BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0320a.8
(1611 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
POLX_TOBAC (P10978) Retrovirus-related Pol polyprotein from tran... 496 e-139
COPI_DROME (P04146) Copia protein (Gag-int-pol protein) [Contain... 338 9e-92
M810_ARATH (P92519) Hypothetical mitochondrial protein AtMg00810... 219 4e-56
YCH4_YEAST (P25600) Transposon Ty5-1 34.5 kDa hypothetical protein 173 4e-42
YJL3_YEAST (P47024) Transposon Ty4 207.7 kDa hypothetical protein 132 6e-30
YMD9_YEAST (Q03434) Transposon Ty1 protein B 120 4e-26
YMU0_YEAST (Q04670) Transposon Ty1 protein B 118 1e-25
YME4_YEAST (Q04711) Transposon Ty1 protein B 118 1e-25
YJZ9_YEAST (P47100) Transposon Ty1 protein B 117 3e-25
M820_ARATH (P92520) Hypothetical mitochondrial protein AtMg00820... 116 4e-25
YJZ7_YEAST (P47098) Transposon Ty1 protein B 116 6e-25
YCB9_YEAST (P25384) Transposon Ty2 protein B (Ty1-17 protein B) 115 7e-25
YMT5_YEAST (Q04214) Transposon Ty1 protein B 114 3e-24
M240_ARATH (P93290) Hypothetical mitochondrial protein AtMg00240... 74 4e-12
TNK1_HUMAN (O95271) Tankyrase 1 (EC 2.4.2.30) (TANK1) (Tankyrase... 54 3e-06
POL_FOAMV (P14350) Pol polyprotein [Contains: Reverse transcript... 50 7e-05
NUP1_RAT (P70581) Nucleoporin p58/p45 (Nucleoporin-like protein 1) 49 9e-05
NUP1_MOUSE (Q8R332) Nucleoporin p58/p45 (Nucleoporin-like protei... 49 9e-05
HORN_MOUSE (Q8VHD8) Hornerin 49 9e-05
OSA_DROME (Q8IN94) Trithorax group protein OSA (Eyelid protein) 49 1e-04
>POLX_TOBAC (P10978) Retrovirus-related Pol polyprotein from
transposon TNT 1-94 [Contains: Protease (EC 3.4.23.-);
Reverse transcriptase (EC 2.7.7.49); Endonuclease]
Length = 1328
Score = 496 bits (1278), Expect = e-139
Identities = 330/936 (35%), Positives = 472/936 (50%), Gaps = 56/936 (5%)
Query: 679 DLWHSRLGHPHHDVLKQTLSLCNISVPSNKSVFSFCKACCLSKLHRLPSSSSNTVYNTPF 738
DLWH R+GH L+ IS +V C C K HR+ +S+
Sbjct: 423 DLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKP-CDYCLFGKQHRVSFQTSSERKLNIL 481
Query: 739 ELVFADLWGPASLESSCGFLYFLTCVDACTKYTWVFPLKKKSDTCATFINFQAMVELQFG 798
+LV++D+ GP +ES G YF+T +D ++ WV+ LK K F F A+VE + G
Sbjct: 482 DLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETG 541
Query: 799 HKLKSVQTDGGGEF--KPLTSHFQKLGIIHRLTCPHTHHQNGSVERKHRHIVETGLALLS 856
KLK +++D GGE+ + + GI H T P T NG ER +R IVE ++L
Sbjct: 542 RKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLR 601
Query: 857 HASMPLQFWDHAFLAATYLINRMSTTTLQGASPYFKLYGQYPDFKSLKVFGSACFPFLRP 916
A +P FW A A YLINR + L P + + LKVFG F +
Sbjct: 602 MAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPK 661
Query: 917 YNSNKLSLHSKECVFIGYSINHKGYKCLDQ-SGRIYISKDVLFHEHRFPYPILFPTDHSS 975
KL S C+FIGY GY+ D ++ S+DV+F E + D S
Sbjct: 662 EQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESE----VRTAADMSE 717
Query: 976 SSSAEFYP-LSTIPIISHTAPPSSPVLAASGHSSPGPQDSPQQQQPPSATLSADDPSTST 1034
P TIP S+ P S+ S + S Q +QP +
Sbjct: 718 KVKNGIIPNFVTIPSTSNN-PTSA--------ESTTDEVSEQGEQPGEVIEQGEQLDEGV 768
Query: 1035 PAVVSPPVPSSSAQSADTSASVVAAAPPVIVNTHPMQTRAKNGIVKPRLQPTLLLTHLEP 1094
V P Q P+ + P + P + L+ EP
Sbjct: 769 EEVEHPTQGEEQHQ-------------PLRRSERPRVESRR----YPSTEYVLISDDREP 811
Query: 1095 TSVKQAM---KDAKWYKAMQEEYTALMNNGTWTLVPLPANRTPVGCKWIYRIKENPDGSI 1151
S+K+ + + + KAMQEE +L NGT+ LV LP + P+ CKW++++K++ D +
Sbjct: 812 ESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKL 871
Query: 1152 NKYKARLVAKGYSQVQGFDYSETFSPVVKPITVRLILSLAISRGWPLQQLDVNNAFLNGV 1211
+YKARLV KG+ Q +G D+ E FSPVVK ++R ILSLA S ++QLDV AFL+G
Sbjct: 872 VRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGD 931
Query: 1212 LEEEVYMVQPPGFE-HKDKNLVCKLQKALYGLKQAPRAWFHRLKEVLIRFGFQASKCDPS 1270
LEEE+YM QP GFE K++VCKL K+LYGLKQAPR W+ + + + + DP
Sbjct: 932 LEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPC 991
Query: 1271 L-FTYYSSQGCIYMLVYVDDIIITGASMSLIQQLTAQLHSIFALKQLGQLDYFLGVQ-VT 1328
+ F +S I +L+YVDD++I G LI +L L F +K LG LG++ V
Sbjct: 992 VYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVR 1051
Query: 1329 HLSNGNLLLNQTKYISDLLTKVNMLDAAAISTPMQCGVKLSK--------NEGSALKDPT 1380
++ L L+Q KYI +L + NM +A +STP+ +KLSK +G+ K P
Sbjct: 1052 ERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVP- 1110
Query: 1381 EYRSVVGALQYATI-TRPEISFAVNKVCQFMAQPHEEHWKAVKRILRYLKGTLTHGILLQ 1439
Y S VG+L YA + TRP+I+ AV V +F+ P +EHW+AVK ILRYL+GT +
Sbjct: 1111 -YSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCL--- 1166
Query: 1440 PCSMTRPLPLIAYCDADWGSDPDDRRSTSGSCVFLGYNLISWTAKKQSLVARSSTEAEYR 1499
C L Y DAD D D+R+S++G ISW +K Q VA S+TEAEY
Sbjct: 1167 -CFGGSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYI 1225
Query: 1500 SLANTTAELLWVQSLLTELKIPFTIPTVYCDNMSTVLLTHNPILHTRTKHMEMDIFFVRE 1559
+ T E++W++ L EL + VYCD+ S + L+ N + H RTKH+++ ++RE
Sbjct: 1226 AATETGKEMIWLKRFLQELGLHQKEYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIRE 1285
Query: 1560 KVQDKSLLVQHVPSEHQKADIFTKALSPTRFLLLKD 1595
V D+SL V + + AD+ TK + +F L K+
Sbjct: 1286 MVDDESLKVLKISTNENPADMLTKVVPRNKFELCKE 1321
Score = 47.4 bits (111), Expect = 3e-04
Identities = 39/193 (20%), Positives = 81/193 (41%), Gaps = 20/193 (10%)
Query: 33 DSNFYSWKQQVEGVIRSHKLQKFVQDPPMIPEKFLTEEDKITENVNPLFADWEQQDSLLF 92
D+ F +W++++ ++ L K + P+ E DW D
Sbjct: 14 DNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAE-------------DWADLDERAA 60
Query: 93 TWLLSTLSPAILPNVIQCVHSYQVWEEIHSFFNAKSRAQSTQLRNEL--KNITKGTKTAS 150
+ + LS ++ N+I + +W + S + +K+ L+ +L ++++GT S
Sbjct: 61 SAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLS 120
Query: 151 EFLQRIKTIVNTLASIGEPVTFRDHLEAIFDGLSEEYSALMTVIYNQTTYFTISEVEAMV 210
L ++ LA++G + D + + L Y L T I + T + +V + +
Sbjct: 121 H-LNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIELKDVTSAL 179
Query: 211 ISHEARFDRMRKK 223
+ +E +MRKK
Sbjct: 180 LLNE----KMRKK 188
Score = 36.6 bits (83), Expect = 0.57
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Query: 477 HHSSPVT-WCPDSGATHHVTNNPGIFVDHVPSSSQEQLLVGNGQGLPIQSIGSALLPSSF 535
H S P + W D+ A+HH T +F +V + + +GN I IG + +
Sbjct: 286 HLSGPESEWVVDTAASHHATPVRDLFCRYV-AGDFGTVKMGNTSYSKIAGIGDICIKT-- 342
Query: 536 NPTASLILKKLLLVPSITKNLVSVSRFARDNNVFFSFHAN 575
N +L+LK + VP + NL +S A D + + S+ AN
Sbjct: 343 NVGCTLVLKDVRHVPDLRMNL--ISGIALDRDGYESYFAN 380
>COPI_DROME (P04146) Copia protein (Gag-int-pol protein) [Contains:
Copia VLP protein; Copia protease (EC 3.4.23.-)]
Length = 1409
Score = 338 bits (866), Expect = 9e-92
Identities = 186/505 (36%), Positives = 291/505 (56%), Gaps = 15/505 (2%)
