HMX3 ORF clone pFN21AB8968

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AB8968

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Clone info.

Species

human

Clone Name

pFN21AB8968 Sequence (with vector) Restriction Map

Product ID

FHC16523

ORF Sequence

DNA sequence (1071 bp)
Protein sequence (357 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIBB8968

Symbol

HMX3

Alias : NKX-5.1, NKX5.1, Nkx5-1

Description

H6 family homeobox 3

Original Clone ID

cp01003

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1071 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 357 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS41575.1 9.8e-66 100.0 HMX3 CCDS47018.1 1.9e-11 47.4 HMX1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR020479 249 260 PR00024 Homeobox IPR020479 264 274 PR00024 Homeobox IPR020479 274 283 PR00024 Homeobox HMMPfam IPR001356 228 284 PF00046 Homeobox HMMSmart IPR001356 227 289 SM00389 Homeobox ProfileScan IPR001356 225 285 PS50071 Homeobox
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001099044 357 613380 100.0 100.0 NP_001180 333 602183,613330 32.5 89.1 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB8968 Download

>KIBB8968  1071 bp
ATGCCGGAACCCGGGCCGGACGCTGCCGGCACCGCCAGCGCACAGCCCCAACCGCCGCCG
CCCCCCCCACCCGCTCCCAAGGAGTCCCCGTTCTCCATCAAGAACCTGCTCAACGGAGAC
CACCACCGGCCGCCCCCTAAGCCTCAGCCGCCCCCACGGACGCTCTTCGCGCCAGCCTCG
GCTGCCGCCGCCGCCGCCGCTGCCGCTGCCGCGGCGGCCAAGGGGGCCCTGGAGGGCGCC
GCGGGCTTCGCGCTCTCGCAGGTGGGCGACCTGGCTTTCCCTCGCTTTGAGATCCCGGCG
CAGAGGTTTGCCCTGCCCGCGCACTACCTGGAGCGCTCCCCAGCCTGGTGGTACCCCTAC
ACCCTGACCCCCGCCGGCGGCCACCTCCCGCGACCTGAAGCCTCGGAGAAGGCCTTGCTG
AGAGACTCCTCCCCCGCCTCCGGCACAGACCGCGACTCTCCGGAGCCACTGCTCAAGGCC
GACCCCGATCACAAGGAGCTGGACTCCAAGAGCCCGGACGAGATCATTCTGGAGGAGAGC
GACTCCGAGGAAAGCAAAAAGGAAGGCGAAGCGGCGCCAGGCGCGGCCGGGGCGAGCGTA
GGGGCGGCGGCGGCCACTCCGGGCGCAGAAGACTGGAAGAAGGGCGCTGAAAGTCCAGAG
AAGAAGCCGGCGTGCCGCAAGAAGAAGACGCGCACAGTCTTCTCGCGCAGCCAGGTCTTC
CAGCTCGAGTCCACCTTCGACATGAAGCGCTATCTGAGCAGCTCGGAGCGAGCCGGCCTG
GCCGCGTCCCTGCACCTCACCGAGACGCAGGTCAAGATCTGGTTCCAGAACCGCCGCAAC
AAGTGGAAGCGGCAGCTGGCGGCGGAGCTGGAGGCGGCCAACCTGAGCCATGCCGCGGCG
CAGCGCATCGTGCGGGTGCCCATCCTCTACCACGAGAACTCGGCGGCCGAGGGCGCGGCG
GCTGCAGCCGCGGGGGCCCCGGTGCCAGTCAGCCAGCCGCTGCTCACCTTCCCGCACCCC
GTCTACTACTCGCACCCGGTGGTCTCTTCCGTGCCGCTGCTACGGCCGGTC

