OR1J4 ORF clone FXC11343

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Flexi ORF Clone FXC11343

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Clone info.

Species

human

Clone Name

pF1KE0890 Sequence (with vector) Restriction Map

Product ID

FXC11343

HaloTag Clone PID

FHC11343

ORF Sequence

DNA sequence (939 bp)
Protein sequence (313 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB529305]

Gene

KIEE0890

Symbol

OR1J4

Alias : HSHTPCRX01, HTPCRX01, OR9-21

Description

olfactory receptor, family 1, subfamily J, member 4

Original Clone ID

cp01290

Features of the cloned ORF sequence

Description

Length: 939 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 313 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS35122.1 2.7e-77 100.0 OR1J4 CCDS35121.1 7.3e-61 77.9 OR1J2 CCDS35120.1 5.6e-59 73.5 OR1J1 CCDS11024.1 1e-48 62.5 OR1E1 CCDS10496.1 8.9e-46 60.3 OR1F1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 26 50 PR00237 GPCR IPR000276 59 80 PR00237 GPCR IPR000725 92 103 PR00245 Olfactory receptor IPR000276 104 126 PR00237 GPCR IPR000725 129 141 PR00245 Olfactory receptor IPR000725 176 192 PR00245 Olfactory receptor IPR000276 199 222 PR00237 GPCR IPR000725 236 245 PR00245 Olfactory receptor IPR000276 272 298 PR00237 GPCR IPR000725 283 294 PR00245 Olfactory receptor HMMPfam IPR000276 41 290 PF00001 GPCR ProfileScan IPR017452 41 290 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 27 FFTLFLGMYLITVLGNLLIILLI 49 PRIMARY 23 2 63 LSHLALTDISLSSVTVPKMLLSM 85 SECONDARY 23 3 91 SILYAGCVTQMYFFIFFTDLDNF 113 SECONDARY 23 4 141 CNLLVTVSWILSCTNALSHTLLL 163 SECONDARY 23 5 177 FFCDLVALLKLSCSDISLNELVI 199 SECONDARY 23 6 206 VITLPLICILISYGHIGVTILKA 228 PRIMARY 23 7 240 TCGSHLSVVSLYYGTIIGLYFLP 262 SECONDARY 23 8 270 KDVIASVMYTVITPLLNPFIYSL 292 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_011520809 312 603232 60.3 98.1 NP_036492 312 603232 60.3 98.1 XP_011520808 322 603232 60.3 98.1 NP_001005191 312 611538 53.9 98.4 NP_002539 312 164342 49.5 96.8 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0890 Download

>KIEE0890  939 bp
ATGAAGAGGGAGAATCAGAGCAGTGTGTCTGAGTTCCTCCTCCTGGACCTCCCCATCTGG
CCAGAGCAGCAGGCTGTGTTCTTCACCCTGTTCTTGGGCATGTACCTGATCACGGTGCTG
GGGAACCTGCTCATCATCCTGCTCATCCGGCTGGACTCTCACCTTCACACCCCCATGTTC
TTCTTCCTCAGCCACTTGGCTCTCACTGACATCTCCCTTTCATCTGTCACTGTCCCAAAG
ATGTTATTAAGCATGCAAACTCAGGATCAATCCATTCTTTATGCAGGGTGTGTAACTCAG
ATGTATTTTTTCATATTTTTCACTGATCTAGACAATTTCCTTCTCACTTCAATGGCATAC
GATCGGTATGTGGCCATCTGTCACCCCCTCCGCTACACCACTATCATGAAAGAGGGACTG
TGTAACTTACTAGTCACTGTGTCCTGGATCCTCTCCTGTACCAATGCCCTGTCTCACACT
CTCCTCCTGGCCCAGCTGTCCTTTTGTGCTGACAACACCATCCCCCATTTCTTCTGTGAT
CTTGTTGCCCTACTCAAGCTCTCATGCTCAGACATCTCCCTCAATGAGCTGGTCATTTTC
ACAGTGGGACAGGCAGTCATTACTCTACCACTAATATGCATCTTGATCTCTTATGGCCAC
ATTGGGGTCACCATCCTCAAGGCTCCATCTACTAAGGGCATCTTCAAAGCTTTGTCCACC
TGTGGCTCTCACCTCTCTGTGGTGTCTCTGTATTATGGCACAATTATTGGACTGTATTTT
CTCCCCTCATCCAGTGCCTCCAGTGACAAGGACGTAATTGCCTCTGTGATGTACACGGTG
ATCACCCCATTGCTGAATCCCTTCATTTATAGCCTAAGGAACAGGGACATAAAGGGAGCC
CTGGAGAGACTCTTCAACAGGGCAACAGTCTTATCTCAA