Query: 1104 AKWYKAMQEEYTALMNNGTWTLVPLPANRTPVGCKWIYRIKENPDGSINKYKARLVAKGY 1163
+ W +A+ E A N TWT+ P N+ V +W++ +K N G+ +YKARLVA+G+
Sbjct: 904 SSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGF 963
Query: 1164 SQVQGFDYSETFSPVVKPITVRLILSLAISRGWPLQQLDVNNAFLNGVLEEEVYMVQPPG 1223
+Q DY ETF+PV + + R ILSL I + Q+DV AFLNG L+EE+YM P G
Sbjct: 964 TQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQG 1023
Query: 1224 FEHKDKNLVCKLQKALYGLKQAPRAWFHRLKEVLIRFGFQASKCDPSLFTYYSS--QGCI 1281
N VCKL KA+YGLKQA R WF ++ L F S D ++ I
Sbjct: 1024 ISCNSDN-VCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENI 1082
Query: 1282 YMLVYVDDIIITGASMSLIQQLTAQLHSIFALKQLGQLDYFLGVQVTHLSNGNLLLNQTK 1341
Y+L+YVDD++I M+ + L F + L ++ +F+G+++ + + L+Q+
Sbjct: 1083 YVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRI-EMQEDKIYLSQSA 1141
Query: 1342 YISDLLTKVNMLDAAAISTPMQCGVK---LSKNEGSALKDPTEYRSVVGALQYATI-TRP 1397
Y+ +L+K NM + A+STP+ + L+ +E T RS++G L Y + TRP
Sbjct: 1142 YVKKILSKFNMENCNAVSTPLPSKINYELLNSDEDC----NTPCRSLIGCLMYIMLCTRP 1197
Query: 1398 EISFAVNKVCQFMAQPHEEHWKAVKRILRYLKGTLTHGILLQPCSMTRPLPLIAYCDADW 1457
+++ AVN + ++ ++ + E W+ +KR+LRYLKGT+ ++ + ++ +I Y D+DW
Sbjct: 1198 DLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKK-NLAFENKIIGYVDSDW 1256
Query: 1458 GSDPDDRRSTSGSCV-FLGYNLISWTAKKQSLVARSSTEAEYRSLANTTAELLWVQSLLT 1516
DR+ST+G +NLI W K+Q+ VA SSTEAEY +L E LW++ LLT
Sbjct: 1257 AGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLT 1316
Query: 1517 ELKIPFTIP-TVYCDNMSTVLLTHNPILHTRTKHMEMDIFFVREKVQDKSLLVQHVPSEH 1575
+ I P +Y DN + + +NP H R KH+++ F RE+VQ+ + ++++P+E+
Sbjct: 1317 SINIKLENPIKIYEDNQGCISIANNPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPTEN 1376
Query: 1576 QKADIFTKALSPTRFLLLKDKLNVV 1600
Q ADIFTK L RF+ L+DKL ++
Sbjct: 1377 QLADIFTKPLPAARFVELRDKLGLL 1401
Score = 117 bits (292), Expect = 3e-25
Identities = 91/297 (30%), Positives = 138/297 (45%), Gaps = 20/297 (6%)
Query: 678 YDLWHSRLGHPHHDVLKQTLSLCNISVPSNKSVFS-------FCKACCLSKLHRLPSSS- 729
+ LWH R GH L L + ++ S++S+ + C+ C K RLP
Sbjct: 415 FRLWHERFGHISDGKL---LEIKRKNMFSDQSLLNNLELSCEICEPCLNGKQARLPFKQL 471
Query: 730 -SNTVYNTPFELVFADLWGPASLESSCGFLYFLTCVDACTKYTWVFPLKKKSDTCATFIN 788
T P +V +D+ GP + + YF+ VD T Y + +K KSD + F +
Sbjct: 472 KDKTHIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQD 531
Query: 789 FQAMVELQFGHKLKSVQTDGGGEF--KPLTSHFQKLGIIHRLTCPHTHHQNGSVERKHRH 846
F A E F K+ + D G E+ + K GI + LT PHT NG ER R
Sbjct: 532 FVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRT 591
Query: 847 IVETGLALLSHASMPLQFWDHAFLAATYLINRMSTTTLQGAS--PYFKLYGQYPDFKSLK 904
I E ++S A + FW A L ATYLINR+ + L +S PY + + P K L+
Sbjct: 592 ITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPYLKHLR 651
Query: 905 VFGSACFPFLRPYNSNKLSLHSKECVFIGYSINHKGYKCLDQ-SGRIYISKDVLFHE 960
VFG+ + ++ K S + +F+GY N G+K D + + +++DV+ E
Sbjct: 652 VFGATVYVHIK-NKQGKFDDKSFKSIFVGYEPN--GFKLWDAVNEKFIVARDVVVDE 705
>M810_ARATH (P92519) Hypothetical mitochondrial protein AtMg00810
(ORF240b)
Length = 240
Score = 219 bits (559), Expect = 4e-56
Identities = 116/232 (50%), Positives = 161/232 (69%), Gaps = 9/232 (3%)
Query: 1281 IYMLVYVDDIIITGASMSLIQQLTAQLHSIFALKQLGQLDYFLGVQV-THLSNGNLLLNQ 1339
+Y+L+YVDDI++TG+S +L+ L QL S F++K LG + YFLG+Q+ TH S L L+Q
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQ 58
Query: 1340 TKYISDLLTKVNMLDAAAISTPMQCGVKLSKNEGSA-LKDPTEYRSVVGALQYATITRPE 1398
TKY +L MLD +STP+ +KL+ + +A DP+++RS+VGALQY T+TRP+
Sbjct: 59 TKYAEQILNNAGMLDCKPMSTPLP--LKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPD 116
Query: 1399 ISFAVNKVCQFMAQPHEEHWKAVKRILRYLKGTLTHGILLQPCSMTRPLPLIAYCDADWG 1458
IS+AVN VCQ M +P + +KR+LRY+KGT+ HG+ + S L + A+CD+DW
Sbjct: 117 ISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSK---LNVQAFCDSDWA 173
Query: 1459 SDPDDRRSTSGSCVFLGYNLISWTAKKQSLVARSSTEAEYRSLANTTAELLW 1510
RRST+G C FLG N+ISW+AK+Q V+RSSTE EYR+LA T AEL W
Sbjct: 174 GCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>YCH4_YEAST (P25600) Transposon Ty5-1 34.5 kDa hypothetical protein
Length = 308
Score = 173 bits (438), Expect = 4e-42
Identities = 100/311 (32%), Positives = 172/311 (55%), Gaps = 6/311 (1%)
Query: 1201 LDVNNAFLNGVLEEEVYMVQPPGF-EHKDKNLVCKLQKALYGLKQAPRAWFHRLKEVLIR 1259
+DV+ AFLN ++E +Y+ QPPGF ++ + V +L +YGLKQAP W + L +
Sbjct: 1 MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60
Query: 1260 FGFQASKCDPSLFTYYSSQGCIYMLVYVDDIIITGASMSLIQQLTAQLHSIFALKQLGQL 1319
GF + + L+ +S G IY+ VYVDD+++ S + ++ +L ++++K LG++
Sbjct: 61 IGFCRHEGEHGLYFRSTSDGPIYIGVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120
Query: 1320 DYFLGVQVTHLSNGNLLLNQTKYISDLLTKVNMLDAAAISTPMQCGVKLSKNEGSALKDP 1379
D FLG+ + +NG++ L+ YI+ ++ + TP+ L + LKD
Sbjct: 121 DKFLGLNIHQSTNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHLKDI 180
Query: 1380 TEYRSVVGALQYATIT-RPEISFAVNKVCQFMAQPHEEHWKAVKRILRYLKGTLTHGILL 1438
T Y+S+VG L + T RP+IS+ V+ + +F+ +P H ++ +R+LRYL T + +
Sbjct: 181 TPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTTRSMCLKY 240
Query: 1439 QPCSMTRPLPLIAYCDADWGSDPDDRRSTSGSCVFLGYNLISWTAKK-QSLVARSSTEAE 1497
+ S + L YCDA G+ D ST G L ++W++KK + ++ STEAE
Sbjct: 241 RSGSQ---VALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPSTEAE 297
Query: 1498 YRSLANTTAEL 1508
Y + + T E+
Sbjct: 298 YITASETVMEI 308
>YJL3_YEAST (P47024) Transposon Ty4 207.7 kDa hypothetical protein
Length = 1803
Score = 132 bits (333), Expect = 6e-30
Identities = 127/471 (26%), Positives = 217/471 (45%), Gaps = 34/471 (7%)
Query: 1154 YKARLVAKGYSQVQGFDYSETFSPVVKPITVRLILSLAISRGWPLQQLDVNNAFLNGVLE 1213
YKAR+V +G +Q YS + + +++ L +A +R ++ LD+N+AFL LE
Sbjct: 1337 YKARIVCRGDTQSPD-TYSVITTESLNHNHIKIFLMIANNRNMFMKTLDINHAFLYAKLE 1395
Query: 1214 EEVYMVQPPGFEHKDKNLVCKLQKALYGLKQAPRAWFHRLKEVLIRFGFQASKCDPSLFT 1273
EE+Y+ P D+ V KL KALYGLKQ+P+ W L++ L G + + P L
Sbjct: 1396 EEIYIPHP-----HDRRCVVKLNKALYGLKQSPKEWNDHLRQYLNGIGLKDNSYTPGL-- 1448
Query: 1274 YYSSQGCIYMLVYVDDIIITGASMSLIQQLTAQLHSIFALKQLGQL------DYFLGVQV 1327
Y + + + VYVDD +I ++ + + +L S F LK G L LG+ +
Sbjct: 1449 YQTEDKNLMIAVYVDDCVIAASNEQRLDEFINKLKSNFELKITGTLIDDVLDTDILGMDL 1508
Query: 1328 THLSN-GNLLLNQTKYISDLLTKVN--MLDAAAISTPMQCGVKLSKNEGSALKDPTEYR- 1383
+ G + L +I+ + K N + S P K+ + E+R
Sbjct: 1509 VYNKRLGTIDLTLKSFINRMDKKYNEELKKIRKSSIPHMSTYKIDPKKDVLQMSEEEFRQ 1568
Query: 1384 ------SVVGALQYAT-ITRPEISFAVNKVCQFMAQPHEEHWKAVKRILRYLKGTLTHGI 1436
++G L Y R +I FAV KV + + PHE + + +I++YL GI
Sbjct: 1569 GVLKLQQLLGELNYVRHKCRYDIEFAVKKVARLVNYPHERVFYMIYKIIQYLVRYKDIGI 1628