ORF Protein

Cloned ORF protein sequence for pFN21AB8968 Download

>KIBB8968  357 aa
MPEPGPDAAGTASAQPQPPPPPPPAPKESPFSIKNLLNGDHHRPPPKPQPPPRTLFAPAS
AAAAAAAAAAAAAKGALEGAAGFALSQVGDLAFPRFEIPAQRFALPAHYLERSPAWWYPY
TLTPAGGHLPRPEASEKALLRDSSPASGTDRDSPEPLLKADPDHKELDSKSPDEIILEES
DSEESKKEGEAAPGAAGASVGAAAATPGAEDWKKGAESPEKKPACRKKKTRTVFSRSQVF
QLESTFDMKRYLSSSERAGLAASLHLTETQVKIWFQNRRNKWKRQLAAELEAANLSHAAA
QRIVRVPILYHENSAAEGAAAAAAGAPVPVSQPLLTFPHPVYYSHPVVSSVPLLRPV

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB8968 Download

>pFN21AB8968  5776 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGCCGGAACCCGGGCCGGACGCTGCCGGCACCGC
CAGCGCACAGCCCCAACCGCCGCCGCCCCCCCCACCCGCTCCCAAGGAGTCCCCGTTCTC
CATCAAGAACCTGCTCAACGGAGACCACCACCGGCCGCCCCCTAAGCCTCAGCCGCCCCC
ACGGACGCTCTTCGCGCCAGCCTCGGCTGCCGCCGCCGCCGCCGCTGCCGCTGCCGCGGC
GGCCAAGGGGGCCCTGGAGGGCGCCGCGGGCTTCGCGCTCTCGCAGGTGGGCGACCTGGC
TTTCCCTCGCTTTGAGATCCCGGCGCAGAGGTTTGCCCTGCCCGCGCACTACCTGGAGCG
CTCCCCAGCCTGGTGGTACCCCTACACCCTGACCCCCGCCGGCGGCCACCTCCCGCGACC
TGAAGCCTCGGAGAAGGCCTTGCTGAGAGACTCCTCCCCCGCCTCCGGCACAGACCGCGA
CTCTCCGGAGCCACTGCTCAAGGCCGACCCCGATCACAAGGAGCTGGACTCCAAGAGCCC
GGACGAGATCATTCTGGAGGAGAGCGACTCCGAGGAAAGCAAAAAGGAAGGCGAAGCGGC
GCCAGGCGCGGCCGGGGCGAGCGTAGGGGCGGCGGCGGCCACTCCGGGCGCAGAAGACTG
GAAGAAGGGCGCTGAAAGTCCAGAGAAGAAGCCGGCGTGCCGCAAGAAGAAGACGCGCAC
AGTCTTCTCGCGCAGCCAGGTCTTCCAGCTCGAGTCCACCTTCGACATGAAGCGCTATCT
GAGCAGCTCGGAGCGAGCCGGCCTGGCCGCGTCCCTGCACCTCACCGAGACGCAGGTCAA
GATCTGGTTCCAGAACCGCCGCAACAAGTGGAAGCGGCAGCTGGCGGCGGAGCTGGAGGC
GGCCAACCTGAGCCATGCCGCGGCGCAGCGCATCGTGCGGGTGCCCATCCTCTACCACGA
GAACTCGGCGGCCGAGGGCGCGGCGGCTGCAGCCGCGGGGGCCCCGGTGCCAGTCAGCCA
GCCGCTGCTCACCTTCCCGCACCCCGTCTACTACTCGCACCCGGTGGTCTCTTCCGTGCC
GCTGCTACGGCCGGTCGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTC
GACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGG
CTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGAC
ATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGC
TTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAA
CAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAG
GTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTC
TTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAG
CACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTT
CGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTAT
CCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATG
AGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTT
TTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGA
GTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAA
GAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGT
ATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTT
GAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGC
AGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGA
GGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGAT
CGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCT
GTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCC
CGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCG
GCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGC
GGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACG
ACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCA
CTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTC
ACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGT
GAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCC
ATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAA
ACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTC
CTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGG
CGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGC
TGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATC
GTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACA
GGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACT
ACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCG
GAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTT
TTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCT
TTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGA
GATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACG
CTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAG
TGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATC
AGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGT
GATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTA
CTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCG
TAGAGGATCGAGATCT