SCML4 ORF clone FHC03836

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC03836

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Clone info.

Species

human

Clone Name

pFN21AB0926 Sequence (with vector) Restriction Map

Product ID

FHC03836

Flexi Clone PID

FXC03836

ORF Sequence

DNA sequence (1068 bp)
Protein sequence (356 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527909]

Gene

KIBB0926

Symbol

SCML4

Alias : dJ47M23.1

Description

sex comb on midleg-like 4 (Drosophila), transcript variant 2

Original Clone ID

cs02026

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1068 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 356 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS69163.1 6.8e-102 100.0 SCML4 CCDS5060.2 7.7e-102 100.0 SCML4 CCDS75500.1 2.7e-47 100.0 SCML4 CCDS53303.1 3.1e-23 51.0 SCMH1 CCDS53301.1 3.6e-23 51.0 SCMH1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR021987 35 149 PF12140 Protein of unknown function DUF3588 IPR021129 286 352 PF00536 Sterile alpha motif HMMSmart IPR001660 285 354 SM00454 Sterile alpha motif domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_016856199 466 616396 51.0 100.0 XP_016856198 470 616396 51.0 100.0 NP_001165693 480 616396 51.0 100.0 XP_016856196 480 616396 51.0 100.0 XP_016856195 488 616396 49.9 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB0926 Download

>KIBB0926  1068 bp
ATGACTCCCTTAGCCCTCTCACCTCCGCGGAGTACCCCAGAGCCCGACCTCAGCTCCATC
CCTCAGGACGCAGCCACGGTCCCCAGCTTGGCGGCCCCACAGGCTCTCACAGTCTGCCTC
TACATCAACAAGCAGGCCAATGCGGGGCCCTATCTGGAGAGGAAGAAGGTGCAGCAGCTC
CCGGAGCATTTTGGGCCCGAGCGGCCATCGGCGGTGCTGCAGCAGGCCGTCCAAGCCTGC
ATCGACTGCGCCCACCAGCAGAAGCTGGTCTTCTCCCTGGTCAAGCAGGGCTATGGTGGT
GAGATGGTGTCAGTCTCGGCTTCCTTTGATGGCAAACAGCACCTGCGGAGCCTGCCTGTG
GTGAACAGCATCGGCTATGTCCTCCGCTTCCTCGCCAAGCTGTGCCGAAGCCTCCTGTGC
GATGACCTCTTCAGCCACCAGCCCTTCCCCAGGGGCTGCAGTGCCTCTGAGAAAGTCCAG
GAGAAAGAGGAAGGGAGGATGGAATCAGTCAAGACAGTCACCACCGAAGAGTACCTGGTG
AACCCTGTGGGCATGAACCGCTACAGCGTGGACACCTCCGCCTCCACCTTTAACCACAGG
GGCTCCTTGCACCCCTCCTCCTCGCTGTACTGCAAGAGGCAGAACTCTGGAGACAGCCAC
CTTGGGGGTGGTCCTGCTGCCACCGCTGGTGGTCCCCGCACTAGCCCCATGTCTTCTGGT
GGCCCCTCGGCACCTGGGCTGAGGCCTCCAGCCTCCAGCCCCAAGAGAAACACGACCTCT
CTTGAAGGAAACAGATGTGCCTCAAGCCCTTCTCAGGATGCGCAGGATGCCAGGCGGCCA
CGGAGCAGGAACCCCTCCGCCTGGACTGTGGAGGACGTGGTGTGGTTTGTGAAGGACGCC
GACCCACAGGCTCTGGGGCCTCACGTGGAGCTCTTCAGAAAGCACGAGATTGATGGCAAC
GCTCTGCTGTTGCTGAAGAGTGACATGGTCATGAAGTACCTGGGCCTGAAGCTGGGACCC
GCACTGAAACTCTGCTACCACATTGACAAACTGAAGCAAGCCAAGTTC