ORF Protein

Cloned ORF protein sequence for pF1KE0890 Download

>KIEE0890  313 aa
MKRENQSSVSEFLLLDLPIWPEQQAVFFTLFLGMYLITVLGNLLIILLIRLDSHLHTPMF
FFLSHLALTDISLSSVTVPKMLLSMQTQDQSILYAGCVTQMYFFIFFTDLDNFLLTSMAY
DRYVAICHPLRYTTIMKEGLCNLLVTVSWILSCTNALSHTLLLAQLSFCADNTIPHFFCD
LVALLKLSCSDISLNELVIFTVGQAVITLPLICILISYGHIGVTILKAPSTKGIFKALST
CGSHLSVVSLYYGTIIGLYFLPSSSASSDKDVIASVMYTVITPLLNPFIYSLRNRDIKGA
LERLFNRATVLSQ

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0890 Download

>pF1KE0890  4052 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGAAGAGGGAG
AATCAGAGCAGTGTGTCTGAGTTCCTCCTCCTGGACCTCCCCATCTGGCCAGAGCAGCAG
GCTGTGTTCTTCACCCTGTTCTTGGGCATGTACCTGATCACGGTGCTGGGGAACCTGCTC
ATCATCCTGCTCATCCGGCTGGACTCTCACCTTCACACCCCCATGTTCTTCTTCCTCAGC
CACTTGGCTCTCACTGACATCTCCCTTTCATCTGTCACTGTCCCAAAGATGTTATTAAGC
ATGCAAACTCAGGATCAATCCATTCTTTATGCAGGGTGTGTAACTCAGATGTATTTTTTC
ATATTTTTCACTGATCTAGACAATTTCCTTCTCACTTCAATGGCATACGATCGGTATGTG
GCCATCTGTCACCCCCTCCGCTACACCACTATCATGAAAGAGGGACTGTGTAACTTACTA
GTCACTGTGTCCTGGATCCTCTCCTGTACCAATGCCCTGTCTCACACTCTCCTCCTGGCC
CAGCTGTCCTTTTGTGCTGACAACACCATCCCCCATTTCTTCTGTGATCTTGTTGCCCTA
CTCAAGCTCTCATGCTCAGACATCTCCCTCAATGAGCTGGTCATTTTCACAGTGGGACAG
GCAGTCATTACTCTACCACTAATATGCATCTTGATCTCTTATGGCCACATTGGGGTCACC
ATCCTCAAGGCTCCATCTACTAAGGGCATCTTCAAAGCTTTGTCCACCTGTGGCTCTCAC
CTCTCTGTGGTGTCTCTGTATTATGGCACAATTATTGGACTGTATTTTCTCCCCTCATCC
AGTGCCTCCAGTGACAAGGACGTAATTGCCTCTGTGATGTACACGGTGATCACCCCATTG
CTGAATCCCTTCATTTATAGCCTAAGGAACAGGGACATAAAGGGAGCCCTGGAGAGACTC
TTCAACAGGGCAACAGTCTTATCTCAAGTTTAAACGAATTCGAGCTCGGTACCCGGGGAT
CCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGA
AGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAA
ACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCA
TAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTT
TGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCA
CCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGA
GTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTT
GGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGG
GGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGA
TTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAA
CAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTT
CTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGG
CTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAA
GCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCAC
CTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTT
GATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACT
CGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCG
CCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTG
ACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTC
ATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGT
GATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATC
GCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCG
GGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAA
GGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAA
AGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCT
CCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGAC
AGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCC
GACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTC
TCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTG
TGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGA
GTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAG
CAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTA
CACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAG
AGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTG
CAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTAC
GGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATC
AAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATG
GCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGT
AATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCG
ATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCG
CTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTG
CCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGA
TCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACA
GAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGT
GAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCA
GGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTT
TGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGA
AGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTA
AGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTT
TTCTAAATACATTCAAATATGTATCCGCTCAT