Lotus
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0320a.8
         (1611 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

POLX_TOBAC (P10978) Retrovirus-related Pol polyprotein from tran...   496  e-139
COPI_DROME (P04146) Copia protein (Gag-int-pol protein) [Contain...   338  9e-92
M810_ARATH (P92519) Hypothetical mitochondrial protein AtMg00810...   219  4e-56
YCH4_YEAST (P25600) Transposon Ty5-1 34.5 kDa hypothetical protein    173  4e-42
YJL3_YEAST (P47024) Transposon Ty4 207.7 kDa hypothetical protein     132  6e-30
YMD9_YEAST (Q03434) Transposon Ty1 protein B                          120  4e-26
YMU0_YEAST (Q04670) Transposon Ty1 protein B                          118  1e-25
YME4_YEAST (Q04711) Transposon Ty1 protein B                          118  1e-25
YJZ9_YEAST (P47100) Transposon Ty1 protein B                          117  3e-25
M820_ARATH (P92520) Hypothetical mitochondrial protein AtMg00820...   116  4e-25
YJZ7_YEAST (P47098) Transposon Ty1 protein B                          116  6e-25
YCB9_YEAST (P25384) Transposon Ty2 protein B (Ty1-17 protein B)       115  7e-25
YMT5_YEAST (Q04214) Transposon Ty1 protein B                          114  3e-24
M240_ARATH (P93290) Hypothetical mitochondrial protein AtMg00240...    74  4e-12
TNK1_HUMAN (O95271) Tankyrase 1 (EC 2.4.2.30) (TANK1) (Tankyrase...    54  3e-06
POL_FOAMV (P14350) Pol polyprotein [Contains: Reverse transcript...    50  7e-05
NUP1_RAT (P70581) Nucleoporin p58/p45 (Nucleoporin-like protein 1)     49  9e-05
NUP1_MOUSE (Q8R332) Nucleoporin p58/p45 (Nucleoporin-like protei...    49  9e-05
HORN_MOUSE (Q8VHD8) Hornerin                                           49  9e-05
OSA_DROME (Q8IN94) Trithorax group protein OSA (Eyelid protein)        49  1e-04

>POLX_TOBAC (P10978) Retrovirus-related Pol polyprotein from
            transposon TNT 1-94 [Contains: Protease (EC 3.4.23.-);
            Reverse transcriptase (EC 2.7.7.49); Endonuclease]
          Length = 1328

 Score =  496 bits (1278), Expect = e-139
 Identities = 330/936 (35%), Positives = 472/936 (50%), Gaps = 56/936 (5%)

Query: 679  DLWHSRLGHPHHDVLKQTLSLCNISVPSNKSVFSFCKACCLSKLHRLPSSSSNTVYNTPF 738
            DLWH R+GH     L+       IS     +V   C  C   K HR+   +S+       
Sbjct: 423  DLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKP-CDYCLFGKQHRVSFQTSSERKLNIL 481

Query: 739  ELVFADLWGPASLESSCGFLYFLTCVDACTKYTWVFPLKKKSDTCATFINFQAMVELQFG 798
            +LV++D+ GP  +ES  G  YF+T +D  ++  WV+ LK K      F  F A+VE + G
Sbjct: 482  DLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETG 541

Query: 799  HKLKSVQTDGGGEF--KPLTSHFQKLGIIHRLTCPHTHHQNGSVERKHRHIVETGLALLS 856
             KLK +++D GGE+  +    +    GI H  T P T   NG  ER +R IVE   ++L 
Sbjct: 542  RKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLR 601

Query: 857  HASMPLQFWDHAFLAATYLINRMSTTTLQGASPYFKLYGQYPDFKSLKVFGSACFPFLRP 916
             A +P  FW  A   A YLINR  +  L    P      +   +  LKVFG   F  +  
Sbjct: 602  MAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPK 661

Query: 917  YNSNKLSLHSKECVFIGYSINHKGYKCLDQ-SGRIYISKDVLFHEHRFPYPILFPTDHSS 975
                KL   S  C+FIGY     GY+  D    ++  S+DV+F E      +    D S 
Sbjct: 662  EQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESE----VRTAADMSE 717

Query: 976  SSSAEFYP-LSTIPIISHTAPPSSPVLAASGHSSPGPQDSPQQQQPPSATLSADDPSTST 1034
                   P   TIP  S+  P S+         S   + S Q +QP       +      
Sbjct: 718  KVKNGIIPNFVTIPSTSNN-PTSA--------ESTTDEVSEQGEQPGEVIEQGEQLDEGV 768

Query: 1035 PAVVSPPVPSSSAQSADTSASVVAAAPPVIVNTHPMQTRAKNGIVKPRLQPTLLLTHLEP 1094
              V  P       Q             P+  +  P     +     P  +  L+    EP
Sbjct: 769  EEVEHPTQGEEQHQ-------------PLRRSERPRVESRR----YPSTEYVLISDDREP 811

Query: 1095 TSVKQAM---KDAKWYKAMQEEYTALMNNGTWTLVPLPANRTPVGCKWIYRIKENPDGSI 1151
             S+K+ +   +  +  KAMQEE  +L  NGT+ LV LP  + P+ CKW++++K++ D  +
Sbjct: 812  ESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKL 871

Query: 1152 NKYKARLVAKGYSQVQGFDYSETFSPVVKPITVRLILSLAISRGWPLQQLDVNNAFLNGV 1211
             +YKARLV KG+ Q +G D+ E FSPVVK  ++R ILSLA S    ++QLDV  AFL+G 
Sbjct: 872  VRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGD 931

Query: 1212 LEEEVYMVQPPGFE-HKDKNLVCKLQKALYGLKQAPRAWFHRLKEVLIRFGFQASKCDPS 1270
            LEEE+YM QP GFE    K++VCKL K+LYGLKQAPR W+ +    +    +  +  DP 
Sbjct: 932  LEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPC 991

Query: 1271 L-FTYYSSQGCIYMLVYVDDIIITGASMSLIQQLTAQLHSIFALKQLGQLDYFLGVQ-VT 1328
            + F  +S    I +L+YVDD++I G    LI +L   L   F +K LG     LG++ V 
Sbjct: 992  VYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVR 1051

Query: 1329 HLSNGNLLLNQTKYISDLLTKVNMLDAAAISTPMQCGVKLSK--------NEGSALKDPT 1380
              ++  L L+Q KYI  +L + NM +A  +STP+   +KLSK         +G+  K P 
Sbjct: 1052 ERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVP- 1110

Query: 1381 EYRSVVGALQYATI-TRPEISFAVNKVCQFMAQPHEEHWKAVKRILRYLKGTLTHGILLQ 1439
             Y S VG+L YA + TRP+I+ AV  V +F+  P +EHW+AVK ILRYL+GT    +   
Sbjct: 1111 -YSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCL--- 1166

Query: 1440 PCSMTRPLPLIAYCDADWGSDPDDRRSTSGSCVFLGYNLISWTAKKQSLVARSSTEAEYR 1499
             C       L  Y DAD   D D+R+S++G         ISW +K Q  VA S+TEAEY 
Sbjct: 1167 -CFGGSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYI 1225

Query: 1500 SLANTTAELLWVQSLLTELKIPFTIPTVYCDNMSTVLLTHNPILHTRTKHMEMDIFFVRE 1559
            +   T  E++W++  L EL +      VYCD+ S + L+ N + H RTKH+++   ++RE
Sbjct: 1226 AATETGKEMIWLKRFLQELGLHQKEYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIRE 1285

Query: 1560 KVQDKSLLVQHVPSEHQKADIFTKALSPTRFLLLKD 1595
             V D+SL V  + +    AD+ TK +   +F L K+
Sbjct: 1286 MVDDESLKVLKISTNENPADMLTKVVPRNKFELCKE 1321



 Score = 47.4 bits (111), Expect = 3e-04
 Identities = 39/193 (20%), Positives = 81/193 (41%), Gaps = 20/193 (10%)

Query: 33  DSNFYSWKQQVEGVIRSHKLQKFVQDPPMIPEKFLTEEDKITENVNPLFADWEQQDSLLF 92
           D+ F +W++++  ++    L K +      P+    E             DW   D    
Sbjct: 14  DNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAE-------------DWADLDERAA 60

Query: 93  TWLLSTLSPAILPNVIQCVHSYQVWEEIHSFFNAKSRAQSTQLRNEL--KNITKGTKTAS 150
           + +   LS  ++ N+I    +  +W  + S + +K+      L+ +L   ++++GT   S
Sbjct: 61  SAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLS 120

Query: 151 EFLQRIKTIVNTLASIGEPVTFRDHLEAIFDGLSEEYSALMTVIYNQTTYFTISEVEAMV 210
             L     ++  LA++G  +   D    + + L   Y  L T I +  T   + +V + +
Sbjct: 121 H-LNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIELKDVTSAL 179

Query: 211 ISHEARFDRMRKK 223
           + +E    +MRKK
Sbjct: 180 LLNE----KMRKK 188



 Score = 36.6 bits (83), Expect = 0.57
 Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 6/100 (6%)

Query: 477 HHSSPVT-WCPDSGATHHVTNNPGIFVDHVPSSSQEQLLVGNGQGLPIQSIGSALLPSSF 535
           H S P + W  D+ A+HH T    +F  +V +     + +GN     I  IG   + +  
Sbjct: 286 HLSGPESEWVVDTAASHHATPVRDLFCRYV-AGDFGTVKMGNTSYSKIAGIGDICIKT-- 342

Query: 536 NPTASLILKKLLLVPSITKNLVSVSRFARDNNVFFSFHAN 575
           N   +L+LK +  VP +  NL  +S  A D + + S+ AN
Sbjct: 343 NVGCTLVLKDVRHVPDLRMNL--ISGIALDRDGYESYFAN 380


>COPI_DROME (P04146) Copia protein (Gag-int-pol protein) [Contains:
            Copia VLP protein; Copia protease (EC 3.4.23.-)]
          Length = 1409

 Score =  338 bits (866), Expect = 9e-92
 Identities = 186/505 (36%), Positives = 291/505 (56%), Gaps = 15/505 (2%)

Query: 1104 AKWYKAMQEEYTALMNNGTWTLVPLPANRTPVGCKWIYRIKENPDGSINKYKARLVAKGY 1163
            + W +A+  E  A   N TWT+   P N+  V  +W++ +K N  G+  +YKARLVA+G+
Sbjct: 904  SSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGF 963

Query: 1164 SQVQGFDYSETFSPVVKPITVRLILSLAISRGWPLQQLDVNNAFLNGVLEEEVYMVQPPG 1223
            +Q    DY ETF+PV +  + R ILSL I     + Q+DV  AFLNG L+EE+YM  P G
Sbjct: 964  TQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQG 1023

Query: 1224 FEHKDKNLVCKLQKALYGLKQAPRAWFHRLKEVLIRFGFQASKCDPSLFTYYSS--QGCI 1281
                  N VCKL KA+YGLKQA R WF   ++ L    F  S  D  ++          I
Sbjct: 1024 ISCNSDN-VCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENI 1082

Query: 1282 YMLVYVDDIIITGASMSLIQQLTAQLHSIFALKQLGQLDYFLGVQVTHLSNGNLLLNQTK 1341
            Y+L+YVDD++I    M+ +      L   F +  L ++ +F+G+++  +    + L+Q+ 
Sbjct: 1083 YVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRI-EMQEDKIYLSQSA 1141