Query: 1437 LL-QPCSMTRPLPLIAYCDADWGSDPDDRRSTSGSCVFLGYNLISWTAKKQSLVARSSTE 1495
+ C+ + +IA DA GS+ D +S G ++ G N+ + + K + SSTE
Sbjct: 1629 HYDRDCNKDK--KVIAITDASVGSE-YDAQSRIGVILWYGMNIFNVYSNKSTNRCVSSTE 1685
Query: 1496 AEYRSLANTTAELLWVQSLLTELKIPFTIPTV-YCDNMSTVLLTHNPILHTRTKHMEMDI 1554
AE ++ A+ ++ L EL V D+ + + + K +
Sbjct: 1686 AELHAIYEGYADSETLKVTLKELGEGDNNDIVMITDSKPAIQGLNRSYQQPKEKFTWIKT 1745
Query: 1555 FFVREKVQDKSLLVQHVPSEHQKADIFTKALSPTRF----LLLKDKLNVVD 1601
++EK+++KS+ + + + AD+ TK +S + F +LK+K+ D
Sbjct: 1746 EIIKEKIKEKSIKLLKITGKGNIADLLTKPVSASDFKRFIQVLKNKITSQD 1796
Score = 71.2 bits (173), Expect = 2e-11
Identities = 59/212 (27%), Positives = 97/212 (44%), Gaps = 21/212 (9%)
Query: 682 HSRLGHPHHDVLKQTL-------SLCNISVPSNKSVFSFCKACCLSKL----HRLPSSSS 730
H R+GH ++ ++ SL I P+ +C+ C +SK H S ++
Sbjct: 562 HKRMGHTGIQQIENSIKHNHYEESLDLIKEPNE----FWCQTCKISKATKRNHYTGSMNN 617
Query: 731 NTVYNTPFELVFADLWGPASLESSCGFLYFLTCVDACTKYTWVFP-LKKKSDTCATFI-- 787
++ + P D++GP S ++ Y L VD T+Y K ++T +
Sbjct: 618 HSTDHEPGSSWCMDIFGPVSSSNADTKRYMLIMVDNNTRYCMTSTHFNKNAETILAQVRK 677
Query: 788 NFQAMVELQFGHKLKSVQTDGGGEFK--PLTSHFQKLGIIHRLTCPHTHHQNGSVERKHR 845
N Q VE QF K++ + +D G EF + +F GI H LT H NG ER R
Sbjct: 678 NIQ-YVETQFDRKVREINSDRGTEFTNDQIEEYFISKGIHHILTSTQDHAANGRAERYIR 736
Query: 846 HIVETGLALLSHASMPLQFWDHAFLAATYLIN 877
I+ LL +++ ++FW++A +AT + N
Sbjct: 737 TIITDATTLLRQSNLRVKFWEYAVTSATNIRN 768
>YMD9_YEAST (Q03434) Transposon Ty1 protein B
Length = 1328
Score = 120 bits (300), Expect = 4e-26
Identities = 150/685 (21%), Positives = 283/685 (40%), Gaps = 72/685 (10%)
Query: 961 HRFPYPILFPTDHSSSSSAEFYPLSTIPIISHTAPPSSPVLAASGHSSPGPQDSPQQQQP 1020
HR P P +++SS + P+ T +S S + D P P
Sbjct: 664 HRSPSIDASPPENNSSHN--IVPIKTPTTVSEQNTEESIIA-----------DLPLPDLP 710
Query: 1021 PSATLSADDPSTSTPAVVSPPVPSSSAQSADTSA---------SVVAAAPPVIVNTHPMQ 1071
P + DP P + S SS D++A S+ + V+
Sbjct: 711 PESPTEFPDPFKELPPINSHQTNSSLGGIGDSNAYTTINSKKRSLEDNETEIKVSRDTWN 770
Query: 1072 TRAKNGIVKPRLQPTLLLT-------HLEP-----------TSVKQAMKDAKWYKAMQEE 1113
T+ + PR + + L ++P T K + K+ +A +E
Sbjct: 771 TKNMRSLEPPRSKKRIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIKEKEKYIEAYHKE 830
Query: 1114 YTALMNNGTWTLVPLPANRTPVGCKWI----YRIKENPDGSINKYKARLVAKGYSQVQGF 1169
L+ TW +R + K + + + DG+ +KAR VA+G Q
Sbjct: 831 VNQLLKMKTWDTDEY-YDRKEIDPKRVINSMFIFNKKRDGT---HKARFVARGDIQHPDT 886
Query: 1170 DYSETFSPVVKPITVRLILSLAISRGWPLQQLDVNNAFLNGVLEEEVYMVQPPGFEHKDK 1229
S S V + LSLA+ + + QLD+++A+L ++EE+Y+ PP DK
Sbjct: 887 YDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPPHLGMNDK 946
Query: 1230 NLVCKLQKALYGLKQAPRAWFHRLKEVLIRFGFQASKCDPSLFTYYSSQGCIYMLVYVDD 1289
+ +L+K+LYGLKQ+ W+ +K LI+ Q + ++ + + ++VDD
Sbjct: 947 --LIRLKKSLYGLKQSGANWYETIKSYLIK---QCGMEEVRGWSCVFKNSQVTICLFVDD 1001
Query: 1290 IIITGASMSLIQQLTAQLHSIFALK--QLGQLDY-----FLGVQVTHLSNGNLLLNQTKY 1342
+I+ ++ +++ L + K LG+ D LG+++ + + L
Sbjct: 1002 MILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIKYQRGKYMKLGMENS 1061
Query: 1343 ISDLLTKVNM---LDAAAISTPMQCGVKLSKNEGSALKDP-----TEYRSVVGALQYATI 1394
+++ + K+N+ +S P Q G+ + ++E +D E + ++G Y
Sbjct: 1062 LTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQDELEIDEDEYKEKVHEMQKLIGLASYVGY 1121
Query: 1395 T-RPEISFAVNKVCQFMAQPHEEHWKAVKRILRYLKGTLTHGILLQPCSMTRP-LPLIAY 1452
R ++ + +N + Q + P + +++++ T ++ T P L+A
Sbjct: 1122 KFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKNKPTEPDNKLVAI 1181
Query: 1453 CDADWGSDPDDRRSTSGSCVFLGYNLISWTAKKQSLVARSSTEAEYRSLANTTAELLWVQ 1512
DA +G+ P +S G+ L +I + K SL S+TEAE +++ + L +
Sbjct: 1182 SDASYGNQP-YYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAISESVPLLNNLS 1240
Query: 1513 SLLTELKIPFTIPTVYCDNMSTV-LLTHNPILHTRTKHMEMDIFFVREKVQDKSLLVQHV 1571
L+ EL I + D+ ST+ ++ R + +R++V +L V ++
Sbjct: 1241 YLIQELNKKPIIKGLLTDSRSTISIIKSTNEEKFRNRFFGTKAMRLRDEVSGNNLYVYYI 1300
Query: 1572 PSEHQKADIFTKALSPTRFLLLKDK 1596
++ AD+ TK L F LL +K
Sbjct: 1301 ETKKNIADVMTKPLPIKTFKLLTNK 1325
Score = 65.5 bits (158), Expect = 1e-09
Identities = 69/285 (24%), Positives = 113/285 (39%), Gaps = 24/285 (8%)
Query: 658 NVSSTVSDLVSCNSGSGISVYDLWHSRLGHPHHDVLK-----QTLSLCNISVPSNKSVFS 712
N+S + V + + Y H L H + ++ T++ N S S
Sbjct: 148 NISVPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDRSSAID 207
Query: 713 F-CKACCLSKL--HRLPSSSSNTVYNT--PFELVFADLWGPASLESSCGFLYFLTCVDAC 767
+ C C + K HR S N+ PF+ + D++GP YF++ D
Sbjct: 208 YQCPDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDET 267
Query: 768 TKYTWVFPL--KKKSDTCATFINFQAMVELQFGHKLKSVQTDGGGEFKPLTSH--FQKLG 823
TK+ WV+PL +++ F A ++ QF + +Q D G E+ T H +K G
Sbjct: 268 TKFRWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNG 327
Query: 824 IIHRLTCPHTHHQNGSVERKHRHIVETGLALLSHASMPLQFWDHAFLAATYLINRMSTTT 883
I T +G ER +R +++ L + +P W A +T + N +
Sbjct: 328 ITPCYTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSL---- 383
Query: 884 LQGASPYFKLYG-QYPDFKSLKVFGSACFPFLRPYNSNKLSLHSK 927
ASP K Q+ L + S PF +P N + +SK
Sbjct: 384 ---ASPKSKKSARQHAGLAGLDI--STLLPFGQPVIVNDHNPNSK 423
>YMU0_YEAST (Q04670) Transposon Ty1 protein B
Length = 1328
Score = 118 bits (296), Expect = 1e-25
Identities = 149/690 (21%), Positives = 285/690 (40%), Gaps = 82/690 (11%)
Query: 961 HRFPYPILFPTDHSSSSSAEFYPLSTIPIISHTAPPSSPVLAASGHSSPGPQDSPQQQQP 1020
HR P P +++SS + P+ T +S S + D P P
Sbjct: 664 HRSPSIDASPPENNSSHN--IVPIKTPTTVSEQNTEESIIA-----------DLPLPDLP 710
Query: 1021 PSATLSADDPSTSTPAVVSPPVPSSSAQSADTSA---------SVVAAAPPVIVNTHPMQ 1071
P + DP P + S SS D++A S+ + V+
Sbjct: 711 PESPTEFPDPFKELPPINSRQTNSSLGGIGDSNAYTTINSKKRSLEDNETEIKVSRDTWN 770
Query: 1072 TRAKNGIVKPRLQPTLLLT-------HLEP-----------TSVKQAMKDAKWYKAMQEE 1113
T+ + PR + + L ++P T K + K+ +A +E
Sbjct: 771 TKNMRSLEPPRSKKRIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIKEKEKYIQAYHKE 830
Query: 1114 YTALMNNGTWTLVPLPANRTPVGCKWI----YRIKENPDGSINKYKARLVAKGYSQVQGF 1169
L+ TW +R + K + + DG+ +KAR VA+G Q
Sbjct: 831 VNQLLKMKTWD-TDRYYDRKEIDPKRVINSMFIFNRKRDGT---HKARFVARGDIQ---- 882
Query: 1170 DYSETFSPVVKPITVR-----LILSLAISRGWPLQQLDVNNAFLNGVLEEEVYMVQPPGF 1224
+ +T+ P ++ TV LSLA+ + + QLD+++A+L ++EE+Y+ PP
Sbjct: 883 -HPDTYDPGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPPHL 941
Query: 1225 EHKDKNLVCKLQKALYGLKQAPRAWFHRLKEVLIRFGFQASKCDPSLFTYYSSQGCIYML 1284
DK + +L+K+LYGLKQ+ W+ +K LI+ Q + ++ + +
Sbjct: 942 GMNDK--LIRLKKSLYGLKQSGANWYETIKSYLIK---QCGMEEVRGWSCVFKNSQVTIC 996
Query: 1285 VYVDDIIITGASMSLIQQLTAQLHSIFALK--QLGQLDY-----FLGVQVTHLSNGNLLL 1337
++VDD+I+ ++ +++ L + K LG+ D LG+++ + + L
