OR1J4 ORF clone FHC11343

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC11343

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Clone info.

Species

human

Clone Name

pFN21AE0890 Sequence (with vector) Restriction Map

Product ID

FHC11343

Flexi Clone PID

FXC11343

ORF Sequence

DNA sequence (939 bp)
Protein sequence (313 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB529305]

Gene

KIEE0890

Symbol

OR1J4

Alias : HSHTPCRX01, HTPCRX01, OR9-21

Description

olfactory receptor, family 1, subfamily J, member 4

Original Clone ID

cp01290

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 939 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 313 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS35122.1 2.7e-77 100.0 OR1J4 CCDS35121.1 7.3e-61 77.9 OR1J2 CCDS35120.1 5.6e-59 73.5 OR1J1 CCDS11024.1 1e-48 62.5 OR1E1 CCDS10496.1 8.9e-46 60.3 OR1F1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 26 50 PR00237 GPCR IPR000276 59 80 PR00237 GPCR IPR000725 92 103 PR00245 Olfactory receptor IPR000276 104 126 PR00237 GPCR IPR000725 129 141 PR00245 Olfactory receptor IPR000725 176 192 PR00245 Olfactory receptor IPR000276 199 222 PR00237 GPCR IPR000725 236 245 PR00245 Olfactory receptor IPR000276 272 298 PR00237 GPCR IPR000725 283 294 PR00245 Olfactory receptor HMMPfam IPR000276 41 290 PF00001 GPCR ProfileScan IPR017452 41 290 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 27 FFTLFLGMYLITVLGNLLIILLI 49 PRIMARY 23 2 63 LSHLALTDISLSSVTVPKMLLSM 85 SECONDARY 23 3 91 SILYAGCVTQMYFFIFFTDLDNF 113 SECONDARY 23 4 141 CNLLVTVSWILSCTNALSHTLLL 163 SECONDARY 23 5 177 FFCDLVALLKLSCSDISLNELVI 199 SECONDARY 23 6 206 VITLPLICILISYGHIGVTILKA 228 PRIMARY 23 7 240 TCGSHLSVVSLYYGTIIGLYFLP 262 SECONDARY 23 8 270 KDVIASVMYTVITPLLNPFIYSL 292 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_011520809 312 603232 60.3 98.1 NP_036492 312 603232 60.3 98.1 XP_011520808 322 603232 60.3 98.1 NP_001005191 312 611538 53.9 98.4 NP_002539 312 164342 49.5 96.8 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE0890 Download

>KIEE0890  939 bp
ATGAAGAGGGAGAATCAGAGCAGTGTGTCTGAGTTCCTCCTCCTGGACCTCCCCATCTGG
CCAGAGCAGCAGGCTGTGTTCTTCACCCTGTTCTTGGGCATGTACCTGATCACGGTGCTG
GGGAACCTGCTCATCATCCTGCTCATCCGGCTGGACTCTCACCTTCACACCCCCATGTTC
TTCTTCCTCAGCCACTTGGCTCTCACTGACATCTCCCTTTCATCTGTCACTGTCCCAAAG
ATGTTATTAAGCATGCAAACTCAGGATCAATCCATTCTTTATGCAGGGTGTGTAACTCAG
ATGTATTTTTTCATATTTTTCACTGATCTAGACAATTTCCTTCTCACTTCAATGGCATAC
GATCGGTATGTGGCCATCTGTCACCCCCTCCGCTACACCACTATCATGAAAGAGGGACTG
TGTAACTTACTAGTCACTGTGTCCTGGATCCTCTCCTGTACCAATGCCCTGTCTCACACT
CTCCTCCTGGCCCAGCTGTCCTTTTGTGCTGACAACACCATCCCCCATTTCTTCTGTGAT
CTTGTTGCCCTACTCAAGCTCTCATGCTCAGACATCTCCCTCAATGAGCTGGTCATTTTC
ACAGTGGGACAGGCAGTCATTACTCTACCACTAATATGCATCTTGATCTCTTATGGCCAC
ATTGGGGTCACCATCCTCAAGGCTCCATCTACTAAGGGCATCTTCAAAGCTTTGTCCACC
TGTGGCTCTCACCTCTCTGTGGTGTCTCTGTATTATGGCACAATTATTGGACTGTATTTT
CTCCCCTCATCCAGTGCCTCCAGTGACAAGGACGTAATTGCCTCTGTGATGTACACGGTG
ATCACCCCATTGCTGAATCCCTTCATTTATAGCCTAAGGAACAGGGACATAAAGGGAGCC
CTGGAGAGACTCTTCAACAGGGCAACAGTCTTATCTCAA