Query: 1342 YISDLLTKVNMLDAAAISTPMQCGVK---LSKNEGSALKDPTEYRSVVGALQYATI-TRP 1397
            Y+  +L+K NM +  A+STP+   +    L+ +E       T  RS++G L Y  + TRP
Sbjct: 1142 YVKKILSKFNMENCNAVSTPLPSKINYELLNSDEDC----NTPCRSLIGCLMYIMLCTRP 1197

Query: 1398 EISFAVNKVCQFMAQPHEEHWKAVKRILRYLKGTLTHGILLQPCSMTRPLPLIAYCDADW 1457
            +++ AVN + ++ ++ + E W+ +KR+LRYLKGT+   ++ +  ++     +I Y D+DW
Sbjct: 1198 DLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKK-NLAFENKIIGYVDSDW 1256

Query: 1458 GSDPDDRRSTSGSCV-FLGYNLISWTAKKQSLVARSSTEAEYRSLANTTAELLWVQSLLT 1516
                 DR+ST+G       +NLI W  K+Q+ VA SSTEAEY +L     E LW++ LLT
Sbjct: 1257 AGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLT 1316

Query: 1517 ELKIPFTIP-TVYCDNMSTVLLTHNPILHTRTKHMEMDIFFVREKVQDKSLLVQHVPSEH 1575
             + I    P  +Y DN   + + +NP  H R KH+++   F RE+VQ+  + ++++P+E+
Sbjct: 1317 SINIKLENPIKIYEDNQGCISIANNPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPTEN 1376

Query: 1576 QKADIFTKALSPTRFLLLKDKLNVV 1600
            Q ADIFTK L   RF+ L+DKL ++
Sbjct: 1377 QLADIFTKPLPAARFVELRDKLGLL 1401



 Score =  117 bits (292), Expect = 3e-25
 Identities = 91/297 (30%), Positives = 138/297 (45%), Gaps = 20/297 (6%)

Query: 678 YDLWHSRLGHPHHDVLKQTLSLCNISVPSNKSVFS-------FCKACCLSKLHRLPSSS- 729
           + LWH R GH     L   L +   ++ S++S+ +        C+ C   K  RLP    
Sbjct: 415 FRLWHERFGHISDGKL---LEIKRKNMFSDQSLLNNLELSCEICEPCLNGKQARLPFKQL 471

Query: 730 -SNTVYNTPFELVFADLWGPASLESSCGFLYFLTCVDACTKYTWVFPLKKKSDTCATFIN 788
              T    P  +V +D+ GP +  +     YF+  VD  T Y   + +K KSD  + F +
Sbjct: 472 KDKTHIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQD 531

Query: 789 FQAMVELQFGHKLKSVQTDGGGEF--KPLTSHFQKLGIIHRLTCPHTHHQNGSVERKHRH 846
           F A  E  F  K+  +  D G E+    +     K GI + LT PHT   NG  ER  R 
Sbjct: 532 FVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRT 591

Query: 847 IVETGLALLSHASMPLQFWDHAFLAATYLINRMSTTTLQGAS--PYFKLYGQYPDFKSLK 904
           I E    ++S A +   FW  A L ATYLINR+ +  L  +S  PY   + + P  K L+
Sbjct: 592 ITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPYLKHLR 651

Query: 905 VFGSACFPFLRPYNSNKLSLHSKECVFIGYSINHKGYKCLDQ-SGRIYISKDVLFHE 960
           VFG+  +  ++     K    S + +F+GY  N  G+K  D  + +  +++DV+  E
Sbjct: 652 VFGATVYVHIK-NKQGKFDDKSFKSIFVGYEPN--GFKLWDAVNEKFIVARDVVVDE 705


>M810_ARATH (P92519) Hypothetical mitochondrial protein AtMg00810
            (ORF240b)
          Length = 240

 Score =  219 bits (559), Expect = 4e-56
 Identities = 116/232 (50%), Positives = 161/232 (69%), Gaps = 9/232 (3%)

Query: 1281 IYMLVYVDDIIITGASMSLIQQLTAQLHSIFALKQLGQLDYFLGVQV-THLSNGNLLLNQ 1339
            +Y+L+YVDDI++TG+S +L+  L  QL S F++K LG + YFLG+Q+ TH S   L L+Q
Sbjct: 1    MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQ 58

Query: 1340 TKYISDLLTKVNMLDAAAISTPMQCGVKLSKNEGSA-LKDPTEYRSVVGALQYATITRPE 1398
            TKY   +L    MLD   +STP+   +KL+ +  +A   DP+++RS+VGALQY T+TRP+
Sbjct: 59   TKYAEQILNNAGMLDCKPMSTPLP--LKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPD 116

Query: 1399 ISFAVNKVCQFMAQPHEEHWKAVKRILRYLKGTLTHGILLQPCSMTRPLPLIAYCDADWG 1458
            IS+AVN VCQ M +P    +  +KR+LRY+KGT+ HG+ +   S    L + A+CD+DW 
Sbjct: 117  ISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSK---LNVQAFCDSDWA 173

Query: 1459 SDPDDRRSTSGSCVFLGYNLISWTAKKQSLVARSSTEAEYRSLANTTAELLW 1510
                 RRST+G C FLG N+ISW+AK+Q  V+RSSTE EYR+LA T AEL W
Sbjct: 174  GCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225


>YCH4_YEAST (P25600) Transposon Ty5-1 34.5 kDa hypothetical protein
          Length = 308

 Score =  173 bits (438), Expect = 4e-42
 Identities = 100/311 (32%), Positives = 172/311 (55%), Gaps = 6/311 (1%)

Query: 1201 LDVNNAFLNGVLEEEVYMVQPPGF-EHKDKNLVCKLQKALYGLKQAPRAWFHRLKEVLIR 1259
            +DV+ AFLN  ++E +Y+ QPPGF   ++ + V +L   +YGLKQAP  W   +   L +
Sbjct: 1    MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60

Query: 1260 FGFQASKCDPSLFTYYSSQGCIYMLVYVDDIIITGASMSLIQQLTAQLHSIFALKQLGQL 1319
             GF   + +  L+   +S G IY+ VYVDD+++   S  +  ++  +L  ++++K LG++
Sbjct: 61   IGFCRHEGEHGLYFRSTSDGPIYIGVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120

Query: 1320 DYFLGVQVTHLSNGNLLLNQTKYISDLLTKVNMLDAAAISTPMQCGVKLSKNEGSALKDP 1379
            D FLG+ +   +NG++ L+   YI+   ++  +       TP+     L +     LKD 
Sbjct: 121  DKFLGLNIHQSTNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHLKDI 180

Query: 1380 TEYRSVVGALQYATIT-RPEISFAVNKVCQFMAQPHEEHWKAVKRILRYLKGTLTHGILL 1438
            T Y+S+VG L +   T RP+IS+ V+ + +F+ +P   H ++ +R+LRYL  T +  +  
Sbjct: 181  TPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTTRSMCLKY 240

Query: 1439 QPCSMTRPLPLIAYCDADWGSDPDDRRSTSGSCVFLGYNLISWTAKK-QSLVARSSTEAE 1497
            +  S    + L  YCDA  G+  D   ST G    L    ++W++KK + ++   STEAE
Sbjct: 241  RSGSQ---VALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPSTEAE 297

Query: 1498 YRSLANTTAEL 1508
            Y + + T  E+
Sbjct: 298  YITASETVMEI 308


>YJL3_YEAST (P47024) Transposon Ty4 207.7 kDa hypothetical protein
          Length = 1803

 Score =  132 bits (333), Expect = 6e-30
 Identities = 127/471 (26%), Positives = 217/471 (45%), Gaps = 34/471 (7%)

Query: 1154 YKARLVAKGYSQVQGFDYSETFSPVVKPITVRLILSLAISRGWPLQQLDVNNAFLNGVLE 1213
            YKAR+V +G +Q     YS   +  +    +++ L +A +R   ++ LD+N+AFL   LE
Sbjct: 1337 YKARIVCRGDTQSPD-TYSVITTESLNHNHIKIFLMIANNRNMFMKTLDINHAFLYAKLE 1395

Query: 1214 EEVYMVQPPGFEHKDKNLVCKLQKALYGLKQAPRAWFHRLKEVLIRFGFQASKCDPSLFT 1273
            EE+Y+  P      D+  V KL KALYGLKQ+P+ W   L++ L   G + +   P L  
Sbjct: 1396 EEIYIPHP-----HDRRCVVKLNKALYGLKQSPKEWNDHLRQYLNGIGLKDNSYTPGL-- 1448

Query: 1274 YYSSQGCIYMLVYVDDIIITGASMSLIQQLTAQLHSIFALKQLGQL------DYFLGVQV 1327
            Y +    + + VYVDD +I  ++   + +   +L S F LK  G L         LG+ +
Sbjct: 1449 YQTEDKNLMIAVYVDDCVIAASNEQRLDEFINKLKSNFELKITGTLIDDVLDTDILGMDL 1508

Query: 1328 THLSN-GNLLLNQTKYISDLLTKVN--MLDAAAISTPMQCGVKLSKNEGSALKDPTEYR- 1383
             +    G + L    +I+ +  K N  +      S P     K+   +        E+R 
Sbjct: 1509 VYNKRLGTIDLTLKSFINRMDKKYNEELKKIRKSSIPHMSTYKIDPKKDVLQMSEEEFRQ 1568

Query: 1384 ------SVVGALQYAT-ITRPEISFAVNKVCQFMAQPHEEHWKAVKRILRYLKGTLTHGI 1436
                   ++G L Y     R +I FAV KV + +  PHE  +  + +I++YL      GI
Sbjct: 1569 GVLKLQQLLGELNYVRHKCRYDIEFAVKKVARLVNYPHERVFYMIYKIIQYLVRYKDIGI 1628

Query: 1437 LL-QPCSMTRPLPLIAYCDADWGSDPDDRRSTSGSCVFLGYNLISWTAKKQSLVARSSTE 1495
               + C+  +   +IA  DA  GS+  D +S  G  ++ G N+ +  + K +    SSTE
Sbjct: 1629 HYDRDCNKDK--KVIAITDASVGSE-YDAQSRIGVILWYGMNIFNVYSNKSTNRCVSSTE 1685

Query: 1496 AEYRSLANTTAELLWVQSLLTELKIPFTIPTV-YCDNMSTVLLTHNPILHTRTKHMEMDI 1554
            AE  ++    A+   ++  L EL        V   D+   +   +      + K   +  
Sbjct: 1686 AELHAIYEGYADSETLKVTLKELGEGDNNDIVMITDSKPAIQGLNRSYQQPKEKFTWIKT 1745

Query: 1555 FFVREKVQDKSLLVQHVPSEHQKADIFTKALSPTRF----LLLKDKLNVVD 1601
              ++EK+++KS+ +  +  +   AD+ TK +S + F     +LK+K+   D
Sbjct: 1746 EIIKEKIKEKSIKLLKITGKGNIADLLTKPVSASDFKRFIQVLKNKITSQD 1796



 Score = 71.2 bits (173), Expect = 2e-11
 Identities = 59/212 (27%), Positives = 97/212 (44%), Gaps = 21/212 (9%)

Query: 682 HSRLGHPHHDVLKQTL-------SLCNISVPSNKSVFSFCKACCLSKL----HRLPSSSS 730
           H R+GH     ++ ++       SL  I  P+      +C+ C +SK     H   S ++
Sbjct: 562 HKRMGHTGIQQIENSIKHNHYEESLDLIKEPNE----FWCQTCKISKATKRNHYTGSMNN 617