Sbjct: 997 LFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIKYQRGKYMKL 1056
Query: 1338 NQTKYISDLLTKVNM---LDAAAISTPMQCGVKLSKNEGSALKDP-----TEYRSVVGAL 1389
+++ + K+N+ +S P Q G+ + + E +D E + ++G
Sbjct: 1057 GMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQQELELEEDDYKMKVHEMQKLIGLA 1116
Query: 1390 QYATIT-RPEISFAVNKVCQFMAQPHEEHWKAVKRILRYLKGTLTHGILLQPCSMTRPL- 1447
Y R ++ + +N + Q + P ++ +++++ T ++ +P
Sbjct: 1117 SYVGYKFRFDLLYYINTLAQHILFPSKQVLDMTYELIQFIWNTRDKQLIWHKSKPVKPTN 1176
Query: 1448 PLIAYCDADWGSDPDDRRSTSGSCVFLGYNLISWTAKKQSLVARSSTEAEYRSLANTTAE 1507
L+ DA +G+ P +S G+ L +I + K SL S+TEAE +++ +
Sbjct: 1177 KLVVISDASYGNQP-YYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAISESVPL 1235
Query: 1508 LLWVQSLLTELKIPFTIPTVYCDNMSTV-LLTHNPILHTRTKHMEMDIFFVREKVQDKSL 1566
L + L+ EL + D+ ST+ ++ N R + +R++V L
Sbjct: 1236 LNNLSHLVQELNKKPITKGLLTDSKSTISIIISNNEEKFRNRFFGTKAMRLRDEVSGNHL 1295
Query: 1567 LVQHVPSEHQKADIFTKALSPTRFLLLKDK 1596
V ++ ++ AD+ TK L F LL +K
Sbjct: 1296 HVCYIETKKNIADVMTKPLPIKTFKLLTNK 1325
Score = 64.3 bits (155), Expect = 3e-09
Identities = 68/285 (23%), Positives = 114/285 (39%), Gaps = 24/285 (8%)
Query: 658 NVSSTVSDLVSCNSGSGISVYDLWHSRLGHPHHDVLKQTLSLCNIS------VPSNKSVF 711
N+S + V + + Y H L H + ++ +L I+ V + ++
Sbjct: 148 NISVPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAID 207
Query: 712 SFCKACCLSKL--HRLPSSSSNTVYNT--PFELVFADLWGPASLESSCGFLYFLTCVDAC 767
C C + K HR S N+ PF+ + D++GP YF++ D
Sbjct: 208 YQCPDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDET 267
Query: 768 TKYTWVFPL--KKKSDTCATFINFQAMVELQFGHKLKSVQTDGGGEFKPLTSH--FQKLG 823
TK+ WV+PL +++ F A ++ QF + +Q D G E+ T H +K G
Sbjct: 268 TKFRWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNG 327
Query: 824 IIHRLTCPHTHHQNGSVERKHRHIVETGLALLSHASMPLQFWDHAFLAATYLINRMSTTT 883
I T +G ER +R +++ L + +P W A +T + N +
Sbjct: 328 ITPCYTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSL---- 383
Query: 884 LQGASPYFKLYG-QYPDFKSLKVFGSACFPFLRPYNSNKLSLHSK 927
ASP K Q+ L + S PF +P N + +SK
Sbjct: 384 ---ASPKSKKSARQHAGLAGLDI--STLLPFGQPVIVNDHNPNSK 423
>YME4_YEAST (Q04711) Transposon Ty1 protein B
Length = 1328
Score = 118 bits (296), Expect = 1e-25
Identities = 150/685 (21%), Positives = 281/685 (40%), Gaps = 72/685 (10%)
Query: 961 HRFPYPILFPTDHSSSSSAEFYPLSTIPIISHTAPPSSPVLAASGHSSPGPQDSPQQQQP 1020
HR P P +++SS + P+ T +S S + D P P
Sbjct: 664 HRSPSIDASPPENNSSHN--IVPIKTPTTVSEQNTEESIIA-----------DLPLPDLP 710
Query: 1021 PSATLSADDPSTSTPAVVSPPVPSSSAQSADTSA---------SVVAAAPPVIVNTHPMQ 1071
P + DP P + S SS D++A S+ + V+
Sbjct: 711 PESPTEFPDPFKELPPINSHQTNSSLGGIGDSNAYTTINSKKRSLEDNETEIKVSRDTWN 770
Query: 1072 TRAKNGIVKPRLQPTLLL-------THLEP-----------TSVKQAMKDAKWYKAMQEE 1113
T+ + PR + + L ++P T K + K+ +A +E
Sbjct: 771 TKNMRSLEPPRSKKRIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIKEKEKYIEAYHKE 830
Query: 1114 YTALMNNGTWTLVPLPANRTPVGCKWI----YRIKENPDGSINKYKARLVAKGYSQVQGF 1169
L+ TW +R + K + + DG+ +KAR VA+G Q
Sbjct: 831 VNQLLKMNTWD-TDKYYDRKEIDPKRVINSMFIFNRKRDGT---HKARFVARGDIQHPDT 886
Query: 1170 DYSETFSPVVKPITVRLILSLAISRGWPLQQLDVNNAFLNGVLEEEVYMVQPPGFEHKDK 1229
S S V + LSLA+ + + QLD+++A+L ++EE+Y+ PP DK
Sbjct: 887 YDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPPHLGMNDK 946
Query: 1230 NLVCKLQKALYGLKQAPRAWFHRLKEVLIRFGFQASKCDPSLFTYYSSQGCIYMLVYVDD 1289
+ +L+K+LYGLKQ+ W+ +K LI+ Q + ++ + + ++VDD
Sbjct: 947 --LIRLKKSLYGLKQSGANWYETIKSYLIK---QCGMEEVRGWSCVFKNSQVTICLFVDD 1001
Query: 1290 IIITGASMSLIQQLTAQLHSIFALK--QLGQLDY-----FLGVQVTHLSNGNLLLNQTKY 1342
+I+ ++ +++ L + K LG+ D LG+++ + + L
Sbjct: 1002 MILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIKYQRGKYMKLGMENS 1061
Query: 1343 ISDLLTKVNM---LDAAAISTPMQCGVKLSKNEGSALKDP-----TEYRSVVGALQYATI 1394
+++ + K+N+ +S P Q G+ + ++E +D E + ++G Y
Sbjct: 1062 LTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQDELEIDEDEYKEKVHEMQKLIGLASYVGY 1121
Query: 1395 T-RPEISFAVNKVCQFMAQPHEEHWKAVKRILRYLKGTLTHGILLQPCSMTRP-LPLIAY 1452
R ++ + +N + Q + P + +++++ T ++ T P L+A
Sbjct: 1122 KFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKNKPTEPDNKLVAI 1181
Query: 1453 CDADWGSDPDDRRSTSGSCVFLGYNLISWTAKKQSLVARSSTEAEYRSLANTTAELLWVQ 1512
DA +G+ P +S G+ L +I + K SL S+TEAE +++ + L +
Sbjct: 1182 SDASYGNQP-YYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAISESVPLLNNLS 1240
Query: 1513 SLLTELKIPFTIPTVYCDNMSTV-LLTHNPILHTRTKHMEMDIFFVREKVQDKSLLVQHV 1571
L+ EL + D+ ST+ ++ N R + +R++V L V ++
Sbjct: 1241 HLVQELNKKPITKGLLTDSKSTISIIISNNEEKFRNRFFGTKAMRLRDEVSGNHLHVCYI 1300
Query: 1572 PSEHQKADIFTKALSPTRFLLLKDK 1596
++ AD+ TK L F LL +K
Sbjct: 1301 ETKKNIADVMTKPLPIKTFKLLTNK 1325
Score = 64.3 bits (155), Expect = 3e-09
Identities = 68/285 (23%), Positives = 114/285 (39%), Gaps = 24/285 (8%)
Query: 658 NVSSTVSDLVSCNSGSGISVYDLWHSRLGHPHHDVLKQTLSLCNIS------VPSNKSVF 711
N+S + V + + Y H L H + ++ +L I+ V + ++
Sbjct: 148 NISVPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAID 207
Query: 712 SFCKACCLSKL--HRLPSSSSNTVYNT--PFELVFADLWGPASLESSCGFLYFLTCVDAC 767
C C + K HR S N+ PF+ + D++GP YF++ D
Sbjct: 208 YQCPDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDET 267
Query: 768 TKYTWVFPL--KKKSDTCATFINFQAMVELQFGHKLKSVQTDGGGEFKPLTSH--FQKLG 823
TK+ WV+PL +++ F A ++ QF + +Q D G E+ T H +K G
Sbjct: 268 TKFRWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNG 327
Query: 824 IIHRLTCPHTHHQNGSVERKHRHIVETGLALLSHASMPLQFWDHAFLAATYLINRMSTTT 883
I T +G ER +R +++ L + +P W A +T + N +
Sbjct: 328 ITPCYTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSL---- 383
Query: 884 LQGASPYFKLYG-QYPDFKSLKVFGSACFPFLRPYNSNKLSLHSK 927
ASP K Q+ L + S PF +P N + +SK
Sbjct: 384 ---ASPKSKKSARQHAGLAGLDI--STLLPFGQPVIVNDHNPNSK 423
>YJZ9_YEAST (P47100) Transposon Ty1 protein B
Length = 1755
Score = 117 bits (292), Expect = 3e-25
Identities = 150/686 (21%), Positives = 286/686 (40%), Gaps = 74/686 (10%)
Query: 961 HRFPYPILFPTDHSSSSSAEFYPLSTIPIISHTAPPSSPVLAASGHSSPGPQDSPQQQQP 1020
HR P P +++SS + P+ T +S S + D P P
Sbjct: 1091 HRSPSIDASPPENNSSHN--IVPIKTPTTVSEQNTEESIIA-----------DLPLPDLP 1137
Query: 1021 PSATLSADDPSTSTPAVVSPPVPSSSAQSADTSA---------SVVAAAPPVIVNTHPMQ 1071
P + DP P + S SS D++A S+ + V+
Sbjct: 1138 PESPTEFPDPFKELPPINSRQTNSSLGGIGDSNAYTTINSKKRSLEDNETEIKVSRDTWN 1197
Query: 1072 TRAKNGIVKPRLQPTLLLT-------HLEP-----------TSVKQAMKDAKWYKAMQEE 1113
T+ + PR + + L ++P T K + K+ +A +E
Sbjct: 1198 TKNMRSLEPPRSKKRIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIKEKEKYIEAYHKE 1257
Query: 1114 YTALMNNGTWTLVPLPANRTPVGCKWI----YRIKENPDGSINKYKARLVAKGYSQVQGF 1169