ORF Protein

Cloned ORF protein sequence for pFN21AB0926 Download

>KIBB0926  356 aa
MTPLALSPPRSTPEPDLSSIPQDAATVPSLAAPQALTVCLYINKQANAGPYLERKKVQQL
PEHFGPERPSAVLQQAVQACIDCAHQQKLVFSLVKQGYGGEMVSVSASFDGKQHLRSLPV
VNSIGYVLRFLAKLCRSLLCDDLFSHQPFPRGCSASEKVQEKEEGRMESVKTVTTEEYLV
NPVGMNRYSVDTSASTFNHRGSLHPSSSLYCKRQNSGDSHLGGGPAATAGGPRTSPMSSG
GPSAPGLRPPASSPKRNTTSLEGNRCASSPSQDAQDARRPRSRNPSAWTVEDVVWFVKDA
DPQALGPHVELFRKHEIDGNALLLLKSDMVMKYLGLKLGPALKLCYHIDKLKQAKF

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB0926 Download

>pFN21AB0926  5773 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGACTCCCTTAGCCCTCTCACCTCCGCGGAGTAC
CCCAGAGCCCGACCTCAGCTCCATCCCTCAGGACGCAGCCACGGTCCCCAGCTTGGCGGC
CCCACAGGCTCTCACAGTCTGCCTCTACATCAACAAGCAGGCCAATGCGGGGCCCTATCT
GGAGAGGAAGAAGGTGCAGCAGCTCCCGGAGCATTTTGGGCCCGAGCGGCCATCGGCGGT
GCTGCAGCAGGCCGTCCAAGCCTGCATCGACTGCGCCCACCAGCAGAAGCTGGTCTTCTC
CCTGGTCAAGCAGGGCTATGGTGGTGAGATGGTGTCAGTCTCGGCTTCCTTTGATGGCAA
ACAGCACCTGCGGAGCCTGCCTGTGGTGAACAGCATCGGCTATGTCCTCCGCTTCCTCGC
CAAGCTGTGCCGAAGCCTCCTGTGCGATGACCTCTTCAGCCACCAGCCCTTCCCCAGGGG
CTGCAGTGCCTCTGAGAAAGTCCAGGAGAAAGAGGAAGGGAGGATGGAATCAGTCAAGAC
AGTCACCACCGAAGAGTACCTGGTGAACCCTGTGGGCATGAACCGCTACAGCGTGGACAC
CTCCGCCTCCACCTTTAACCACAGGGGCTCCTTGCACCCCTCCTCCTCGCTGTACTGCAA
GAGGCAGAACTCTGGAGACAGCCACCTTGGGGGTGGTCCTGCTGCCACCGCTGGTGGTCC
CCGCACTAGCCCCATGTCTTCTGGTGGCCCCTCGGCACCTGGGCTGAGGCCTCCAGCCTC
CAGCCCCAAGAGAAACACGACCTCTCTTGAAGGAAACAGATGTGCCTCAAGCCCTTCTCA
GGATGCGCAGGATGCCAGGCGGCCACGGAGCAGGAACCCCTCCGCCTGGACTGTGGAGGA
CGTGGTGTGGTTTGTGAAGGACGCCGACCCACAGGCTCTGGGGCCTCACGTGGAGCTCTT
CAGAAAGCACGAGATTGATGGCAACGCTCTGCTGTTGCTGAAGAGTGACATGGTCATGAA
GTACCTGGGCCTGAAGCTGGGACCCGCACTGAAACTCTGCTACCACATTGACAAACTGAA
GCAAGCCAAGTTCGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGAC
CTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTG
CTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATG
ATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTT
ATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAA
GTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTT
TTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTT
GCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCAC
CGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGG
GGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCG
CTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGT
ATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTT
GCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTG
GGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAA
CGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATT
GACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAG
TACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGT
GCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGA
CCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGT
TGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTA
GCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGG
CAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCC
CTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGT
ATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACG
GGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTG
ATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACT
CAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAG
CAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATA
GGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACC
CGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTG
TTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGC
TTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGG
GCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTC
TTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGA
TTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACG
GCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAA
AAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTG
TTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTT
CTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGAT
TATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTG
GATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGG
GGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGG
CGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGAT
CGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTG
TCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAG
AGGATCGAGATCT