Query: 731 NTVYNTPFELVFADLWGPASLESSCGFLYFLTCVDACTKYTWVFP-LKKKSDTCATFI-- 787
           ++  + P      D++GP S  ++    Y L  VD  T+Y        K ++T    +  
Sbjct: 618 HSTDHEPGSSWCMDIFGPVSSSNADTKRYMLIMVDNNTRYCMTSTHFNKNAETILAQVRK 677

Query: 788 NFQAMVELQFGHKLKSVQTDGGGEFK--PLTSHFQKLGIIHRLTCPHTHHQNGSVERKHR 845
           N Q  VE QF  K++ + +D G EF    +  +F   GI H LT    H  NG  ER  R
Sbjct: 678 NIQ-YVETQFDRKVREINSDRGTEFTNDQIEEYFISKGIHHILTSTQDHAANGRAERYIR 736

Query: 846 HIVETGLALLSHASMPLQFWDHAFLAATYLIN 877
            I+     LL  +++ ++FW++A  +AT + N
Sbjct: 737 TIITDATTLLRQSNLRVKFWEYAVTSATNIRN 768


>YMD9_YEAST (Q03434) Transposon Ty1 protein B
          Length = 1328

 Score =  120 bits (300), Expect = 4e-26
 Identities = 150/685 (21%), Positives = 283/685 (40%), Gaps = 72/685 (10%)

Query: 961  HRFPYPILFPTDHSSSSSAEFYPLSTIPIISHTAPPSSPVLAASGHSSPGPQDSPQQQQP 1020
            HR P     P +++SS +    P+ T   +S      S +            D P    P
Sbjct: 664  HRSPSIDASPPENNSSHN--IVPIKTPTTVSEQNTEESIIA-----------DLPLPDLP 710

Query: 1021 PSATLSADDPSTSTPAVVSPPVPSSSAQSADTSA---------SVVAAAPPVIVNTHPMQ 1071
            P +     DP    P + S    SS     D++A         S+      + V+     
Sbjct: 711  PESPTEFPDPFKELPPINSHQTNSSLGGIGDSNAYTTINSKKRSLEDNETEIKVSRDTWN 770

Query: 1072 TRAKNGIVKPRLQPTLLLT-------HLEP-----------TSVKQAMKDAKWYKAMQEE 1113
            T+    +  PR +  + L         ++P           T  K   +  K+ +A  +E
Sbjct: 771  TKNMRSLEPPRSKKRIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIKEKEKYIEAYHKE 830

Query: 1114 YTALMNNGTWTLVPLPANRTPVGCKWI----YRIKENPDGSINKYKARLVAKGYSQVQGF 1169
               L+   TW       +R  +  K +    +   +  DG+   +KAR VA+G  Q    
Sbjct: 831  VNQLLKMKTWDTDEY-YDRKEIDPKRVINSMFIFNKKRDGT---HKARFVARGDIQHPDT 886

Query: 1170 DYSETFSPVVKPITVRLILSLAISRGWPLQQLDVNNAFLNGVLEEEVYMVQPPGFEHKDK 1229
              S   S  V    +   LSLA+   + + QLD+++A+L   ++EE+Y+  PP     DK
Sbjct: 887  YDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPPHLGMNDK 946

Query: 1230 NLVCKLQKALYGLKQAPRAWFHRLKEVLIRFGFQASKCDPSLFTYYSSQGCIYMLVYVDD 1289
              + +L+K+LYGLKQ+   W+  +K  LI+   Q    +   ++       + + ++VDD
Sbjct: 947  --LIRLKKSLYGLKQSGANWYETIKSYLIK---QCGMEEVRGWSCVFKNSQVTICLFVDD 1001

Query: 1290 IIITGASMSLIQQLTAQLHSIFALK--QLGQLDY-----FLGVQVTHLSNGNLLLNQTKY 1342
            +I+    ++  +++   L   +  K   LG+ D       LG+++ +     + L     
Sbjct: 1002 MILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIKYQRGKYMKLGMENS 1061

Query: 1343 ISDLLTKVNM---LDAAAISTPMQCGVKLSKNEGSALKDP-----TEYRSVVGALQYATI 1394
            +++ + K+N+        +S P Q G+ + ++E    +D       E + ++G   Y   
Sbjct: 1062 LTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQDELEIDEDEYKEKVHEMQKLIGLASYVGY 1121

Query: 1395 T-RPEISFAVNKVCQFMAQPHEEHWKAVKRILRYLKGTLTHGILLQPCSMTRP-LPLIAY 1452
              R ++ + +N + Q +  P  +       +++++  T    ++      T P   L+A 
Sbjct: 1122 KFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKNKPTEPDNKLVAI 1181

Query: 1453 CDADWGSDPDDRRSTSGSCVFLGYNLISWTAKKQSLVARSSTEAEYRSLANTTAELLWVQ 1512
             DA +G+ P   +S  G+   L   +I   + K SL   S+TEAE  +++ +   L  + 
Sbjct: 1182 SDASYGNQP-YYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAISESVPLLNNLS 1240

Query: 1513 SLLTELKIPFTIPTVYCDNMSTV-LLTHNPILHTRTKHMEMDIFFVREKVQDKSLLVQHV 1571
             L+ EL     I  +  D+ ST+ ++        R +        +R++V   +L V ++
Sbjct: 1241 YLIQELNKKPIIKGLLTDSRSTISIIKSTNEEKFRNRFFGTKAMRLRDEVSGNNLYVYYI 1300

Query: 1572 PSEHQKADIFTKALSPTRFLLLKDK 1596
             ++   AD+ TK L    F LL +K
Sbjct: 1301 ETKKNIADVMTKPLPIKTFKLLTNK 1325



 Score = 65.5 bits (158), Expect = 1e-09
 Identities = 69/285 (24%), Positives = 113/285 (39%), Gaps = 24/285 (8%)

Query: 658 NVSSTVSDLVSCNSGSGISVYDLWHSRLGHPHHDVLK-----QTLSLCNISVPSNKSVFS 712
           N+S    + V  +  +    Y   H  L H +   ++      T++  N S     S   
Sbjct: 148 NISVPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDRSSAID 207

Query: 713 F-CKACCLSKL--HRLPSSSSNTVYNT--PFELVFADLWGPASLESSCGFLYFLTCVDAC 767
           + C  C + K   HR    S     N+  PF+ +  D++GP          YF++  D  
Sbjct: 208 YQCPDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDET 267

Query: 768 TKYTWVFPL--KKKSDTCATFINFQAMVELQFGHKLKSVQTDGGGEFKPLTSH--FQKLG 823
           TK+ WV+PL  +++      F    A ++ QF   +  +Q D G E+   T H   +K G
Sbjct: 268 TKFRWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNG 327

Query: 824 IIHRLTCPHTHHQNGSVERKHRHIVETGLALLSHASMPLQFWDHAFLAATYLINRMSTTT 883
           I    T       +G  ER +R +++     L  + +P   W  A   +T + N +    
Sbjct: 328 ITPCYTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSL---- 383

Query: 884 LQGASPYFKLYG-QYPDFKSLKVFGSACFPFLRPYNSNKLSLHSK 927
              ASP  K    Q+     L +  S   PF +P   N  + +SK
Sbjct: 384 ---ASPKSKKSARQHAGLAGLDI--STLLPFGQPVIVNDHNPNSK 423


>YMU0_YEAST (Q04670) Transposon Ty1 protein B
          Length = 1328

 Score =  118 bits (296), Expect = 1e-25
 Identities = 149/690 (21%), Positives = 285/690 (40%), Gaps = 82/690 (11%)

Query: 961  HRFPYPILFPTDHSSSSSAEFYPLSTIPIISHTAPPSSPVLAASGHSSPGPQDSPQQQQP 1020
            HR P     P +++SS +    P+ T   +S      S +            D P    P
Sbjct: 664  HRSPSIDASPPENNSSHN--IVPIKTPTTVSEQNTEESIIA-----------DLPLPDLP 710

Query: 1021 PSATLSADDPSTSTPAVVSPPVPSSSAQSADTSA---------SVVAAAPPVIVNTHPMQ 1071
            P +     DP    P + S    SS     D++A         S+      + V+     
Sbjct: 711  PESPTEFPDPFKELPPINSRQTNSSLGGIGDSNAYTTINSKKRSLEDNETEIKVSRDTWN 770

Query: 1072 TRAKNGIVKPRLQPTLLLT-------HLEP-----------TSVKQAMKDAKWYKAMQEE 1113
            T+    +  PR +  + L         ++P           T  K   +  K+ +A  +E
Sbjct: 771  TKNMRSLEPPRSKKRIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIKEKEKYIQAYHKE 830

Query: 1114 YTALMNNGTWTLVPLPANRTPVGCKWI----YRIKENPDGSINKYKARLVAKGYSQVQGF 1169
               L+   TW       +R  +  K +    +      DG+   +KAR VA+G  Q    
Sbjct: 831  VNQLLKMKTWD-TDRYYDRKEIDPKRVINSMFIFNRKRDGT---HKARFVARGDIQ---- 882

Query: 1170 DYSETFSPVVKPITVR-----LILSLAISRGWPLQQLDVNNAFLNGVLEEEVYMVQPPGF 1224
             + +T+ P ++  TV        LSLA+   + + QLD+++A+L   ++EE+Y+  PP  
Sbjct: 883  -HPDTYDPGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPPHL 941

Query: 1225 EHKDKNLVCKLQKALYGLKQAPRAWFHRLKEVLIRFGFQASKCDPSLFTYYSSQGCIYML 1284
               DK  + +L+K+LYGLKQ+   W+  +K  LI+   Q    +   ++       + + 
Sbjct: 942  GMNDK--LIRLKKSLYGLKQSGANWYETIKSYLIK---QCGMEEVRGWSCVFKNSQVTIC 996

Query: 1285 VYVDDIIITGASMSLIQQLTAQLHSIFALK--QLGQLDY-----FLGVQVTHLSNGNLLL 1337
            ++VDD+I+    ++  +++   L   +  K   LG+ D       LG+++ +     + L
Sbjct: 997  LFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIKYQRGKYMKL 1056

Query: 1338 NQTKYISDLLTKVNM---LDAAAISTPMQCGVKLSKNEGSALKDP-----TEYRSVVGAL 1389
                 +++ + K+N+        +S P Q G+ + + E    +D       E + ++G  
Sbjct: 1057 GMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQQELELEEDDYKMKVHEMQKLIGLA 1116

Query: 1390 QYATIT-RPEISFAVNKVCQFMAQPHEEHWKAVKRILRYLKGTLTHGILLQPCSMTRPL- 1447
             Y     R ++ + +N + Q +  P ++       +++++  T    ++       +P  
Sbjct: 1117 SYVGYKFRFDLLYYINTLAQHILFPSKQVLDMTYELIQFIWNTRDKQLIWHKSKPVKPTN 1176

Query: 1448 PLIAYCDADWGSDPDDRRSTSGSCVFLGYNLISWTAKKQSLVARSSTEAEYRSLANTTAE 1507
             L+   DA +G+ P   +S  G+   L   +I   + K SL   S+TEAE  +++ +   
Sbjct: 1177 KLVVISDASYGNQP-YYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAISESVPL 1235

Query: 1508 LLWVQSLLTELKIPFTIPTVYCDNMSTV-LLTHNPILHTRTKHMEMDIFFVREKVQDKSL 1566
            L  +  L+ EL        +  D+ ST+ ++  N     R +        +R++V    L
Sbjct: 1236 LNNLSHLVQELNKKPITKGLLTDSKSTISIIISNNEEKFRNRFFGTKAMRLRDEVSGNHL 1295