L+ TW +R + K + + + DG+ +KAR VA+G Q
Sbjct: 1258 VNQLLKMKTWDTDEY-YDRKEIDPKRVINSMFIFNKKRDGT---HKARFVARGDIQHPDT 1313
Query: 1170 DYSETFSPVVKPITVRLILSLAISRGWPLQQLDVNNAFLNGVLEEEVYMVQPPGFEHKDK 1229
S S V + LSLA+ + + QLD+++A+L ++EE+Y+ PP DK
Sbjct: 1314 YDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPPHLGMNDK 1373
Query: 1230 NLVCKLQKALYGLKQAPRAWFHRLKEVLIRFGFQASKCDPSLFTYYSSQGCIYMLVYVDD 1289
+ +L+K+LYGLKQ+ W+ +K LI+ Q + ++ + + ++VDD
Sbjct: 1374 --LIRLKKSLYGLKQSGANWYETIKSYLIQ---QCGMEEVRGWSCVFKNSQVTICLFVDD 1428
Query: 1290 IIITGASMSLIQQLTAQLHSIFALK--QLGQLDY-----FLGVQVTHLSNGNLLLNQTKY 1342
+++ +++ +++ +L + K LG+ D LG+++ + + L
Sbjct: 1429 MVLFSKNLNSNKRIIEKLKMQYDTKIINLGESDEEIQYDILGLEIKYQRGKYMKLGMENS 1488
Query: 1343 ISDLLTKVNM---LDAAAISTPMQCGVKLSKNEGSALKDP-----TEYRSVVGALQYATI 1394
+++ + K+N+ +S P Q G+ + + E +D E + ++G Y
Sbjct: 1489 LTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQQELELEEDDYKMKVHEMQKLIGLASYVGY 1548
Query: 1395 T-RPEISFAVNKVCQFMAQPHEEHWKAVKRILRYLKGTLTHGILLQPCSMTRPL-PLIAY 1452
R ++ + +N + Q + P ++ +++++ T ++ +P L+
Sbjct: 1549 KFRFDLLYYINTLAQHILFPSKQVLDMTYELIQFIWNTRDKQLIWHKSKPVKPTNKLVVI 1608
Query: 1453 CDADWGSDPDDRRSTSGSCVFLGYNLISWTAKKQSLVARSSTEAEYRSLANTTAELLWVQ 1512
DA +G+ P +S G+ L +I + K SL S+TEAE +++ + L +
Sbjct: 1609 SDASYGNQP-YYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAISESVPLLNNLS 1667
Query: 1513 SLLTEL-KIPFTIPTVYCDNMSTV-LLTHNPILHTRTKHMEMDIFFVREKVQDKSLLVQH 1570
L+ EL K P T + D+ ST+ ++ N R + +R++V L V +
Sbjct: 1668 YLIQELDKKPIT-KGLLTDSKSTISIIISNNEEKFRNRFFGTKAMRLRDEVSGNHLHVCY 1726
Query: 1571 VPSEHQKADIFTKALSPTRFLLLKDK 1596
+ ++ AD+ TK L F LL +K
Sbjct: 1727 IETKKNIADVMTKPLPIKTFKLLTNK 1752
Score = 64.3 bits (155), Expect = 3e-09
Identities = 68/285 (23%), Positives = 114/285 (39%), Gaps = 24/285 (8%)
Query: 658 NVSSTVSDLVSCNSGSGISVYDLWHSRLGHPHHDVLKQTLSLCNIS------VPSNKSVF 711
N+S + V + + Y H L H + ++ +L I+ V + ++
Sbjct: 575 NISVPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAID 634
Query: 712 SFCKACCLSKL--HRLPSSSSNTVYNT--PFELVFADLWGPASLESSCGFLYFLTCVDAC 767
C C + K HR S N+ PF+ + D++GP YF++ D
Sbjct: 635 YQCPDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDET 694
Query: 768 TKYTWVFPL--KKKSDTCATFINFQAMVELQFGHKLKSVQTDGGGEFKPLTSH--FQKLG 823
TK+ WV+PL +++ F A ++ QF + +Q D G E+ T H +K G
Sbjct: 695 TKFRWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNG 754
Query: 824 IIHRLTCPHTHHQNGSVERKHRHIVETGLALLSHASMPLQFWDHAFLAATYLINRMSTTT 883
I T +G ER +R +++ L + +P W A +T + N +
Sbjct: 755 ITPCYTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSL---- 810
Query: 884 LQGASPYFKLYG-QYPDFKSLKVFGSACFPFLRPYNSNKLSLHSK 927
ASP K Q+ L + S PF +P N + +SK
Sbjct: 811 ---ASPKSKKSARQHAGLAGLDI--STLLPFGQPVIVNDHNPNSK 850
>M820_ARATH (P92520) Hypothetical mitochondrial protein AtMg00820
(ORF170)
Length = 170
Score = 116 bits (291), Expect = 4e-25
Identities = 65/140 (46%), Positives = 90/140 (63%), Gaps = 10/140 (7%)
Query: 1070 MQTRAKNGIVK--PRLQPTLLLT-HLEPTSVKQAMKDAKWYKAMQEEYTALMNNGTWTLV 1126
M TR+K GI K P+ T+ T EP SV A+KD W +AMQEE AL N TW LV
Sbjct: 1 MLTRSKAGINKLNPKYSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILV 60
Query: 1127 PLPANRTPVGCKWIYRIKENPDGSINKYKARLVAKGYSQVQGFDYSETFSPVVKPITVRL 1186
P P N+ +GCKW+++ K + DG++++ KARLVAKG+ Q +G + ET+SPVV+ T+R
Sbjct: 61 PPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRT 120
Query: 1187 ILSLAISRGWPLQQLDVNNA 1206
IL++A QQL+V +
Sbjct: 121 ILNVA-------QQLEVGQS 133
>YJZ7_YEAST (P47098) Transposon Ty1 protein B
Length = 1755
Score = 116 bits (290), Expect = 6e-25
Identities = 148/685 (21%), Positives = 282/685 (40%), Gaps = 72/685 (10%)
Query: 961 HRFPYPILFPTDHSSSSSAEFYPLSTIPIISHTAPPSSPVLAASGHSSPGPQDSPQQQQP 1020
HR P P +++SS + P+ T +S S + D P P
Sbjct: 1091 HRSPSIDASPPENNSSHN--IVPIKTPTTVSEQNTEESIIA-----------DLPLPDLP 1137
Query: 1021 PSATLSADDPSTSTPAVVSPPVPSSSAQSADTSA---------SVVAAAPPVIVNTHPMQ 1071
P + DP P + S SS D++A S+ + V+
Sbjct: 1138 PESPTEFPDPFKELPPINSHQTNSSLGGIGDSNAYTTINSKKRSLEDNETEIKVSRDTWN 1197
Query: 1072 TRAKNGIVKPRLQPTLLLT-------HLEP-----------TSVKQAMKDAKWYKAMQEE 1113
T+ + PR + + L ++P T K + K+ +A +E
Sbjct: 1198 TKNMRSLEPPRSKKRIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIKEKEKYIEAYHKE 1257
Query: 1114 YTALMNNGTWTLVPLPANRTPVGCKWI----YRIKENPDGSINKYKARLVAKGYSQVQGF 1169
L+ TW +R + K + + + DG+ +KAR VA+G Q
Sbjct: 1258 VNQLLKMKTWDTDEY-YDRKEIDPKRVINSMFIFNKKRDGT---HKARFVARGDIQHPDT 1313
Query: 1170 DYSETFSPVVKPITVRLILSLAISRGWPLQQLDVNNAFLNGVLEEEVYMVQPPGFEHKDK 1229
+ S V + LSLA+ + + QLD+++A+L ++EE+Y+ PP DK
Sbjct: 1314 YDTGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPPHLGMNDK 1373
Query: 1230 NLVCKLQKALYGLKQAPRAWFHRLKEVLIRFGFQASKCDPSLFTYYSSQGCIYMLVYVDD 1289
+ +L+K+ YGLKQ+ W+ +K LI+ Q + ++ + + ++VDD
Sbjct: 1374 --LIRLKKSHYGLKQSGANWYETIKSYLIK---QCGMEEVRGWSCVFKNSQVTICLFVDD 1428
Query: 1290 IIITGASMSLIQQLTAQLHSIFALK--QLGQLDY-----FLGVQVTHLSNGNLLLNQTKY 1342
+I+ ++ +++ L + K LG+ D LG+++ + + L
Sbjct: 1429 MILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIKYQRGKYMKLGMENS 1488
Query: 1343 ISDLLTKVNM---LDAAAISTPMQCGVKLSKNEGSALKDP-----TEYRSVVGALQYATI 1394
+++ + K+N+ +S P Q G+ + ++E +D E + ++G Y
Sbjct: 1489 LTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQDELEIDEDEYKEKVHEMQKLIGLASYVGY 1548
Query: 1395 T-RPEISFAVNKVCQFMAQPHEEHWKAVKRILRYLKGTLTHGILLQPCSMTRP-LPLIAY 1452
R ++ + +N + Q + P + +++++ T ++ T P L+A
Sbjct: 1549 KFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKNKPTEPDNKLVAI 1608
Query: 1453 CDADWGSDPDDRRSTSGSCVFLGYNLISWTAKKQSLVARSSTEAEYRSLANTTAELLWVQ 1512
DA +G+ P +S G+ L +I + K SL S+TEAE +++ + L +
Sbjct: 1609 SDASYGNQP-YYKSQIGNIFLLNGKVIGGKSTKASLTCTSTTEAEIHAISESVPLLNNLS 1667
Query: 1513 SLLTELKIPFTIPTVYCDNMSTV-LLTHNPILHTRTKHMEMDIFFVREKVQDKSLLVQHV 1571
L+ EL I + D+ ST+ ++ R + +R++V +L V ++
Sbjct: 1668 YLIQELNKKPIIKGLLTDSRSTISIIKSTNEEKFRNRFFGTKAMRLRDEVSGNNLYVYYI 1727
Query: 1572 PSEHQKADIFTKALSPTRFLLLKDK 1596
++ AD+ TK L F LL +K
Sbjct: 1728 ETKKNIADVMTKPLPIKTFKLLTNK 1752
Score = 65.1 bits (157), Expect = 2e-09
Identities = 104/467 (22%), Positives = 175/467 (37%), Gaps = 59/467 (12%)
Query: 496 NNPGIFVDHVPSSSQEQLLVGNGQGLPIQSIGSALLPSSFNPTASL---ILKKLLLVPSI 552
N+P D + S+ E + + N L ++G L S+ N T + LLL
Sbjct: 408 NSPSTDNDSISKSTTEPIQLNNKHDL---TLGQELTESTVNHTNHSDDELPGHLLLDSGA 464
Query: 553 TKNLVSVSRFARDNNVFFSFHANHCSVHHQDTYEL------LLTGTVGDDGLYYFDGPLT 606
++ L+ S H H + + D + + +GD ++ D T
Sbjct: 465 SRTLIR------------SAHHIHSASSNPDINVVDAQKRNIPINAIGDLQFHFQDNTKT 512