ORF Protein

Cloned ORF protein sequence for pFN21AE0890 Download

>KIEE0890  313 aa
MKRENQSSVSEFLLLDLPIWPEQQAVFFTLFLGMYLITVLGNLLIILLIRLDSHLHTPMF
FFLSHLALTDISLSSVTVPKMLLSMQTQDQSILYAGCVTQMYFFIFFTDLDNFLLTSMAY
DRYVAICHPLRYTTIMKEGLCNLLVTVSWILSCTNALSHTLLLAQLSFCADNTIPHFFCD
LVALLKLSCSDISLNELVIFTVGQAVITLPLICILISYGHIGVTILKAPSTKGIFKALST
CGSHLSVVSLYYGTIIGLYFLPSSSASSDKDVIASVMYTVITPLLNPFIYSLRNRDIKGA
LERLFNRATVLSQ

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE0890 Download

>pFN21AE0890  5644 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGAAGAGGGAGAATCAGAGCAGTGTGTCTGAGTT
CCTCCTCCTGGACCTCCCCATCTGGCCAGAGCAGCAGGCTGTGTTCTTCACCCTGTTCTT
GGGCATGTACCTGATCACGGTGCTGGGGAACCTGCTCATCATCCTGCTCATCCGGCTGGA
CTCTCACCTTCACACCCCCATGTTCTTCTTCCTCAGCCACTTGGCTCTCACTGACATCTC
CCTTTCATCTGTCACTGTCCCAAAGATGTTATTAAGCATGCAAACTCAGGATCAATCCAT
TCTTTATGCAGGGTGTGTAACTCAGATGTATTTTTTCATATTTTTCACTGATCTAGACAA
TTTCCTTCTCACTTCAATGGCATACGATCGGTATGTGGCCATCTGTCACCCCCTCCGCTA
CACCACTATCATGAAAGAGGGACTGTGTAACTTACTAGTCACTGTGTCCTGGATCCTCTC
CTGTACCAATGCCCTGTCTCACACTCTCCTCCTGGCCCAGCTGTCCTTTTGTGCTGACAA
CACCATCCCCCATTTCTTCTGTGATCTTGTTGCCCTACTCAAGCTCTCATGCTCAGACAT
CTCCCTCAATGAGCTGGTCATTTTCACAGTGGGACAGGCAGTCATTACTCTACCACTAAT
ATGCATCTTGATCTCTTATGGCCACATTGGGGTCACCATCCTCAAGGCTCCATCTACTAA
GGGCATCTTCAAAGCTTTGTCCACCTGTGGCTCTCACCTCTCTGTGGTGTCTCTGTATTA
TGGCACAATTATTGGACTGTATTTTCTCCCCTCATCCAGTGCCTCCAGTGACAAGGACGT
AATTGCCTCTGTGATGTACACGGTGATCACCCCATTGCTGAATCCCTTCATTTATAGCCT
AAGGAACAGGGACATAAAGGGAGCCCTGGAGAGACTCTTCAACAGGGCAACAGTCTTATC
TCAAGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCA
TGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCG
CTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATAC
ATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAA
ATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAAC
AACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGC
AAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCG
TTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGC
GGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTG
CGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGA
CAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACAT
TTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCA
GAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATC
GAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCA
ATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGG
CAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCA
GTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATA
ACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAG
CTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCG
GAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCA
ACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTA
ATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCT
GGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCA
GCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAG
GCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCAT
TGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGG
TAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCC
AGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCC
CCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGAC
TATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCC
TGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATA
GCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGC
ACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCA
ACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAG
CGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTA
GAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTG
GTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGC
AGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGT
CTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAA
GGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCT
TCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGT
GGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGC
GGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAA
CGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTC
GTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAG
ATCT