Query: 1567 LVQHVPSEHQKADIFTKALSPTRFLLLKDK 1596
             V ++ ++   AD+ TK L    F LL +K
Sbjct: 1296 HVCYIETKKNIADVMTKPLPIKTFKLLTNK 1325



 Score = 64.3 bits (155), Expect = 3e-09
 Identities = 68/285 (23%), Positives = 114/285 (39%), Gaps = 24/285 (8%)

Query: 658 NVSSTVSDLVSCNSGSGISVYDLWHSRLGHPHHDVLKQTLSLCNIS------VPSNKSVF 711
           N+S    + V  +  +    Y   H  L H +   ++ +L    I+      V  + ++ 
Sbjct: 148 NISVPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAID 207

Query: 712 SFCKACCLSKL--HRLPSSSSNTVYNT--PFELVFADLWGPASLESSCGFLYFLTCVDAC 767
             C  C + K   HR    S     N+  PF+ +  D++GP          YF++  D  
Sbjct: 208 YQCPDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDET 267

Query: 768 TKYTWVFPL--KKKSDTCATFINFQAMVELQFGHKLKSVQTDGGGEFKPLTSH--FQKLG 823
           TK+ WV+PL  +++      F    A ++ QF   +  +Q D G E+   T H   +K G
Sbjct: 268 TKFRWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNG 327

Query: 824 IIHRLTCPHTHHQNGSVERKHRHIVETGLALLSHASMPLQFWDHAFLAATYLINRMSTTT 883
           I    T       +G  ER +R +++     L  + +P   W  A   +T + N +    
Sbjct: 328 ITPCYTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSL---- 383

Query: 884 LQGASPYFKLYG-QYPDFKSLKVFGSACFPFLRPYNSNKLSLHSK 927
              ASP  K    Q+     L +  S   PF +P   N  + +SK
Sbjct: 384 ---ASPKSKKSARQHAGLAGLDI--STLLPFGQPVIVNDHNPNSK 423


>YME4_YEAST (Q04711) Transposon Ty1 protein B
          Length = 1328

 Score =  118 bits (296), Expect = 1e-25
 Identities = 150/685 (21%), Positives = 281/685 (40%), Gaps = 72/685 (10%)

Query: 961  HRFPYPILFPTDHSSSSSAEFYPLSTIPIISHTAPPSSPVLAASGHSSPGPQDSPQQQQP 1020
            HR P     P +++SS +    P+ T   +S      S +            D P    P
Sbjct: 664  HRSPSIDASPPENNSSHN--IVPIKTPTTVSEQNTEESIIA-----------DLPLPDLP 710

Query: 1021 PSATLSADDPSTSTPAVVSPPVPSSSAQSADTSA---------SVVAAAPPVIVNTHPMQ 1071
            P +     DP    P + S    SS     D++A         S+      + V+     
Sbjct: 711  PESPTEFPDPFKELPPINSHQTNSSLGGIGDSNAYTTINSKKRSLEDNETEIKVSRDTWN 770

Query: 1072 TRAKNGIVKPRLQPTLLL-------THLEP-----------TSVKQAMKDAKWYKAMQEE 1113
            T+    +  PR +  + L         ++P           T  K   +  K+ +A  +E
Sbjct: 771  TKNMRSLEPPRSKKRIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIKEKEKYIEAYHKE 830

Query: 1114 YTALMNNGTWTLVPLPANRTPVGCKWI----YRIKENPDGSINKYKARLVAKGYSQVQGF 1169
               L+   TW       +R  +  K +    +      DG+   +KAR VA+G  Q    
Sbjct: 831  VNQLLKMNTWD-TDKYYDRKEIDPKRVINSMFIFNRKRDGT---HKARFVARGDIQHPDT 886

Query: 1170 DYSETFSPVVKPITVRLILSLAISRGWPLQQLDVNNAFLNGVLEEEVYMVQPPGFEHKDK 1229
              S   S  V    +   LSLA+   + + QLD+++A+L   ++EE+Y+  PP     DK
Sbjct: 887  YDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPPHLGMNDK 946

Query: 1230 NLVCKLQKALYGLKQAPRAWFHRLKEVLIRFGFQASKCDPSLFTYYSSQGCIYMLVYVDD 1289
              + +L+K+LYGLKQ+   W+  +K  LI+   Q    +   ++       + + ++VDD
Sbjct: 947  --LIRLKKSLYGLKQSGANWYETIKSYLIK---QCGMEEVRGWSCVFKNSQVTICLFVDD 1001

Query: 1290 IIITGASMSLIQQLTAQLHSIFALK--QLGQLDY-----FLGVQVTHLSNGNLLLNQTKY 1342
            +I+    ++  +++   L   +  K   LG+ D       LG+++ +     + L     
Sbjct: 1002 MILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIKYQRGKYMKLGMENS 1061

Query: 1343 ISDLLTKVNM---LDAAAISTPMQCGVKLSKNEGSALKDP-----TEYRSVVGALQYATI 1394
            +++ + K+N+        +S P Q G+ + ++E    +D       E + ++G   Y   
Sbjct: 1062 LTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQDELEIDEDEYKEKVHEMQKLIGLASYVGY 1121

Query: 1395 T-RPEISFAVNKVCQFMAQPHEEHWKAVKRILRYLKGTLTHGILLQPCSMTRP-LPLIAY 1452
              R ++ + +N + Q +  P  +       +++++  T    ++      T P   L+A 
Sbjct: 1122 KFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKNKPTEPDNKLVAI 1181

Query: 1453 CDADWGSDPDDRRSTSGSCVFLGYNLISWTAKKQSLVARSSTEAEYRSLANTTAELLWVQ 1512
             DA +G+ P   +S  G+   L   +I   + K SL   S+TEAE  +++ +   L  + 
Sbjct: 1182 SDASYGNQP-YYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAISESVPLLNNLS 1240

Query: 1513 SLLTELKIPFTIPTVYCDNMSTV-LLTHNPILHTRTKHMEMDIFFVREKVQDKSLLVQHV 1571
             L+ EL        +  D+ ST+ ++  N     R +        +R++V    L V ++
Sbjct: 1241 HLVQELNKKPITKGLLTDSKSTISIIISNNEEKFRNRFFGTKAMRLRDEVSGNHLHVCYI 1300

Query: 1572 PSEHQKADIFTKALSPTRFLLLKDK 1596
             ++   AD+ TK L    F LL +K
Sbjct: 1301 ETKKNIADVMTKPLPIKTFKLLTNK 1325



 Score = 64.3 bits (155), Expect = 3e-09
 Identities = 68/285 (23%), Positives = 114/285 (39%), Gaps = 24/285 (8%)

Query: 658 NVSSTVSDLVSCNSGSGISVYDLWHSRLGHPHHDVLKQTLSLCNIS------VPSNKSVF 711
           N+S    + V  +  +    Y   H  L H +   ++ +L    I+      V  + ++ 
Sbjct: 148 NISVPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAID 207

Query: 712 SFCKACCLSKL--HRLPSSSSNTVYNT--PFELVFADLWGPASLESSCGFLYFLTCVDAC 767
             C  C + K   HR    S     N+  PF+ +  D++GP          YF++  D  
Sbjct: 208 YQCPDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDET 267

Query: 768 TKYTWVFPL--KKKSDTCATFINFQAMVELQFGHKLKSVQTDGGGEFKPLTSH--FQKLG 823
           TK+ WV+PL  +++      F    A ++ QF   +  +Q D G E+   T H   +K G
Sbjct: 268 TKFRWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNG 327

Query: 824 IIHRLTCPHTHHQNGSVERKHRHIVETGLALLSHASMPLQFWDHAFLAATYLINRMSTTT 883
           I    T       +G  ER +R +++     L  + +P   W  A   +T + N +    
Sbjct: 328 ITPCYTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSL---- 383

Query: 884 LQGASPYFKLYG-QYPDFKSLKVFGSACFPFLRPYNSNKLSLHSK 927
              ASP  K    Q+     L +  S   PF +P   N  + +SK
Sbjct: 384 ---ASPKSKKSARQHAGLAGLDI--STLLPFGQPVIVNDHNPNSK 423


>YJZ9_YEAST (P47100) Transposon Ty1 protein B
          Length = 1755

 Score =  117 bits (292), Expect = 3e-25
 Identities = 150/686 (21%), Positives = 286/686 (40%), Gaps = 74/686 (10%)

Query: 961  HRFPYPILFPTDHSSSSSAEFYPLSTIPIISHTAPPSSPVLAASGHSSPGPQDSPQQQQP 1020
            HR P     P +++SS +    P+ T   +S      S +            D P    P
Sbjct: 1091 HRSPSIDASPPENNSSHN--IVPIKTPTTVSEQNTEESIIA-----------DLPLPDLP 1137

Query: 1021 PSATLSADDPSTSTPAVVSPPVPSSSAQSADTSA---------SVVAAAPPVIVNTHPMQ 1071
            P +     DP    P + S    SS     D++A         S+      + V+     
Sbjct: 1138 PESPTEFPDPFKELPPINSRQTNSSLGGIGDSNAYTTINSKKRSLEDNETEIKVSRDTWN 1197

Query: 1072 TRAKNGIVKPRLQPTLLLT-------HLEP-----------TSVKQAMKDAKWYKAMQEE 1113
            T+    +  PR +  + L         ++P           T  K   +  K+ +A  +E
Sbjct: 1198 TKNMRSLEPPRSKKRIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIKEKEKYIEAYHKE 1257

Query: 1114 YTALMNNGTWTLVPLPANRTPVGCKWI----YRIKENPDGSINKYKARLVAKGYSQVQGF 1169
               L+   TW       +R  +  K +    +   +  DG+   +KAR VA+G  Q    
Sbjct: 1258 VNQLLKMKTWDTDEY-YDRKEIDPKRVINSMFIFNKKRDGT---HKARFVARGDIQHPDT 1313

Query: 1170 DYSETFSPVVKPITVRLILSLAISRGWPLQQLDVNNAFLNGVLEEEVYMVQPPGFEHKDK 1229
              S   S  V    +   LSLA+   + + QLD+++A+L   ++EE+Y+  PP     DK
Sbjct: 1314 YDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPPHLGMNDK 1373

Query: 1230 NLVCKLQKALYGLKQAPRAWFHRLKEVLIRFGFQASKCDPSLFTYYSSQGCIYMLVYVDD 1289
              + +L+K+LYGLKQ+   W+  +K  LI+   Q    +   ++       + + ++VDD
Sbjct: 1374 --LIRLKKSLYGLKQSGANWYETIKSYLIQ---QCGMEEVRGWSCVFKNSQVTICLFVDD 1428

Query: 1290 IIITGASMSLIQQLTAQLHSIFALK--QLGQLDY-----FLGVQVTHLSNGNLLLNQTKY 1342
            +++   +++  +++  +L   +  K   LG+ D       LG+++ +     + L     
Sbjct: 1429 MVLFSKNLNSNKRIIEKLKMQYDTKIINLGESDEEIQYDILGLEIKYQRGKYMKLGMENS 1488

Query: 1343 ISDLLTKVNM---LDAAAISTPMQCGVKLSKNEGSALKDP-----TEYRSVVGALQYATI 1394
            +++ + K+N+        +S P Q G+ + + E    +D       E + ++G   Y   
Sbjct: 1489 LTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQQELELEEDDYKMKVHEMQKLIGLASYVGY 1548