Query: 607 --KASSQPQSSSPLSSIQACLASKSAANKASPAIDLQSATV-SPIVPCNNADSV------ 657
K P + L S+ A A ++ TV +PIV + V
Sbjct: 513 SIKVLHTPNIAYDLLSLNELAAVDITACFTKNVLERSDGTVLAPIVQYGDFYWVSKRYLL 572
Query: 658 --NVSSTVSDLVSCNSGSGISVYDLWHSRLGHPHHDVLKQTLSLCNIS------VPSNKS 709
N+S + V + + Y H L H + ++ +L I+ V + +
Sbjct: 573 PSNISVPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSA 632
Query: 710 VFSFCKACCLSKL--HRLPSSSSNTVYNT--PFELVFADLWGPASLESSCGFLYFLTCVD 765
+ C C + K HR S N+ PF+ + D++GP YF++ D
Sbjct: 633 IDYQCPDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTD 692
Query: 766 ACTKYTWVFPL--KKKSDTCATFINFQAMVELQFGHKLKSVQTDGGGEFKPLTSH--FQK 821
TK+ WV+PL +++ F A ++ QF + +Q D G E+ T H +K
Sbjct: 693 ETTKFRWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEK 752
Query: 822 LGIIHRLTCPHTHHQNGSVERKHRHIVETGLALLSHASMPLQFWDHAFLAATYLINRMST 881
GI T +G ER +R +++ L + +P W A +T + N +
Sbjct: 753 NGITPCYTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSL-- 810
Query: 882 TTLQGASPYFKLYG-QYPDFKSLKVFGSACFPFLRPYNSNKLSLHSK 927
ASP K Q+ L + S PF +P N + +SK
Sbjct: 811 -----ASPKSKKSARQHAGLAGLDI--STLLPFGQPVIVNDHNPNSK 850
>YCB9_YEAST (P25384) Transposon Ty2 protein B (Ty1-17 protein B)
Length = 1770
Score = 115 bits (289), Expect = 7e-25
Identities = 121/517 (23%), Positives = 233/517 (44%), Gaps = 38/517 (7%)
Query: 1105 KWYKAMQEEYTALMNNGTWTLVPLPANRTPVGCKWI----YRIKENPDGSINKYKARLVA 1160
++ +A +E + L+ TW +R + K + + + DG+ +KAR VA
Sbjct: 1264 RYVEAYHKEISQLLKMNTWDTNKY-YDRNDIDPKKVINSMFIFNKKRDGT---HKARFVA 1319
Query: 1161 KGYSQVQGFDYSETFSPVVKPITVRLILSLAISRGWPLQQLDVNNAFLNGVLEEEVYMVQ 1220
+G Q S+ S V + LS+A+ + + QLD+++A+L ++EE+Y+
Sbjct: 1320 RGDIQHPDTYDSDMQSNTVHHYALMTSLSIALDNDYYITQLDISSAYLYADIKEELYIRP 1379
Query: 1221 PPGFEHKDKNLVCKLQKALYGLKQAPRAWFHRLKEVLIRFGFQASKCDPSLFTYYS---S 1277
PP DK L +L+K+LYGLKQ+ W+ +K LI + CD +S
Sbjct: 1380 PPHLGLNDKLL--RLRKSLYGLKQSGANWYETIKSYLI------NCCDMQEVRGWSCVFK 1431
Query: 1278 QGCIYMLVYVDDIIITGASMSLIQQLTAQLHSIFALK--QLGQLDY-----FLGVQVTHL 1330
+ + ++VDD+I+ ++ +++ L + K LG+ D LG+++ +
Sbjct: 1432 NSQVTICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIKYQ 1491
Query: 1331 SNGNLLLNQTKYISDLLTKVNM---LDAAAISTPMQCGVKLSKNEGSALKDP-----TEY 1382
+ + L K +++ L K+N+ + P Q G + ++E +D E
Sbjct: 1492 RSKYMKLGMEKSLTEKLPKLNVPLNPKGKKLRAPGQPGHYIDQDELEIDEDEYKEKVHEM 1551
Query: 1383 RSVVGALQYATIT-RPEISFAVNKVCQFMAQPHEEHWKAVKRILRYLKGTLTHGILLQPC 1441
+ ++G Y R ++ + +N + Q + P + +++++ T ++
Sbjct: 1552 QKLIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKN 1611
Query: 1442 SMTRP-LPLIAYCDADWGSDPDDRRSTSGSCVFLGYNLISWTAKKQSLVARSSTEAEYRS 1500
T+P L+A DA +G+ P +S G+ L +I + K SL S+TEAE +
Sbjct: 1612 KPTKPDNKLVAISDASYGNQP-YYKSQIGNIFLLNGKVIGGKSTKASLTCTSTTEAEIHA 1670
Query: 1501 LANTTAELLWVQSLLTELKIPFTIPTVYCDNMSTV-LLTHNPILHTRTKHMEMDIFFVRE 1559
++ L + L+ EL I + D+ ST+ ++ R + +R+
Sbjct: 1671 VSEAIPLLNNLSHLVQELNKKPIIKGLLTDSRSTISIIKSTNEEKFRNRFFGTKAMRLRD 1730
Query: 1560 KVQDKSLLVQHVPSEHQKADIFTKALSPTRFLLLKDK 1596
+V +L V ++ ++ AD+ TK L F LL +K
Sbjct: 1731 EVSGNNLYVYYIETKKNIADVMTKPLPIKTFKLLTNK 1767
Score = 65.9 bits (159), Expect = 9e-10
Identities = 60/240 (25%), Positives = 100/240 (41%), Gaps = 20/240 (8%)
Query: 659 VSSTVSDLVSCNSGSGISV----YDLWHSRLGHPHHDVLKQTLSLCNISVP-------SN 707
+ S +S L N SV Y L H LGH + ++++L ++ SN
Sbjct: 568 IPSHISKLTINNVNKSKSVNKYPYPLIHRMLGHANFRSIQKSLKKNAVTYLKESDIEWSN 627
Query: 708 KSVFSFCKACCLSKL--HRLPSSSSNTVYNT--PFELVFADLWGPASLESSCGFLYFLTC 763
S + C C + K HR S + PF+ + D++GP YF++
Sbjct: 628 ASTYQ-CPDCLIGKSTKHRHVKGSRLKYQESYEPFQYLHTDIFGPVHHLPKSAPSYFISF 686
Query: 764 VDACTKYTWVFPL--KKKSDTCATFINFQAMVELQFGHKLKSVQTDGGGEFKPLTSH--F 819
D T++ WV+PL +++ F + A ++ QF ++ +Q D G E+ T H F
Sbjct: 687 TDEKTRFQWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTNKTLHKFF 746
Query: 820 QKLGIIHRLTCPHTHHQNGSVERKHRHIVETGLALLSHASMPLQFWDHAFLAATYLINRM 879
GI T +G ER +R ++ LL + +P W A +T + N +
Sbjct: 747 TNRGITACYTTTADSRAHGVAERLNRTLLNDCRTLLHCSGLPNHLWFSAVEFSTIIRNSL 806
>YMT5_YEAST (Q04214) Transposon Ty1 protein B
Length = 1328
Score = 114 bits (284), Expect = 3e-24
Identities = 120/522 (22%), Positives = 235/522 (44%), Gaps = 34/522 (6%)
Query: 1098 KQAMKDAKWYKAMQEEYTALMNNGTWTLVPLPANRTPVGCKWI----YRIKENPDGSINK 1153
K + K+ +A +E L+ TW +R + K + + DG+
Sbjct: 815 KDIKEKEKYIEAYHKEVNQLLKMKTWDTDKY-YDRKEIDPKRVINSMFIFNRKRDGT--- 870
Query: 1154 YKARLVAKGYSQVQGFDYSETFSPVVKPITVRLILSLAISRGWPLQQLDVNNAFLNGVLE 1213
+KAR VA+G Q S S V + LSLA+ + + QLD+++A+L ++
Sbjct: 871 HKARFVARGDIQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIK 930
Query: 1214 EEVYMVQPPGFEHKDKNLVCKLQKALYGLKQAPRAWFHRLKEVLIRFGFQASKCDPSLFT 1273
EE+Y+ PP DK + +L+K+LYGLKQ+ W+ +K LI+ Q + ++
Sbjct: 931 EELYIRPPPHLGMNDK--LIRLKKSLYGLKQSGANWYETIKSYLIK---QCGMEEVRGWS 985
Query: 1274 YYSSQGCIYMLVYVDDIIITGASMSLIQQLTAQLHSIFALK--QLGQLDY-----FLGVQ 1326
+ + ++VDD+++ +++ +++ +L + K LG+ D LG++
Sbjct: 986 CVFENSQVTICLFVDDMVLFSKNLNSNKRIIDKLKMQYDTKIINLGESDEEIQYDILGLE 1045
Query: 1327 VTHLSNGNLLLNQTKYISDLLTKVNM---LDAAAISTPMQCGVKLSKNEGSALKDP---- 1379
+ + + L +++ + K+N+ +S P Q G+ + + E +D
Sbjct: 1046 IKYQRGKYMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQQELELEEDDYKMK 1105
Query: 1380 -TEYRSVVGALQYATIT-RPEISFAVNKVCQFMAQPHEEHWKAVKRILRYLKGTLTHGIL 1437
E + ++G Y R ++ + +N + Q + P ++ +++++ T ++
Sbjct: 1106 VHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSKQVLDMTYELIQFIWNTRDKQLI 1165
Query: 1438 LQPCSMTRPL-PLIAYCDADWGSDPDDRRSTSGSCVFLGYNLISWTAKKQSLVARSSTEA 1496
+P L+ DA +G+ P +S G+ L +I + K SL S+TEA
Sbjct: 1166 WHKSKPVKPTNKLVVISDASYGNQP-YYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEA 1224
Query: 1497 EYRSLANTTAELLWVQSLLTEL-KIPFTIPTVYCDNMSTV-LLTHNPILHTRTKHMEMDI 1554
E +++ + L + L+ EL K P T + D+ ST+ ++ N R +
Sbjct: 1225 EIHAISESVPLLNNLSYLIQELDKKPIT-KGLLTDSKSTISIIISNNEEKFRNRFFGTKA 1283
Query: 1555 FFVREKVQDKSLLVQHVPSEHQKADIFTKALSPTRFLLLKDK 1596
+R++V L V ++ ++ AD+ TK L F LL +K
Sbjct: 1284 MRLRDEVSGNHLHVCYIETKKNIADVMTKPLPIKTFKLLTNK 1325
Score = 64.3 bits (155), Expect = 3e-09
Identities = 68/285 (23%), Positives = 114/285 (39%), Gaps = 24/285 (8%)
Query: 658 NVSSTVSDLVSCNSGSGISVYDLWHSRLGHPHHDVLKQTLSLCNIS------VPSNKSVF 711
N+S + V + + Y H L H + ++ +L I+ V + ++
Sbjct: 148 NISVPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAID 207
Query: 712 SFCKACCLSKL--HRLPSSSSNTVYNT--PFELVFADLWGPASLESSCGFLYFLTCVDAC 767
C C + K HR S N+ PF+ + D++GP YF++ D
Sbjct: 208 YQCPDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDET 267
