|Q9LFY6 (Q9LFY6) T7N9.5, partial (4%)
Length = 553
Score = 79.3 bits (194), Expect = 4e-15
Identities = 40/93 (43%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Frame = +1
Query: 1510 WVQSLLTELKIPFTIPT-VYCDNMSTVLLTHNPILHTRTKHMEMDIFFVREKVQDKSLLV 1568
W+ LL +LK+PF P VYCDN S + NP+ H RTKH+E+D VRE++Q + +
Sbjct: 4 WLTYLLQDLKVPFEQPALVYCDNNSARHIAANPVFHERTKHIEIDCHIVRERIQKGLIHL 183
Query: 1569 QHVPSEHQKADIFTKALSPTRFLLLKDKLNVVD 1601
+ S ADI+TKALSP F + KL +++
Sbjct: 184 LPISSSEPLADIYTKALSPQNFHQICAKLGLIN 282
>BP030995
Length = 458
Score = 77.0 bits (188), Expect = 2e-14
Identities = 57/165 (34%), Positives = 77/165 (46%), Gaps = 4/165 (2%)
Frame = -3
Query: 541 LILKKLLLVPSITKNLVSVSRFARDNNVFFSFHANHCSVHHQDTYELLLTGTVGDDGLYY 600
L+L LL VP + KNL SVS F + NNVFF FH++ C V Q+T E LL GT+ + GL
Sbjct: 426 LVLNNLLHVPGVCKNLSSVSXFCKQNNVFFEFHSDSCLVKSQETEETLLQGTLRN-GLCA 250
Query: 601 FDGPLTKASSQPQSSSPLSSIQACLASKSAANKASPAIDLQSATVSPIVPCNNADSVNVS 660
FD L K + S+ L++ + + +SPA SA + N ++
Sbjct: 249 FDNLLHKVNLHSAST---------LSNSALLSSSSPA----SALSVSVFSSNKCAQADID 109
Query: 661 STVSDLVSCNSGSGISVYDLWHSRLGHPHH----DVLKQTLSLCN 701
S LWHSRLGH VLK + LC+
Sbjct: 108 SR-----------------LWHSRLGHASQKIVSHVLKHVILLCH 25
>BP070393
Length = 359
Score = 75.5 bits (184), Expect = 6e-14
Identities = 48/125 (38%), Positives = 66/125 (52%)
Frame = -3
Query: 582 QDTYELLLTGTVGDDGLYYFDGPLTKASSQPQSSSPLSSIQACLASKSAANKASPAIDLQ 641
++T ++LL G+VG DGLY FD + S S S LS+ ++P++
Sbjct: 291 KETSKVLLRGSVGSDGLYTFDDVNAASVSSSCSKSDLST-------------STPSV--- 160
Query: 642 SATVSPIVPCNNADSVNVSSTVSDLVSCNSGSGISVYDLWHSRLGHPHHDVLKQTLSLCN 701
+S + P S N+SS S G S YDLWH RLGHPHH+VLK TL LCN
Sbjct: 159 ---LSTVYP-GTGKSQNMSSV--------SSLGNSSYDLWHCRLGHPHHEVLKTTLQLCN 16
Query: 702 ISVPS 706
+ +P+
Sbjct: 15 VPLPN 1
>BP073434
Length = 490
Score = 73.6 bits (179), Expect = 2e-13
Identities = 51/149 (34%), Positives = 65/149 (43%)
Frame = -1
Query: 587 LLLTGTVGDDGLYYFDGPLTKASSQPQSSSPLSSIQACLASKSAANKASPAIDLQSATVS 646
+LL G VG DGLY F G L SS +S S
Sbjct: 313 VLLLGHVGADGLYSFPGLLASLSSVDRSPS------------------------------ 224
Query: 647 PIVPCNNADSVNVSSTVSDLVSCNSGSGISVYDLWHSRLGHPHHDVLKQTLSLCNISVPS 706
D VN +T + + + +WHSRLGHPH D L+ L CNI + S
Sbjct: 223 -------FDIVNTITTTTT----------NKFLIWHSRLGHPHQDALQAVLQSCNIHL-S 98
Query: 707 NKSVFSFCKACCLSKLHRLPSSSSNTVYN 735
++ + FC ACCL K H LPSS S +VY+
Sbjct: 97 SRDMTDFCYACCLGKSHILPSSLSTSVYS 11
Score = 45.1 bits (105), Expect = 9e-05
Identities = 23/54 (42%), Positives = 31/54 (56%)
Frame = -2
Query: 483 TWCPDSGATHHVTNNPGIFVDHVPSSSQEQLLVGNGQGLPIQSIGSALLPSSFN 536
+W PDSGA+HHVT + P + + VGNGQGL + S G + P SF+
Sbjct: 459 SWYPDSGASHHVTPHGNNIQYPDPFEGPDHIFVGNGQGLSVASSGFS--PQSFS 304
>TC15664 weakly similar to UP|O81617 (O81617) F8M12.17 protein, partial (4%)
Length = 670
Score = 70.5 bits (171), Expect = 2e-12
Identities = 38/96 (39%), Positives = 56/96 (57%), Gaps = 1/96 (1%)
Frame = +1
Query: 1507 ELLWVQSLLTELKIPFTIPTV-YCDNMSTVLLTHNPILHTRTKHMEMDIFFVREKVQDKS 1565
EL W+ +L +L++PF P++ YCD+ S + N + H RTKH+++D VREK+Q K
Sbjct: 4 EL*WLTYILQDLRVPFISPSLLYCDSQSARHIATNAVFHERTKHLDIDCHVVREKLQAKL 183
Query: 1566 LLVQHVPSEHQKADIFTKALSPTRFLLLKDKLNVVD 1601
+ + S Q ADI TK L F L KL V++
Sbjct: 184 FHLLPISSVDQTADILTKPLESGPFSHLVSKLGVLN 291
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.317 0.131 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,858,958
Number of Sequences: 28460
Number of extensions: 594995
Number of successful extensions: 11005
Number of sequences better than 10.0: 626
Number of HSP's better than 10.0 without gapping: 6091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9434
length of query: 1611
length of database: 4,897,600
effective HSP length: 103
effective length of query: 1508
effective length of database: 1,966,220
effective search space: 2965059760
effective search space used: 2965059760
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Lotus: description of TM0320a.8