Query: 1395 T-RPEISFAVNKVCQFMAQPHEEHWKAVKRILRYLKGTLTHGILLQPCSMTRPL-PLIAY 1452
              R ++ + +N + Q +  P ++       +++++  T    ++       +P   L+  
Sbjct: 1549 KFRFDLLYYINTLAQHILFPSKQVLDMTYELIQFIWNTRDKQLIWHKSKPVKPTNKLVVI 1608

Query: 1453 CDADWGSDPDDRRSTSGSCVFLGYNLISWTAKKQSLVARSSTEAEYRSLANTTAELLWVQ 1512
             DA +G+ P   +S  G+   L   +I   + K SL   S+TEAE  +++ +   L  + 
Sbjct: 1609 SDASYGNQP-YYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAISESVPLLNNLS 1667

Query: 1513 SLLTEL-KIPFTIPTVYCDNMSTV-LLTHNPILHTRTKHMEMDIFFVREKVQDKSLLVQH 1570
             L+ EL K P T   +  D+ ST+ ++  N     R +        +R++V    L V +
Sbjct: 1668 YLIQELDKKPIT-KGLLTDSKSTISIIISNNEEKFRNRFFGTKAMRLRDEVSGNHLHVCY 1726

Query: 1571 VPSEHQKADIFTKALSPTRFLLLKDK 1596
            + ++   AD+ TK L    F LL +K
Sbjct: 1727 IETKKNIADVMTKPLPIKTFKLLTNK 1752



 Score = 64.3 bits (155), Expect = 3e-09
 Identities = 68/285 (23%), Positives = 114/285 (39%), Gaps = 24/285 (8%)

Query: 658 NVSSTVSDLVSCNSGSGISVYDLWHSRLGHPHHDVLKQTLSLCNIS------VPSNKSVF 711
           N+S    + V  +  +    Y   H  L H +   ++ +L    I+      V  + ++ 
Sbjct: 575 NISVPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAID 634

Query: 712 SFCKACCLSKL--HRLPSSSSNTVYNT--PFELVFADLWGPASLESSCGFLYFLTCVDAC 767
             C  C + K   HR    S     N+  PF+ +  D++GP          YF++  D  
Sbjct: 635 YQCPDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDET 694

Query: 768 TKYTWVFPL--KKKSDTCATFINFQAMVELQFGHKLKSVQTDGGGEFKPLTSH--FQKLG 823
           TK+ WV+PL  +++      F    A ++ QF   +  +Q D G E+   T H   +K G
Sbjct: 695 TKFRWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNG 754

Query: 824 IIHRLTCPHTHHQNGSVERKHRHIVETGLALLSHASMPLQFWDHAFLAATYLINRMSTTT 883
           I    T       +G  ER +R +++     L  + +P   W  A   +T + N +    
Sbjct: 755 ITPCYTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSL---- 810

Query: 884 LQGASPYFKLYG-QYPDFKSLKVFGSACFPFLRPYNSNKLSLHSK 927
              ASP  K    Q+     L +  S   PF +P   N  + +SK
Sbjct: 811 ---ASPKSKKSARQHAGLAGLDI--STLLPFGQPVIVNDHNPNSK 850


>M820_ARATH (P92520) Hypothetical mitochondrial protein AtMg00820
            (ORF170)
          Length = 170

 Score =  116 bits (291), Expect = 4e-25
 Identities = 65/140 (46%), Positives = 90/140 (63%), Gaps = 10/140 (7%)

Query: 1070 MQTRAKNGIVK--PRLQPTLLLT-HLEPTSVKQAMKDAKWYKAMQEEYTALMNNGTWTLV 1126
            M TR+K GI K  P+   T+  T   EP SV  A+KD  W +AMQEE  AL  N TW LV
Sbjct: 1    MLTRSKAGINKLNPKYSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILV 60

Query: 1127 PLPANRTPVGCKWIYRIKENPDGSINKYKARLVAKGYSQVQGFDYSETFSPVVKPITVRL 1186
            P P N+  +GCKW+++ K + DG++++ KARLVAKG+ Q +G  + ET+SPVV+  T+R 
Sbjct: 61   PPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRT 120

Query: 1187 ILSLAISRGWPLQQLDVNNA 1206
            IL++A       QQL+V  +
Sbjct: 121  ILNVA-------QQLEVGQS 133


>YJZ7_YEAST (P47098) Transposon Ty1 protein B
          Length = 1755

 Score =  116 bits (290), Expect = 6e-25
 Identities = 148/685 (21%), Positives = 282/685 (40%), Gaps = 72/685 (10%)

Query: 961  HRFPYPILFPTDHSSSSSAEFYPLSTIPIISHTAPPSSPVLAASGHSSPGPQDSPQQQQP 1020
            HR P     P +++SS +    P+ T   +S      S +            D P    P
Sbjct: 1091 HRSPSIDASPPENNSSHN--IVPIKTPTTVSEQNTEESIIA-----------DLPLPDLP 1137

Query: 1021 PSATLSADDPSTSTPAVVSPPVPSSSAQSADTSA---------SVVAAAPPVIVNTHPMQ 1071
            P +     DP    P + S    SS     D++A         S+      + V+     
Sbjct: 1138 PESPTEFPDPFKELPPINSHQTNSSLGGIGDSNAYTTINSKKRSLEDNETEIKVSRDTWN 1197

Query: 1072 TRAKNGIVKPRLQPTLLLT-------HLEP-----------TSVKQAMKDAKWYKAMQEE 1113
            T+    +  PR +  + L         ++P           T  K   +  K+ +A  +E
Sbjct: 1198 TKNMRSLEPPRSKKRIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIKEKEKYIEAYHKE 1257

Query: 1114 YTALMNNGTWTLVPLPANRTPVGCKWI----YRIKENPDGSINKYKARLVAKGYSQVQGF 1169
               L+   TW       +R  +  K +    +   +  DG+   +KAR VA+G  Q    
Sbjct: 1258 VNQLLKMKTWDTDEY-YDRKEIDPKRVINSMFIFNKKRDGT---HKARFVARGDIQHPDT 1313

Query: 1170 DYSETFSPVVKPITVRLILSLAISRGWPLQQLDVNNAFLNGVLEEEVYMVQPPGFEHKDK 1229
              +   S  V    +   LSLA+   + + QLD+++A+L   ++EE+Y+  PP     DK
Sbjct: 1314 YDTGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPPHLGMNDK 1373

Query: 1230 NLVCKLQKALYGLKQAPRAWFHRLKEVLIRFGFQASKCDPSLFTYYSSQGCIYMLVYVDD 1289
              + +L+K+ YGLKQ+   W+  +K  LI+   Q    +   ++       + + ++VDD
Sbjct: 1374 --LIRLKKSHYGLKQSGANWYETIKSYLIK---QCGMEEVRGWSCVFKNSQVTICLFVDD 1428

Query: 1290 IIITGASMSLIQQLTAQLHSIFALK--QLGQLDY-----FLGVQVTHLSNGNLLLNQTKY 1342
            +I+    ++  +++   L   +  K   LG+ D       LG+++ +     + L     
Sbjct: 1429 MILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIKYQRGKYMKLGMENS 1488

Query: 1343 ISDLLTKVNM---LDAAAISTPMQCGVKLSKNEGSALKDP-----TEYRSVVGALQYATI 1394
            +++ + K+N+        +S P Q G+ + ++E    +D       E + ++G   Y   
Sbjct: 1489 LTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQDELEIDEDEYKEKVHEMQKLIGLASYVGY 1548

Query: 1395 T-RPEISFAVNKVCQFMAQPHEEHWKAVKRILRYLKGTLTHGILLQPCSMTRP-LPLIAY 1452
              R ++ + +N + Q +  P  +       +++++  T    ++      T P   L+A 
Sbjct: 1549 KFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKNKPTEPDNKLVAI 1608

Query: 1453 CDADWGSDPDDRRSTSGSCVFLGYNLISWTAKKQSLVARSSTEAEYRSLANTTAELLWVQ 1512
             DA +G+ P   +S  G+   L   +I   + K SL   S+TEAE  +++ +   L  + 
Sbjct: 1609 SDASYGNQP-YYKSQIGNIFLLNGKVIGGKSTKASLTCTSTTEAEIHAISESVPLLNNLS 1667

Query: 1513 SLLTELKIPFTIPTVYCDNMSTV-LLTHNPILHTRTKHMEMDIFFVREKVQDKSLLVQHV 1571
             L+ EL     I  +  D+ ST+ ++        R +        +R++V   +L V ++
Sbjct: 1668 YLIQELNKKPIIKGLLTDSRSTISIIKSTNEEKFRNRFFGTKAMRLRDEVSGNNLYVYYI 1727

Query: 1572 PSEHQKADIFTKALSPTRFLLLKDK 1596
             ++   AD+ TK L    F LL +K
Sbjct: 1728 ETKKNIADVMTKPLPIKTFKLLTNK 1752



 Score = 65.1 bits (157), Expect = 2e-09
 Identities = 104/467 (22%), Positives = 175/467 (37%), Gaps = 59/467 (12%)

Query: 496 NNPGIFVDHVPSSSQEQLLVGNGQGLPIQSIGSALLPSSFNPTASL---ILKKLLLVPSI 552
           N+P    D +  S+ E + + N   L   ++G  L  S+ N T      +   LLL    
Sbjct: 408 NSPSTDNDSISKSTTEPIQLNNKHDL---TLGQELTESTVNHTNHSDDELPGHLLLDSGA 464

Query: 553 TKNLVSVSRFARDNNVFFSFHANHCSVHHQDTYEL------LLTGTVGDDGLYYFDGPLT 606
           ++ L+             S H  H +  + D   +      +    +GD   ++ D   T
Sbjct: 465 SRTLIR------------SAHHIHSASSNPDINVVDAQKRNIPINAIGDLQFHFQDNTKT 512

Query: 607 --KASSQPQSSSPLSSIQACLASKSAANKASPAIDLQSATV-SPIVPCNNADSV------ 657
             K    P  +  L S+    A    A      ++    TV +PIV   +   V      
Sbjct: 513 SIKVLHTPNIAYDLLSLNELAAVDITACFTKNVLERSDGTVLAPIVQYGDFYWVSKRYLL 572

Query: 658 --NVSSTVSDLVSCNSGSGISVYDLWHSRLGHPHHDVLKQTLSLCNIS------VPSNKS 709
             N+S    + V  +  +    Y   H  L H +   ++ +L    I+      V  + +
Sbjct: 573 PSNISVPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSA 632

Query: 710 VFSFCKACCLSKL--HRLPSSSSNTVYNT--PFELVFADLWGPASLESSCGFLYFLTCVD 765
           +   C  C + K   HR    S     N+  PF+ +  D++GP          YF++  D
Sbjct: 633 IDYQCPDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTD 692

Query: 766 ACTKYTWVFPL--KKKSDTCATFINFQAMVELQFGHKLKSVQTDGGGEFKPLTSH--FQK 821
             TK+ WV+PL  +++      F    A ++ QF   +  +Q D G E+   T H   +K
Sbjct: 693 ETTKFRWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEK 752

Query: 822 LGIIHRLTCPHTHHQNGSVERKHRHIVETGLALLSHASMPLQFWDHAFLAATYLINRMST 881
            GI    T       +G  ER +R +++     L  + +P   W  A   +T + N +  
Sbjct: 753 NGITPCYTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSL-- 810