Query: 768 TKYTWVFPL--KKKSDTCATFINFQAMVELQFGHKLKSVQTDGGGEFKPLTSH--FQKLG 823
TK+ WV+PL +++ F A ++ QF + +Q D G E+ T H +K G
Sbjct: 268 TKFRWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNG 327
Query: 824 IIHRLTCPHTHHQNGSVERKHRHIVETGLALLSHASMPLQFWDHAFLAATYLINRMSTTT 883
I T +G ER +R +++ L + +P W A +T + N +
Sbjct: 328 ITPCYTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSL---- 383
Query: 884 LQGASPYFKLYG-QYPDFKSLKVFGSACFPFLRPYNSNKLSLHSK 927
ASP K Q+ L + S PF +P N + +SK
Sbjct: 384 ---ASPKSKKSARQHAGLAGLDI--STLLPFGQPVIVNDHNPNSK 423
>M240_ARATH (P93290) Hypothetical mitochondrial protein AtMg00240
(ORF111a)
Length = 111
Score = 73.6 bits (179), Expect = 4e-12
Identities = 36/81 (44%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Query: 1391 YATITRPEISFAVNKVCQFMAQPHEEHWKAVKRILRYLKGTLTHGILLQPCSMTRPLPLI 1450
Y TITRP+++FAVN++ QF + +AV ++L Y+KGT+ G+ S T L L
Sbjct: 2 YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFY---SATSDLQLK 58
Query: 1451 AYCDADWGSDPDDRRSTSGSC 1471
A+ D+DW S PD RRS +G C
Sbjct: 59 AFADSDWASCPDTRRSVTGFC 79
>TNK1_HUMAN (O95271) Tankyrase 1 (EC 2.4.2.30) (TANK1) (Tankyrase I)
(TNKS-1) (TRF1-interacting ankyrin-related ADP-ribose
polymerase)
Length = 1327
Score = 53.9 bits (128), Expect = 3e-06
Identities = 49/154 (31%), Positives = 69/154 (43%), Gaps = 13/154 (8%)
Query: 236 QAQNSPSSSTAPAPPPPQAMWTQPAPAPSSTMAQPPATSVAP--SQPVDTAVDSGYGNRD 293
Q Q +P +S P PPPP P AP +T A P A+ +AP S A+ G G+RD
Sbjct: 17 QLQPAPGASAPPPPPPPPL---SPGLAPGTTPASPTASGLAPFASPRHGLALPEGDGSRD 73
Query: 294 EQNR-NSGGYGRGRGRGRGRNVQCTYCSK------WGHDAASCWSRPSGVSSNANSSANS 346
+R S G + CT + AA P+G SN + S++S
Sbjct: 74 PPDRPRSPDPVDGTSCCSTTSTICTVAAAPVVPAVSTSSAAGVAPNPAGSGSNNSPSSSS 133
Query: 347 AQSGNSGSNFSVPGVNLGFSPMQFGGFPSMANFG 380
+ + +S S+ S PG +L SP + G S A G
Sbjct: 134 SPTSSSSSSPSSPGSSLAESP-EAAGVSSTAPLG 166
>POL_FOAMV (P14350) Pol polyprotein [Contains: Reverse
transcriptase/ribonuclease H (EC 2.7.7.49) (EC 3.1.26.4)
(RT); Integrase (IN)]
Length = 886
Score = 49.7 bits (117), Expect = 7e-05
Identities = 44/132 (33%), Positives = 61/132 (45%), Gaps = 10/132 (7%)
Query: 737 PFELVFADLWGPASLESSCGFLYFLTCVDACTKYTWVFPLKKKSDTCATFINFQAMVELQ 796
PF+ F D GP L S G+LY L VD T +TW++P K S T AT + + +
Sbjct: 675 PFDKFFIDYIGP--LPPSQGYLYVLVVVDGMTGFTWLYPTKAPS-TSATVKSLNVLTSIA 731
Query: 797 FGHKLKSVQTDGGGEFKPLT-SHFQKLGIIHRLTCPHTHHQNGS-VERKHRHIVETGLAL 854
K + +D G F T + + K IH H Q+GS VERK+ I L
Sbjct: 732 IP---KVIHSDQGAAFTSSTFAEWAKERGIHLEFSTPYHPQSGSKVERKNSDIKRLLTKL 788
Query: 855 LSHASMPLQFWD 866
L P +++D
Sbjct: 789 L--VGRPTKWYD 798
>NUP1_RAT (P70581) Nucleoporin p58/p45 (Nucleoporin-like protein 1)
Length = 585
Score = 49.3 bits (116), Expect = 9e-05
Identities = 46/150 (30%), Positives = 62/150 (40%), Gaps = 20/150 (13%)
Query: 238 QNSPSSSTAPAPPPPQAMWTQPAPAPSSTMAQPPATSVAPS------QPVDTAVDSGYGN 291
QN+P +T P P A A + T Q PAT PS P + + +G +
Sbjct: 429 QNAPRVTTGPTPFSTMPNAAAVAMAATLTQQQQPATGPQPSLGVSFGTPFGSGIGTGLQS 488
Query: 292 RDEQNRNSGGYGRGRGRGRGRNVQCTYCSKWGHDAASCWSRPSGVSSNANSSANSAQSGN 351
+ N GG+G G G G T S +G +PSG + SA S
Sbjct: 489 SGLGSSNLGGFGTSSGFGCG----TTGASTFGFGTT---DKPSG-----SLSAGFGSSST 536
Query: 352 SGSNFSVPGVNLGFSPMQFG-GFPSMANFG 380
SG NFS PG+ + + FG P+ A FG
Sbjct: 537 SGFNFSNPGITAS-AGLTFGVSNPASAGFG 565
>NUP1_MOUSE (Q8R332) Nucleoporin p58/p45 (Nucleoporin-like protein
1)
Length = 587
Score = 49.3 bits (116), Expect = 9e-05
Identities = 46/150 (30%), Positives = 62/150 (40%), Gaps = 20/150 (13%)
Query: 238 QNSPSSSTAPAPPPPQAMWTQPAPAPSSTMAQPPATSVAPS------QPVDTAVDSGYGN 291
QN+P +T P P A A + T Q PAT PS P + + +G +
Sbjct: 431 QNAPRVTTGPTPFSTMPNAAAVAMAATLTQQQQPATGPQPSLGVSFGTPFGSGIGTGLQS 490
Query: 292 RDEQNRNSGGYGRGRGRGRGRNVQCTYCSKWGHDAASCWSRPSGVSSNANSSANSAQSGN 351
+ N GG+G G G G T S +G +PSG + SA S
Sbjct: 491 SGLGSSNLGGFGTSSGFGCG----TTGASTFGFGTT---DKPSG-----SLSAGFGSSST 538
Query: 352 SGSNFSVPGVNLGFSPMQFG-GFPSMANFG 380
SG NFS PG+ + + FG P+ A FG
Sbjct: 539 SGFNFSNPGITAS-AGLTFGVSNPASAGFG 567
>HORN_MOUSE (Q8VHD8) Hornerin
Length = 2496
Score = 49.3 bits (116), Expect = 9e-05
Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 7/133 (5%)
Query: 264 SSTMAQPPATSVAPSQPVDTAVDSGYGNRDEQNRNSGGYGRGRGRGRGRNVQCTYCSKWG 323
SST ++ +TS S T+ G G+ + GG G+GR G+ + ++
Sbjct: 428 SSTQSRGRSTSRESS----TSQQFGSGSGRSSGFSQGGSGQGRSSRGGQQGSFSGQTEGS 483
Query: 324 HDAASCWSRPSGVSSNANSSANSAQSGNSGSNFSVPGVNLGFSPMQFGGFPSMANFGFPP 383
SC + SG N S +SA SG GS++S + + GG PS + G
Sbjct: 484 QQHGSCCGQSSGYGQNEYGSGHSASSGQQGSHYS---QSSSYGTHNSGGSPSSSQRGHGS 540
Query: 384 YAPYNSMLPQYGS 396
+ +S L QYGS
Sbjct: 541 RSGRSSGLGQYGS 553
Score = 45.8 bits (107), Expect = 0.001
Identities = 38/133 (28%), Positives = 58/133 (43%), Gaps = 7/133 (5%)
Query: 264 SSTMAQPPATSVAPSQPVDTAVDSGYGNRDEQNRNSGGYGRGRGRGRGRNVQCTYCSKWG 323
SST ++ +TS S T+ G G+ + G G+GR G+ + ++
Sbjct: 1821 SSTQSRGRSTSRESS----TSQRFGSGSGGSSGFSQGRSGQGRSSRGGQQGSFSGQTEGS 1876
Query: 324 HDAASCWSRPSGVSSNANSSANSAQSGNSGSNFSVPGVNLGFSPMQFGGFPSMANFGFPP 383
SC + SG N S +SA SG GS++S + + GG PS + G
Sbjct: 1877 QQHGSCCGQSSGYGQNEYGSGHSASSGQQGSHYS---QSSSYGTHNSGGSPSSSQRGHGS 1933
Query: 384 YAPYNSMLPQYGS 396
+ +S L QYGS
Sbjct: 1934 RSGRSSGLGQYGS 1946
Score = 45.8 bits (107), Expect = 0.001
Identities = 38/133 (28%), Positives = 58/133 (43%), Gaps = 7/133 (5%)
Query: 264 SSTMAQPPATSVAPSQPVDTAVDSGYGNRDEQNRNSGGYGRGRGRGRGRNVQCTYCSKWG 323
SST ++ +TS S T+ G G+ + G G+GR G+ + ++
Sbjct: 1473 SSTQSRGRSTSRESS----TSQRFGSGSGGSSGFSQGRSGQGRSSRGGQQGSFSGQTEGS 1528
Query: 324 HDAASCWSRPSGVSSNANSSANSAQSGNSGSNFSVPGVNLGFSPMQFGGFPSMANFGFPP 383
SC + SG N S +SA SG GS++S + + GG PS + G
Sbjct: 1529 QQHGSCCGQSSGYGQNEYGSGHSASSGQQGSHYS---QSSSYGTHNSGGSPSSSQRGHGS 1585
Query: 384 YAPYNSMLPQYGS 396
+ +S L QYGS
Sbjct: 1586 RSGRSSGLGQYGS 1598
Score = 45.8 bits (107), Expect = 0.001
Identities = 38/133 (28%), Positives = 58/133 (43%), Gaps = 7/133 (5%)
Query: 264 SSTMAQPPATSVAPSQPVDTAVDSGYGNRDEQNRNSGGYGRGRGRGRGRNVQCTYCSKWG 323
SST ++ +TS S T+ G G+ + G G+GR G+ + ++
Sbjct: 1125 SSTQSRGRSTSRESS----TSQRFGSGSGGSSGFSQGRSGQGRSSRGGQQGSFSGQTEGS 1180
Query: 324 HDAASCWSRPSGVSSNANSSANSAQSGNSGSNFSVPGVNLGFSPMQFGGFPSMANFGFPP 383
SC + SG N S +SA SG GS++S + + GG PS + G
Sbjct: 1181 QQHGSCCGQSSGYGQNEYGSGHSASSGQQGSHYS---QSSSYGTHNSGGSPSSSQRGHGS 1237
Query: 384 YAPYNSMLPQYGS 396
+ +S L QYGS
Sbjct: 1238 RSGRSSGLGQYGS 1250
Score = 40.0 bits (92), Expect = 0.052
Identities = 38/134 (28%), Positives = 57/134 (42%), Gaps = 8/134 (5%)
Query: 264 SSTMAQPPATSVAPSQPVDTAVDSGYGNRDEQNRNSGGYGRGRGRGRGRNVQCTYCSKWG 323