Query: 882 TTLQGASPYFKLYG-QYPDFKSLKVFGSACFPFLRPYNSNKLSLHSK 927
                ASP  K    Q+     L +  S   PF +P   N  + +SK
Sbjct: 811 -----ASPKSKKSARQHAGLAGLDI--STLLPFGQPVIVNDHNPNSK 850


>YCB9_YEAST (P25384) Transposon Ty2 protein B (Ty1-17 protein B)
          Length = 1770

 Score =  115 bits (289), Expect = 7e-25
 Identities = 121/517 (23%), Positives = 233/517 (44%), Gaps = 38/517 (7%)

Query: 1105 KWYKAMQEEYTALMNNGTWTLVPLPANRTPVGCKWI----YRIKENPDGSINKYKARLVA 1160
            ++ +A  +E + L+   TW       +R  +  K +    +   +  DG+   +KAR VA
Sbjct: 1264 RYVEAYHKEISQLLKMNTWDTNKY-YDRNDIDPKKVINSMFIFNKKRDGT---HKARFVA 1319

Query: 1161 KGYSQVQGFDYSETFSPVVKPITVRLILSLAISRGWPLQQLDVNNAFLNGVLEEEVYMVQ 1220
            +G  Q      S+  S  V    +   LS+A+   + + QLD+++A+L   ++EE+Y+  
Sbjct: 1320 RGDIQHPDTYDSDMQSNTVHHYALMTSLSIALDNDYYITQLDISSAYLYADIKEELYIRP 1379

Query: 1221 PPGFEHKDKNLVCKLQKALYGLKQAPRAWFHRLKEVLIRFGFQASKCDPSLFTYYS---S 1277
            PP     DK L  +L+K+LYGLKQ+   W+  +K  LI      + CD      +S    
Sbjct: 1380 PPHLGLNDKLL--RLRKSLYGLKQSGANWYETIKSYLI------NCCDMQEVRGWSCVFK 1431

Query: 1278 QGCIYMLVYVDDIIITGASMSLIQQLTAQLHSIFALK--QLGQLDY-----FLGVQVTHL 1330
               + + ++VDD+I+    ++  +++   L   +  K   LG+ D       LG+++ + 
Sbjct: 1432 NSQVTICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIKYQ 1491

Query: 1331 SNGNLLLNQTKYISDLLTKVNM---LDAAAISTPMQCGVKLSKNEGSALKDP-----TEY 1382
             +  + L   K +++ L K+N+        +  P Q G  + ++E    +D       E 
Sbjct: 1492 RSKYMKLGMEKSLTEKLPKLNVPLNPKGKKLRAPGQPGHYIDQDELEIDEDEYKEKVHEM 1551

Query: 1383 RSVVGALQYATIT-RPEISFAVNKVCQFMAQPHEEHWKAVKRILRYLKGTLTHGILLQPC 1441
            + ++G   Y     R ++ + +N + Q +  P  +       +++++  T    ++    
Sbjct: 1552 QKLIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKN 1611

Query: 1442 SMTRP-LPLIAYCDADWGSDPDDRRSTSGSCVFLGYNLISWTAKKQSLVARSSTEAEYRS 1500
              T+P   L+A  DA +G+ P   +S  G+   L   +I   + K SL   S+TEAE  +
Sbjct: 1612 KPTKPDNKLVAISDASYGNQP-YYKSQIGNIFLLNGKVIGGKSTKASLTCTSTTEAEIHA 1670

Query: 1501 LANTTAELLWVQSLLTELKIPFTIPTVYCDNMSTV-LLTHNPILHTRTKHMEMDIFFVRE 1559
            ++     L  +  L+ EL     I  +  D+ ST+ ++        R +        +R+
Sbjct: 1671 VSEAIPLLNNLSHLVQELNKKPIIKGLLTDSRSTISIIKSTNEEKFRNRFFGTKAMRLRD 1730

Query: 1560 KVQDKSLLVQHVPSEHQKADIFTKALSPTRFLLLKDK 1596
            +V   +L V ++ ++   AD+ TK L    F LL +K
Sbjct: 1731 EVSGNNLYVYYIETKKNIADVMTKPLPIKTFKLLTNK 1767



 Score = 65.9 bits (159), Expect = 9e-10
 Identities = 60/240 (25%), Positives = 100/240 (41%), Gaps = 20/240 (8%)

Query: 659 VSSTVSDLVSCNSGSGISV----YDLWHSRLGHPHHDVLKQTLSLCNISVP-------SN 707
           + S +S L   N     SV    Y L H  LGH +   ++++L    ++         SN
Sbjct: 568 IPSHISKLTINNVNKSKSVNKYPYPLIHRMLGHANFRSIQKSLKKNAVTYLKESDIEWSN 627

Query: 708 KSVFSFCKACCLSKL--HRLPSSSSNTVYNT--PFELVFADLWGPASLESSCGFLYFLTC 763
            S +  C  C + K   HR    S      +  PF+ +  D++GP          YF++ 
Sbjct: 628 ASTYQ-CPDCLIGKSTKHRHVKGSRLKYQESYEPFQYLHTDIFGPVHHLPKSAPSYFISF 686

Query: 764 VDACTKYTWVFPL--KKKSDTCATFINFQAMVELQFGHKLKSVQTDGGGEFKPLTSH--F 819
            D  T++ WV+PL  +++      F +  A ++ QF  ++  +Q D G E+   T H  F
Sbjct: 687 TDEKTRFQWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTNKTLHKFF 746

Query: 820 QKLGIIHRLTCPHTHHQNGSVERKHRHIVETGLALLSHASMPLQFWDHAFLAATYLINRM 879
              GI    T       +G  ER +R ++     LL  + +P   W  A   +T + N +
Sbjct: 747 TNRGITACYTTTADSRAHGVAERLNRTLLNDCRTLLHCSGLPNHLWFSAVEFSTIIRNSL 806


>YMT5_YEAST (Q04214) Transposon Ty1 protein B
          Length = 1328

 Score =  114 bits (284), Expect = 3e-24
 Identities = 120/522 (22%), Positives = 235/522 (44%), Gaps = 34/522 (6%)

Query: 1098 KQAMKDAKWYKAMQEEYTALMNNGTWTLVPLPANRTPVGCKWI----YRIKENPDGSINK 1153
            K   +  K+ +A  +E   L+   TW       +R  +  K +    +      DG+   
Sbjct: 815  KDIKEKEKYIEAYHKEVNQLLKMKTWDTDKY-YDRKEIDPKRVINSMFIFNRKRDGT--- 870

Query: 1154 YKARLVAKGYSQVQGFDYSETFSPVVKPITVRLILSLAISRGWPLQQLDVNNAFLNGVLE 1213
            +KAR VA+G  Q      S   S  V    +   LSLA+   + + QLD+++A+L   ++
Sbjct: 871  HKARFVARGDIQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIK 930

Query: 1214 EEVYMVQPPGFEHKDKNLVCKLQKALYGLKQAPRAWFHRLKEVLIRFGFQASKCDPSLFT 1273
            EE+Y+  PP     DK  + +L+K+LYGLKQ+   W+  +K  LI+   Q    +   ++
Sbjct: 931  EELYIRPPPHLGMNDK--LIRLKKSLYGLKQSGANWYETIKSYLIK---QCGMEEVRGWS 985

Query: 1274 YYSSQGCIYMLVYVDDIIITGASMSLIQQLTAQLHSIFALK--QLGQLDY-----FLGVQ 1326
                   + + ++VDD+++   +++  +++  +L   +  K   LG+ D       LG++
Sbjct: 986  CVFENSQVTICLFVDDMVLFSKNLNSNKRIIDKLKMQYDTKIINLGESDEEIQYDILGLE 1045

Query: 1327 VTHLSNGNLLLNQTKYISDLLTKVNM---LDAAAISTPMQCGVKLSKNEGSALKDP---- 1379
            + +     + L     +++ + K+N+        +S P Q G+ + + E    +D     
Sbjct: 1046 IKYQRGKYMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQQELELEEDDYKMK 1105

Query: 1380 -TEYRSVVGALQYATIT-RPEISFAVNKVCQFMAQPHEEHWKAVKRILRYLKGTLTHGIL 1437
              E + ++G   Y     R ++ + +N + Q +  P ++       +++++  T    ++
Sbjct: 1106 VHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSKQVLDMTYELIQFIWNTRDKQLI 1165

Query: 1438 LQPCSMTRPL-PLIAYCDADWGSDPDDRRSTSGSCVFLGYNLISWTAKKQSLVARSSTEA 1496
                   +P   L+   DA +G+ P   +S  G+   L   +I   + K SL   S+TEA
Sbjct: 1166 WHKSKPVKPTNKLVVISDASYGNQP-YYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEA 1224

Query: 1497 EYRSLANTTAELLWVQSLLTEL-KIPFTIPTVYCDNMSTV-LLTHNPILHTRTKHMEMDI 1554
            E  +++ +   L  +  L+ EL K P T   +  D+ ST+ ++  N     R +      
Sbjct: 1225 EIHAISESVPLLNNLSYLIQELDKKPIT-KGLLTDSKSTISIIISNNEEKFRNRFFGTKA 1283

Query: 1555 FFVREKVQDKSLLVQHVPSEHQKADIFTKALSPTRFLLLKDK 1596
              +R++V    L V ++ ++   AD+ TK L    F LL +K
Sbjct: 1284 MRLRDEVSGNHLHVCYIETKKNIADVMTKPLPIKTFKLLTNK 1325



 Score = 64.3 bits (155), Expect = 3e-09
 Identities = 68/285 (23%), Positives = 114/285 (39%), Gaps = 24/285 (8%)

Query: 658 NVSSTVSDLVSCNSGSGISVYDLWHSRLGHPHHDVLKQTLSLCNIS------VPSNKSVF 711
           N+S    + V  +  +    Y   H  L H +   ++ +L    I+      V  + ++ 
Sbjct: 148 NISVPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAID 207

Query: 712 SFCKACCLSKL--HRLPSSSSNTVYNT--PFELVFADLWGPASLESSCGFLYFLTCVDAC 767
             C  C + K   HR    S     N+  PF+ +  D++GP          YF++  D  
Sbjct: 208 YQCPDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDET 267

Query: 768 TKYTWVFPL--KKKSDTCATFINFQAMVELQFGHKLKSVQTDGGGEFKPLTSH--FQKLG 823
           TK+ WV+PL  +++      F    A ++ QF   +  +Q D G E+   T H   +K G
Sbjct: 268 TKFRWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNG 327

Query: 824 IIHRLTCPHTHHQNGSVERKHRHIVETGLALLSHASMPLQFWDHAFLAATYLINRMSTTT 883
           I    T       +G  ER +R +++     L  + +P   W  A   +T + N +    
Sbjct: 328 ITPCYTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSL---- 383

Query: 884 LQGASPYFKLYG-QYPDFKSLKVFGSACFPFLRPYNSNKLSLHSK 927
              ASP  K    Q+     L +  S   PF +P   N  + +SK
Sbjct: 384 ---ASPKSKKSARQHAGLAGLDI--STLLPFGQPVIVNDHNPNSK 423


>M240_ARATH (P93290) Hypothetical mitochondrial protein AtMg00240
            (ORF111a)
          Length = 111

 Score = 73.6 bits (179), Expect = 4e-12
 Identities = 36/81 (44%), Positives = 51/81 (62%), Gaps = 3/81 (3%)

Query: 1391 YATITRPEISFAVNKVCQFMAQPHEEHWKAVKRILRYLKGTLTHGILLQPCSMTRPLPLI 1450
            Y TITRP+++FAVN++ QF +       +AV ++L Y+KGT+  G+     S T  L L 
Sbjct: 2    YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFY---SATSDLQLK 58

Query: 1451 AYCDADWGSDPDDRRSTSGSC 1471
            A+ D+DW S PD RRS +G C
Sbjct: 59   AFADSDWASCPDTRRSVTGFC 79


>TNK1_HUMAN (O95271) Tankyrase 1 (EC 2.4.2.30) (TANK1) (Tankyrase I)
           (TNKS-1) (TRF1-interacting ankyrin-related ADP-ribose
           polymerase)
          Length = 1327

 Score = 53.9 bits (128), Expect = 3e-06
 Identities = 49/154 (31%), Positives = 69/154 (43%), Gaps = 13/154 (8%)

Query: 236 QAQNSPSSSTAPAPPPPQAMWTQPAPAPSSTMAQPPATSVAP--SQPVDTAVDSGYGNRD 293
           Q Q +P +S  P PPPP      P  AP +T A P A+ +AP  S     A+  G G+RD
Sbjct: 17  QLQPAPGASAPPPPPPPPL---SPGLAPGTTPASPTASGLAPFASPRHGLALPEGDGSRD 73

Query: 294 EQNR-NSGGYGRGRGRGRGRNVQCTYCSK------WGHDAASCWSRPSGVSSNANSSANS 346
             +R  S     G       +  CT  +           AA     P+G  SN + S++S
Sbjct: 74  PPDRPRSPDPVDGTSCCSTTSTICTVAAAPVVPAVSTSSAAGVAPNPAGSGSNNSPSSSS 133

Query: 347 AQSGNSGSNFSVPGVNLGFSPMQFGGFPSMANFG 380
           + + +S S+ S PG +L  SP +  G  S A  G
Sbjct: 134 SPTSSSSSSPSSPGSSLAESP-EAAGVSSTAPLG 166


>POL_FOAMV (P14350) Pol polyprotein [Contains: Reverse
           transcriptase/ribonuclease H (EC 2.7.7.49) (EC 3.1.26.4)
           (RT); Integrase (IN)]
          Length = 886

 Score = 49.7 bits (117), Expect = 7e-05
 Identities = 44/132 (33%), Positives = 61/132 (45%), Gaps = 10/132 (7%)

Query: 737 PFELVFADLWGPASLESSCGFLYFLTCVDACTKYTWVFPLKKKSDTCATFINFQAMVELQ 796
           PF+  F D  GP  L  S G+LY L  VD  T +TW++P K  S T AT  +   +  + 
Sbjct: 675 PFDKFFIDYIGP--LPPSQGYLYVLVVVDGMTGFTWLYPTKAPS-TSATVKSLNVLTSIA 731

Query: 797 FGHKLKSVQTDGGGEFKPLT-SHFQKLGIIHRLTCPHTHHQNGS-VERKHRHIVETGLAL 854
                K + +D G  F   T + + K   IH       H Q+GS VERK+  I      L
Sbjct: 732 IP---KVIHSDQGAAFTSSTFAEWAKERGIHLEFSTPYHPQSGSKVERKNSDIKRLLTKL 788

Query: 855 LSHASMPLQFWD 866
           L     P +++D
Sbjct: 789 L--VGRPTKWYD 798


>NUP1_RAT (P70581) Nucleoporin p58/p45 (Nucleoporin-like protein 1)
          Length = 585

 Score = 49.3 bits (116), Expect = 9e-05
 Identities = 46/150 (30%), Positives = 62/150 (40%), Gaps = 20/150 (13%)

Query: 238 QNSPSSSTAPAPPPPQAMWTQPAPAPSSTMAQPPATSVAPS------QPVDTAVDSGYGN 291
           QN+P  +T P P          A A + T  Q PAT   PS       P  + + +G  +
Sbjct: 429 QNAPRVTTGPTPFSTMPNAAAVAMAATLTQQQQPATGPQPSLGVSFGTPFGSGIGTGLQS 488

Query: 292 RDEQNRNSGGYGRGRGRGRGRNVQCTYCSKWGHDAASCWSRPSGVSSNANSSANSAQSGN 351
               + N GG+G   G G G     T  S +G        +PSG     + SA    S  
Sbjct: 489 SGLGSSNLGGFGTSSGFGCG----TTGASTFGFGTT---DKPSG-----SLSAGFGSSST 536

Query: 352 SGSNFSVPGVNLGFSPMQFG-GFPSMANFG 380
           SG NFS PG+    + + FG   P+ A FG
Sbjct: 537 SGFNFSNPGITAS-AGLTFGVSNPASAGFG 565


>NUP1_MOUSE (Q8R332) Nucleoporin p58/p45 (Nucleoporin-like protein
           1)
          Length = 587

 Score = 49.3 bits (116), Expect = 9e-05
 Identities = 46/150 (30%), Positives = 62/150 (40%), Gaps = 20/150 (13%)

Query: 238 QNSPSSSTAPAPPPPQAMWTQPAPAPSSTMAQPPATSVAPS------QPVDTAVDSGYGN 291
           QN+P  +T P P          A A + T  Q PAT   PS       P  + + +G  +
Sbjct: 431 QNAPRVTTGPTPFSTMPNAAAVAMAATLTQQQQPATGPQPSLGVSFGTPFGSGIGTGLQS 490

Query: 292 RDEQNRNSGGYGRGRGRGRGRNVQCTYCSKWGHDAASCWSRPSGVSSNANSSANSAQSGN 351
               + N GG+G   G G G     T  S +G        +PSG     + SA    S  
Sbjct: 491 SGLGSSNLGGFGTSSGFGCG----TTGASTFGFGTT---DKPSG-----SLSAGFGSSST 538

Query: 352 SGSNFSVPGVNLGFSPMQFG-GFPSMANFG 380
           SG NFS PG+    + + FG   P+ A FG
Sbjct: 539 SGFNFSNPGITAS-AGLTFGVSNPASAGFG 567


>HORN_MOUSE (Q8VHD8) Hornerin
          Length = 2496

 Score = 49.3 bits (116), Expect = 9e-05
 Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 7/133 (5%)

Query: 264 SSTMAQPPATSVAPSQPVDTAVDSGYGNRDEQNRNSGGYGRGRGRGRGRNVQCTYCSKWG 323
           SST ++  +TS   S    T+   G G+      + GG G+GR    G+    +  ++  
Sbjct: 428 SSTQSRGRSTSRESS----TSQQFGSGSGRSSGFSQGGSGQGRSSRGGQQGSFSGQTEGS 483

Query: 324 HDAASCWSRPSGVSSNANSSANSAQSGNSGSNFSVPGVNLGFSPMQFGGFPSMANFGFPP 383
               SC  + SG   N   S +SA SG  GS++S    +  +     GG PS +  G   
Sbjct: 484 QQHGSCCGQSSGYGQNEYGSGHSASSGQQGSHYS---QSSSYGTHNSGGSPSSSQRGHGS 540

Query: 384 YAPYNSMLPQYGS 396
            +  +S L QYGS
Sbjct: 541 RSGRSSGLGQYGS 553



 Score = 45.8 bits (107), Expect = 0.001
 Identities = 38/133 (28%), Positives = 58/133 (43%), Gaps = 7/133 (5%)

Query: 264  SSTMAQPPATSVAPSQPVDTAVDSGYGNRDEQNRNSGGYGRGRGRGRGRNVQCTYCSKWG 323
            SST ++  +TS   S    T+   G G+      + G  G+GR    G+    +  ++  
Sbjct: 1821 SSTQSRGRSTSRESS----TSQRFGSGSGGSSGFSQGRSGQGRSSRGGQQGSFSGQTEGS 1876

Query: 324  HDAASCWSRPSGVSSNANSSANSAQSGNSGSNFSVPGVNLGFSPMQFGGFPSMANFGFPP 383
                SC  + SG   N   S +SA SG  GS++S    +  +     GG PS +  G   
Sbjct: 1877 QQHGSCCGQSSGYGQNEYGSGHSASSGQQGSHYS---QSSSYGTHNSGGSPSSSQRGHGS 1933

Query: 384  YAPYNSMLPQYGS 396
             +  +S L QYGS
Sbjct: 1934 RSGRSSGLGQYGS 1946



 Score = 45.8 bits (107), Expect = 0.001
 Identities = 38/133 (28%), Positives = 58/133 (43%), Gaps = 7/133 (5%)

Query: 264  SSTMAQPPATSVAPSQPVDTAVDSGYGNRDEQNRNSGGYGRGRGRGRGRNVQCTYCSKWG 323
            SST ++  +TS   S    T+   G G+      + G  G+GR    G+    +  ++  
Sbjct: 1473 SSTQSRGRSTSRESS----TSQRFGSGSGGSSGFSQGRSGQGRSSRGGQQGSFSGQTEGS 1528

Query: 324  HDAASCWSRPSGVSSNANSSANSAQSGNSGSNFSVPGVNLGFSPMQFGGFPSMANFGFPP 383
                SC  + SG   N   S +SA SG  GS++S    +  +     GG PS +  G   
Sbjct: 1529 QQHGSCCGQSSGYGQNEYGSGHSASSGQQGSHYS---QSSSYGTHNSGGSPSSSQRGHGS 1585

Query: 384  YAPYNSMLPQYGS 396
             +  +S L QYGS
Sbjct: 1586 RSGRSSGLGQYGS 1598



 Score = 45.8 bits (107), Expect = 0.001
 Identities = 38/133 (28%), Positives = 58/133 (43%), Gaps = 7/133 (5%)

Query: 264  SSTMAQPPATSVAPSQPVDTAVDSGYGNRDEQNRNSGGYGRGRGRGRGRNVQCTYCSKWG 323
            SST ++  +TS   S    T+   G G+      + G  G+GR    G+    +  ++  
Sbjct: 1125 SSTQSRGRSTSRESS----TSQRFGSGSGGSSGFSQGRSGQGRSSRGGQQGSFSGQTEGS 1180

Query: 324  HDAASCWSRPSGVSSNANSSANSAQSGNSGSNFSVPGVNLGFSPMQFGGFPSMANFGFPP 383
                SC  + SG   N   S +SA SG  GS++S    +  +     GG PS +  G   
Sbjct: 1181 QQHGSCCGQSSGYGQNEYGSGHSASSGQQGSHYS---QSSSYGTHNSGGSPSSSQRGHGS 1237

Query: 384  YAPYNSMLPQYGS 396
             +  +S L QYGS
Sbjct: 1238 RSGRSSGLGQYGS 1250



 Score = 40.0 bits (92), Expect = 0.052
 Identities = 38/134 (28%), Positives = 57/134 (42%), Gaps = 8/134 (5%)

Query: 264 SSTMAQPPATSVAPSQPVDTAVDSGYGNRDEQNRNSGGYGRGRGRGRGRNVQCTYCSKWG 323
           SST ++  +TS   S    T+   G G+      + G  G+GR    G+    +  ++  
Sbjct: 776 SSTQSRGRSTSRESS----TSQRFGSGSGGSSGFSQGRSGQGRSSRGGQQGSFSGQTEGS 831

Query: 324 HDAASCWSRPSGVSSNANSSANSAQSGNSGSNFSVPGVNLGFSPMQFGGFPSMANF-GFP 382
               SC  + SG   N   S +SA SG  GS++S    +  +     GG PS     G  
Sbjct: 832 QQHGSCCGQSSGYGQNEYGSGHSASSGQQGSHYS---QSSSYGTHNSGGSPSSRPAGGHG 888