SST ++ +TS S T+ G G+ + G G+GR G+ + ++
Sbjct: 776 SSTQSRGRSTSRESS----TSQRFGSGSGGSSGFSQGRSGQGRSSRGGQQGSFSGQTEGS 831
Query: 324 HDAASCWSRPSGVSSNANSSANSAQSGNSGSNFSVPGVNLGFSPMQFGGFPSMANF-GFP 382
SC + SG N S +SA SG GS++S + + GG PS G
Sbjct: 832 QQHGSCCGQSSGYGQNEYGSGHSASSGQQGSHYS---QSSSYGTHNSGGSPSSRPAGGHG 888
Query: 383 PYAPYNSMLPQYGS 396
+ +S L QYGS
Sbjct: 889 SRSGRSSGLGQYGS 902
Score = 33.1 bits (74), Expect = 6.3
Identities = 44/167 (26%), Positives = 60/167 (35%), Gaps = 27/167 (16%)
Query: 289 YGNRDEQNRNSGGYGRGRGRGRGRNVQCTYCSKWGHDAASCWSRPSGVSSNANSSANSAQ 348
YG + +RNS RGR R + Y S G SG S + S++
Sbjct: 2159 YGEQGSGSRNSSTQSRGRSTSRESSTSQRYGSGSGES--------SGFSQGGSGQGRSSR 2210
Query: 349 SGNSGSNFSVPGVNLGFSPMQFGGFPSMANFGFPPYAPYNSMLPQYGSSVLSPSSMPPWS 408
G GS FS G G S Q G + FP S SS S S
Sbjct: 2211 GGQQGS-FS--GQTSGRSQHQSGSRHGSGSGQFPISGQQGSHHGHSSSSGTHNSGSSQSS 2267
Query: 409 PWCIPPTPYSHATDMQGMQAAGMSFVRPWLPQGQFPAPTAQTPQFPR 455
T +SH + + Q++G+ GQ+ +P+ QT R
Sbjct: 2268 -----STQWSHGSGSE--QSSGL---------GQYGSPSGQTSSSTR 2298
>OSA_DROME (Q8IN94) Trithorax group protein OSA (Eyelid protein)
Length = 2716
Score = 48.9 bits (115), Expect = 1e-04
Identities = 67/296 (22%), Positives = 98/296 (32%), Gaps = 49/296 (16%)
Query: 235 AQAQNSPSSSTAPAPPPPQAMWTQPAPAPSSTMAQPPATSVAPSQPVDTAVDSGYGNRDE 294
+ A NSP + PAPPP Q M P P PP + P+ + GY
Sbjct: 587 SSASNSPQQTPPPAPPPNQGMNNMATPPP------PPQGAAGGGYPMPPHMHGGY----- 635
Query: 295 QNRNSGGYGRGRGRGRGRNVQCTYCSKWGHDAASCWSRPSGVSSNANSSANSAQSGNSGS 354
GG G+ G Q + + P G + ++Q+G G+
Sbjct: 636 ---KMGGPGQSPGAQGYPPQQPQQYPPGNYPPRPQY--PPGAYATGPPPPPTSQAGAGGA 690
Query: 355 NFSVPGVNLGFSPMQFGGFPSMANFGFPPY--------------APYNSMLPQY--GSSV 398
N G G P + G P+ +PPY AP +M+ + G
Sbjct: 691 NSMPSGAQAGGYPGR--GMPNHTG-QYPPYQWVPPSPQQTVPGGAPGGAMVGNHVQGKGT 747
Query: 399 LSPSSM--PPWSPWCIPPTPYSHATD-MQGMQAAGMSFVRPWLPQGQFPAPTAQTPQFPR 455
P + PP P P ++ +Q G S P PQG PT P P
Sbjct: 748 PPPPVVGGPPPPQGSGSPRPLNYLKQHLQHKGGYGGSPTPPQGPQGYGNGPTGMHPGMPM 807
Query: 456 PPQQQVS-----------TGMHPQAMLATVPAHHSSPVTWCPDSGATHHVTNNPGI 500
P + T PQ+ + + P+SG H++ + GI
Sbjct: 808 GPPHHMGPPHGPTNMGPPTSTPPQSQMLQGGQPQGQGASGGPESGGPEHISQDNGI 863
Score = 41.6 bits (96), Expect = 0.018
Identities = 66/255 (25%), Positives = 88/255 (33%), Gaps = 46/255 (18%)
Query: 249 PPPPQAMWTQPAPAPSSTMAQPPATSVAPSQPVDTAVDSGYGNRDEQNRNSGGYGRGRGR 308
PPPP + P PSS+ P+ S PSQ + G ++ + +SGG G G
Sbjct: 441 PPPPHV--SAGGPPPSSSPGHAPSPSPQPSQASPSPHQELIG-QNSNDSSSGGAHSGMGS 497
Query: 309 G-----RGRNVQCTYCSKWGHDAASCWSRPSGVSSNANSSANSAQSGNSGSNFSVPGVNL 363
G + V S G + S V+ N S ++ +SG P V
Sbjct: 498 GPPGTPNPQQVMRPTPSPTGSSGSR--SMSPAVAQNHPISRPASNQSSSGGPMQQPPVGA 555
Query: 364 GFSPMQFGGFPSMANFGFP--PYAPYNSMLPQYGSSVLSPSSMPPWSPWCIPPTPYSHAT 421
G P P + G P P S Q +S S S+ P +P PP P +
Sbjct: 556 GGPP------PMPPHPGMPGGPPQQQQSQQQQASNSASSASNSPQQTP---PPAPPPN-- 604
Query: 422 DMQGMQ-----------AAGMSFVRP--------WLPQGQFPAPTAQTPQFPR--PPQQQ 460
QGM AAG + P GQ P PQ P+ PP
Sbjct: 605 --QGMNNMATPPPPPQGAAGGGYPMPPHMHGGYKMGGPGQSPGAQGYPPQQPQQYPPGNY 662
Query: 461 VSTGMHPQAMLATVP 475
+P AT P
Sbjct: 663 PPRPQYPPGAYATGP 677
Score = 36.6 bits (83), Expect = 0.57
Identities = 60/244 (24%), Positives = 74/244 (29%), Gaps = 55/244 (22%)
Query: 247 PAPPPPQAMWTQPA--PAPSSTMAQPPA--------TSVAPSQPVDTAVDSGYGNRDEQN 296
P PPPPQ Q P PS PPA +P Q V A + Y
Sbjct: 1290 PGPPPPQQQQGQQGQQPPPSVGGGPPPAPQQHGPGQVPPSPQQHVRPAAGAPY------- 1342
Query: 297 RNSGGYGRGRGRGRGRNVQCTYCSKWGHDAASCWSRPSGVSSNANSSANSAQSGNSGSNF 356
GG G Y + S + G SS +G
Sbjct: 1343 -PPGGSG--------------YPTPVSRTPGSPYPSQPGAYGQYGSSDQYNATG------ 1381
Query: 357 SVPGVNLGFSPMQFGGFPSMANFGFPPYAPYNSMLP----QYGSSVLSPSSMPPWSPWCI 412
PG G P G +P +PPY P P QYG P S PP
Sbjct: 1382 -PPGQPFGQGP---GQYPPQNRNMYPPYGPEGEAPPTGANQYGPYGSRPYSQPP------ 1431
Query: 413 PPTPYSHATDMQGMQAAGMSFVRPWLPQGQFP-APTAQTPQFPRPPQQQVSTGMHPQAML 471
P P + G AG + P P +P +Q + PP Q HP +
Sbjct: 1432 PGGPQPPTQTVAGGPPAGGAPGAP--PSSAYPTGRPSQQDYYQPPPDQSPQPRRHPDFIK 1489
Query: 472 ATVP 475
+ P
Sbjct: 1490 DSQP 1493
Score = 35.0 bits (79), Expect = 1.7
Identities = 51/224 (22%), Positives = 73/224 (31%), Gaps = 40/224 (17%)
Query: 241 PSSSTAPAPPPPQAMWTQPAPAPSSTMAQPPATSVAPSQPVDTAVDSGYGNRDEQNRNSG 300
P +TA P + P P + A +++ S P + + +G G
Sbjct: 1175 PDYATAGQMQRPPSQNNPQTPHPGAAAAVAAGDNISVSNPFEDPIAAGGG-------PGS 1227
Query: 301 GYGRGRGRGRGRNVQCTYCSKWGHDAASCWSRPSGVSSNANSSANSA-QSGNSGSNFSVP 359
G G G G+G G G P S ++ +A Q P
Sbjct: 1228 GTGPGPGQGPGPGAASGGAGAVGAVGGGPQPHPPPPHSPHTAAQQAAGQHQQQHPQHQHP 1287
Query: 360 GVNLGFSPM----QFGGFPSMANFGFPPYAPYNSMLPQYGSSVLSPSSMPPWSPWCIPPT 415
G+ P Q G P + G PP AP Q+G P +PP+
Sbjct: 1288 GLPGPPPPQQQQGQQGQQPPPSVGGGPPPAP-----QQHG-------------PGQVPPS 1329
Query: 416 PYSHATDMQGMQAAGMSFVRPWLPQGQ-FPAPTAQTPQFPRPPQ 458
P H G P+ P G +P P ++TP P P Q
Sbjct: 1330 PQQHVRPAAG---------APYPPGGSGYPTPVSRTPGSPYPSQ 1364
Score = 33.9 bits (76), Expect = 3.7
Identities = 33/100 (33%), Positives = 42/100 (42%), Gaps = 19/100 (19%)
Query: 964 PYPILFPT---------DHSSSSSAEFYPLSTIPIISHTAPPSSPVLAASGHSSP--GPQ 1012
PYP +PT +H ++ S YP P ++P SP SGH P P
Sbjct: 377 PYPQRYPTPPGLPAGGSNHRTAYSTHQYPEPNRPWPGGSSP--SP---GSGHPLPPASPH 431
Query: 1013 DSP--QQQQPPSATLSA-DDPSTSTPAVVSPPVPSSSAQS 1049
P QQQ PP +SA P +S+P P P S S
Sbjct: 432 HVPPLQQQPPPPPHVSAGGPPPSSSPGHAPSPSPQPSQAS 471
Score = 33.5 bits (75), Expect = 4.9
Identities = 25/77 (32%), Positives = 34/77 (43%), Gaps = 5/77 (6%)
Query: 965 YPILFPTDHSSSSSAEFYPLSTIPIISHTAPPSSPVLAASGHSSPGPQDSPQQQQPPSAT 1024
+PI P + SSS P+ P+ + PP P G P Q S QQQ SA+
Sbjct: 532 HPISRPASNQSSSGG---PMQQPPVGAGGPPPMPPHPGMPG-GPPQQQQSQQQQASNSAS 587
Query: 1025 LSADDPSTSTPAVVSPP 1041
+++ P TP PP
Sbjct: 588 SASNSPQ-QTPPPAPPP 603
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.317 0.131 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 193,650,890
Number of Sequences: 164201
Number of extensions: 8682161
Number of successful extensions: 49603
Number of sequences better than 10.0: 515
Number of HSP's better than 10.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 435
Number of HSP's that attempted gapping in prelim test: 41132
Number of HSP's gapped (non-prelim): 5900
length of query: 1611
length of database: 59,974,054
effective HSP length: 124
effective length of query: 1487
effective length of database: 39,613,130
effective search space: 58904724310
effective search space used: 58904724310
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 73 (32.7 bits)
Lotus: description of TM0320a.8