Query: 383 PYAPYNSMLPQYGS 396
             +  +S L QYGS
Sbjct: 889 SRSGRSSGLGQYGS 902



 Score = 33.1 bits (74), Expect = 6.3
 Identities = 44/167 (26%), Positives = 60/167 (35%), Gaps = 27/167 (16%)

Query: 289  YGNRDEQNRNSGGYGRGRGRGRGRNVQCTYCSKWGHDAASCWSRPSGVSSNANSSANSAQ 348
            YG +   +RNS    RGR   R  +    Y S  G          SG S   +    S++
Sbjct: 2159 YGEQGSGSRNSSTQSRGRSTSRESSTSQRYGSGSGES--------SGFSQGGSGQGRSSR 2210

Query: 349  SGNSGSNFSVPGVNLGFSPMQFGGFPSMANFGFPPYAPYNSMLPQYGSSVLSPSSMPPWS 408
             G  GS FS  G   G S  Q G      +  FP      S      SS    S     S
Sbjct: 2211 GGQQGS-FS--GQTSGRSQHQSGSRHGSGSGQFPISGQQGSHHGHSSSSGTHNSGSSQSS 2267

Query: 409  PWCIPPTPYSHATDMQGMQAAGMSFVRPWLPQGQFPAPTAQTPQFPR 455
                  T +SH +  +  Q++G+         GQ+ +P+ QT    R
Sbjct: 2268 -----STQWSHGSGSE--QSSGL---------GQYGSPSGQTSSSTR 2298


>OSA_DROME (Q8IN94) Trithorax group protein OSA (Eyelid protein)
          Length = 2716

 Score = 48.9 bits (115), Expect = 1e-04
 Identities = 67/296 (22%), Positives = 98/296 (32%), Gaps = 49/296 (16%)

Query: 235 AQAQNSPSSSTAPAPPPPQAMWTQPAPAPSSTMAQPPATSVAPSQPVDTAVDSGYGNRDE 294
           + A NSP  +  PAPPP Q M     P P      PP  +     P+   +  GY     
Sbjct: 587 SSASNSPQQTPPPAPPPNQGMNNMATPPP------PPQGAAGGGYPMPPHMHGGY----- 635

Query: 295 QNRNSGGYGRGRGRGRGRNVQCTYCSKWGHDAASCWSRPSGVSSNANSSANSAQSGNSGS 354
                GG G+  G       Q        +     +  P G  +       ++Q+G  G+
Sbjct: 636 ---KMGGPGQSPGAQGYPPQQPQQYPPGNYPPRPQY--PPGAYATGPPPPPTSQAGAGGA 690

Query: 355 NFSVPGVNLGFSPMQFGGFPSMANFGFPPY--------------APYNSMLPQY--GSSV 398
           N    G   G  P +  G P+     +PPY              AP  +M+  +  G   
Sbjct: 691 NSMPSGAQAGGYPGR--GMPNHTG-QYPPYQWVPPSPQQTVPGGAPGGAMVGNHVQGKGT 747

Query: 399 LSPSSM--PPWSPWCIPPTPYSHATD-MQGMQAAGMSFVRPWLPQGQFPAPTAQTPQFPR 455
             P  +  PP       P P ++    +Q     G S   P  PQG    PT   P  P 
Sbjct: 748 PPPPVVGGPPPPQGSGSPRPLNYLKQHLQHKGGYGGSPTPPQGPQGYGNGPTGMHPGMPM 807

Query: 456 PPQQQVS-----------TGMHPQAMLATVPAHHSSPVTWCPDSGATHHVTNNPGI 500
            P   +            T   PQ+ +           +  P+SG   H++ + GI
Sbjct: 808 GPPHHMGPPHGPTNMGPPTSTPPQSQMLQGGQPQGQGASGGPESGGPEHISQDNGI 863



 Score = 41.6 bits (96), Expect = 0.018
 Identities = 66/255 (25%), Positives = 88/255 (33%), Gaps = 46/255 (18%)

Query: 249 PPPPQAMWTQPAPAPSSTMAQPPATSVAPSQPVDTAVDSGYGNRDEQNRNSGGYGRGRGR 308
           PPPP    +   P PSS+    P+ S  PSQ   +      G ++  + +SGG   G G 
Sbjct: 441 PPPPHV--SAGGPPPSSSPGHAPSPSPQPSQASPSPHQELIG-QNSNDSSSGGAHSGMGS 497

Query: 309 G-----RGRNVQCTYCSKWGHDAASCWSRPSGVSSNANSSANSAQSGNSGSNFSVPGVNL 363
           G       + V     S  G   +   S    V+ N   S  ++   +SG     P V  
Sbjct: 498 GPPGTPNPQQVMRPTPSPTGSSGSR--SMSPAVAQNHPISRPASNQSSSGGPMQQPPVGA 555

Query: 364 GFSPMQFGGFPSMANFGFP--PYAPYNSMLPQYGSSVLSPSSMPPWSPWCIPPTPYSHAT 421
           G  P      P   + G P  P     S   Q  +S  S S+ P  +P   PP P  +  
Sbjct: 556 GGPP------PMPPHPGMPGGPPQQQQSQQQQASNSASSASNSPQQTP---PPAPPPN-- 604

Query: 422 DMQGMQ-----------AAGMSFVRP--------WLPQGQFPAPTAQTPQFPR--PPQQQ 460
             QGM            AAG  +  P            GQ P      PQ P+  PP   
Sbjct: 605 --QGMNNMATPPPPPQGAAGGGYPMPPHMHGGYKMGGPGQSPGAQGYPPQQPQQYPPGNY 662

Query: 461 VSTGMHPQAMLATVP 475
                +P    AT P
Sbjct: 663 PPRPQYPPGAYATGP 677



 Score = 36.6 bits (83), Expect = 0.57
 Identities = 60/244 (24%), Positives = 74/244 (29%), Gaps = 55/244 (22%)

Query: 247  PAPPPPQAMWTQPA--PAPSSTMAQPPA--------TSVAPSQPVDTAVDSGYGNRDEQN 296
            P PPPPQ    Q    P PS     PPA           +P Q V  A  + Y       
Sbjct: 1290 PGPPPPQQQQGQQGQQPPPSVGGGPPPAPQQHGPGQVPPSPQQHVRPAAGAPY------- 1342

Query: 297  RNSGGYGRGRGRGRGRNVQCTYCSKWGHDAASCWSRPSGVSSNANSSANSAQSGNSGSNF 356
               GG G              Y +       S +    G      SS     +G      
Sbjct: 1343 -PPGGSG--------------YPTPVSRTPGSPYPSQPGAYGQYGSSDQYNATG------ 1381

Query: 357  SVPGVNLGFSPMQFGGFPSMANFGFPPYAPYNSMLP----QYGSSVLSPSSMPPWSPWCI 412
              PG   G  P   G +P      +PPY P     P    QYG     P S PP      
Sbjct: 1382 -PPGQPFGQGP---GQYPPQNRNMYPPYGPEGEAPPTGANQYGPYGSRPYSQPP------ 1431

Query: 413  PPTPYSHATDMQGMQAAGMSFVRPWLPQGQFP-APTAQTPQFPRPPQQQVSTGMHPQAML 471
            P  P      + G   AG +   P  P   +P    +Q   +  PP Q      HP  + 
Sbjct: 1432 PGGPQPPTQTVAGGPPAGGAPGAP--PSSAYPTGRPSQQDYYQPPPDQSPQPRRHPDFIK 1489

Query: 472  ATVP 475
             + P
Sbjct: 1490 DSQP 1493



 Score = 35.0 bits (79), Expect = 1.7
 Identities = 51/224 (22%), Positives = 73/224 (31%), Gaps = 40/224 (17%)

Query: 241  PSSSTAPAPPPPQAMWTQPAPAPSSTMAQPPATSVAPSQPVDTAVDSGYGNRDEQNRNSG 300
            P  +TA     P +      P P +  A     +++ S P +  + +G G          
Sbjct: 1175 PDYATAGQMQRPPSQNNPQTPHPGAAAAVAAGDNISVSNPFEDPIAAGGG-------PGS 1227

Query: 301  GYGRGRGRGRGRNVQCTYCSKWGHDAASCWSRPSGVSSNANSSANSA-QSGNSGSNFSVP 359
            G G G G+G G           G         P    S   ++  +A Q          P
Sbjct: 1228 GTGPGPGQGPGPGAASGGAGAVGAVGGGPQPHPPPPHSPHTAAQQAAGQHQQQHPQHQHP 1287

Query: 360  GVNLGFSPM----QFGGFPSMANFGFPPYAPYNSMLPQYGSSVLSPSSMPPWSPWCIPPT 415
            G+     P     Q G  P  +  G PP AP      Q+G             P  +PP+
Sbjct: 1288 GLPGPPPPQQQQGQQGQQPPPSVGGGPPPAP-----QQHG-------------PGQVPPS 1329

Query: 416  PYSHATDMQGMQAAGMSFVRPWLPQGQ-FPAPTAQTPQFPRPPQ 458
            P  H     G          P+ P G  +P P ++TP  P P Q
Sbjct: 1330 PQQHVRPAAG---------APYPPGGSGYPTPVSRTPGSPYPSQ 1364



 Score = 33.9 bits (76), Expect = 3.7
 Identities = 33/100 (33%), Positives = 42/100 (42%), Gaps = 19/100 (19%)

Query: 964  PYPILFPT---------DHSSSSSAEFYPLSTIPIISHTAPPSSPVLAASGHSSP--GPQ 1012
            PYP  +PT         +H ++ S   YP    P    ++P  SP    SGH  P   P 
Sbjct: 377  PYPQRYPTPPGLPAGGSNHRTAYSTHQYPEPNRPWPGGSSP--SP---GSGHPLPPASPH 431

Query: 1013 DSP--QQQQPPSATLSA-DDPSTSTPAVVSPPVPSSSAQS 1049
              P  QQQ PP   +SA   P +S+P     P P  S  S
Sbjct: 432  HVPPLQQQPPPPPHVSAGGPPPSSSPGHAPSPSPQPSQAS 471



 Score = 33.5 bits (75), Expect = 4.9
 Identities = 25/77 (32%), Positives = 34/77 (43%), Gaps = 5/77 (6%)

Query: 965  YPILFPTDHSSSSSAEFYPLSTIPIISHTAPPSSPVLAASGHSSPGPQDSPQQQQPPSAT 1024
            +PI  P  + SSS     P+   P+ +   PP  P     G   P  Q S QQQ   SA+
Sbjct: 532  HPISRPASNQSSSGG---PMQQPPVGAGGPPPMPPHPGMPG-GPPQQQQSQQQQASNSAS 587

Query: 1025 LSADDPSTSTPAVVSPP 1041
             +++ P   TP    PP
Sbjct: 588  SASNSPQ-QTPPPAPPP 603


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.317    0.131    0.397 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 193,650,890
Number of Sequences: 164201
Number of extensions: 8682161
Number of successful extensions: 49603
Number of sequences better than 10.0: 515
Number of HSP's better than 10.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 435
Number of HSP's that attempted gapping in prelim test: 41132
Number of HSP's gapped (non-prelim): 5900
length of query: 1611
length of database: 59,974,054
effective HSP length: 124
effective length of query: 1487
effective length of database: 39,613,130
effective search space: 58904724310
effective search space used: 58904724310
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 73 (32.7 bits)


Lotus: description of TM0320a.8