SCML4 ORF clone FXC03836

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Flexi ORF Clone FXC03836

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Clone info.

Species

human

Clone Name

pF1KB0926 Sequence (with vector) Restriction Map

Product ID

FXC03836

HaloTag Clone PID

FHC03836

ORF Sequence

DNA sequence (1068 bp)
Protein sequence (356 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527909]

Gene

KIBB0926

Symbol

SCML4

Alias : dJ47M23.1

Description

sex comb on midleg-like 4 (Drosophila), transcript variant 2

Original Clone ID

cs02026

Features of the cloned ORF sequence

Description

Length: 1068 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 356 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS69163.1 6.8e-102 100.0 SCML4 CCDS5060.2 7.7e-102 100.0 SCML4 CCDS75500.1 2.7e-47 100.0 SCML4 CCDS53303.1 3.1e-23 51.0 SCMH1 CCDS53301.1 3.6e-23 51.0 SCMH1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR021987 35 149 PF12140 Protein of unknown function DUF3588 IPR021129 286 352 PF00536 Sterile alpha motif HMMSmart IPR001660 285 354 SM00454 Sterile alpha motif domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_016856199 466 616396 51.0 100.0 XP_016856198 470 616396 51.0 100.0 NP_001165693 480 616396 51.0 100.0 XP_016856196 480 616396 51.0 100.0 XP_016856195 488 616396 49.9 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB0926 Download

>KIBB0926  1068 bp
ATGACTCCCTTAGCCCTCTCACCTCCGCGGAGTACCCCAGAGCCCGACCTCAGCTCCATC
CCTCAGGACGCAGCCACGGTCCCCAGCTTGGCGGCCCCACAGGCTCTCACAGTCTGCCTC
TACATCAACAAGCAGGCCAATGCGGGGCCCTATCTGGAGAGGAAGAAGGTGCAGCAGCTC
CCGGAGCATTTTGGGCCCGAGCGGCCATCGGCGGTGCTGCAGCAGGCCGTCCAAGCCTGC
ATCGACTGCGCCCACCAGCAGAAGCTGGTCTTCTCCCTGGTCAAGCAGGGCTATGGTGGT
GAGATGGTGTCAGTCTCGGCTTCCTTTGATGGCAAACAGCACCTGCGGAGCCTGCCTGTG
GTGAACAGCATCGGCTATGTCCTCCGCTTCCTCGCCAAGCTGTGCCGAAGCCTCCTGTGC
GATGACCTCTTCAGCCACCAGCCCTTCCCCAGGGGCTGCAGTGCCTCTGAGAAAGTCCAG
GAGAAAGAGGAAGGGAGGATGGAATCAGTCAAGACAGTCACCACCGAAGAGTACCTGGTG
AACCCTGTGGGCATGAACCGCTACAGCGTGGACACCTCCGCCTCCACCTTTAACCACAGG
GGCTCCTTGCACCCCTCCTCCTCGCTGTACTGCAAGAGGCAGAACTCTGGAGACAGCCAC
CTTGGGGGTGGTCCTGCTGCCACCGCTGGTGGTCCCCGCACTAGCCCCATGTCTTCTGGT
GGCCCCTCGGCACCTGGGCTGAGGCCTCCAGCCTCCAGCCCCAAGAGAAACACGACCTCT
CTTGAAGGAAACAGATGTGCCTCAAGCCCTTCTCAGGATGCGCAGGATGCCAGGCGGCCA
CGGAGCAGGAACCCCTCCGCCTGGACTGTGGAGGACGTGGTGTGGTTTGTGAAGGACGCC
GACCCACAGGCTCTGGGGCCTCACGTGGAGCTCTTCAGAAAGCACGAGATTGATGGCAAC
GCTCTGCTGTTGCTGAAGAGTGACATGGTCATGAAGTACCTGGGCCTGAAGCTGGGACCC
GCACTGAAACTCTGCTACCACATTGACAAACTGAAGCAAGCCAAGTTC

ORF Protein

Cloned ORF protein sequence for pF1KB0926 Download

>KIBB0926  356 aa
MTPLALSPPRSTPEPDLSSIPQDAATVPSLAAPQALTVCLYINKQANAGPYLERKKVQQL
PEHFGPERPSAVLQQAVQACIDCAHQQKLVFSLVKQGYGGEMVSVSASFDGKQHLRSLPV
VNSIGYVLRFLAKLCRSLLCDDLFSHQPFPRGCSASEKVQEKEEGRMESVKTVTTEEYLV
NPVGMNRYSVDTSASTFNHRGSLHPSSSLYCKRQNSGDSHLGGGPAATAGGPRTSPMSSG
GPSAPGLRPPASSPKRNTTSLEGNRCASSPSQDAQDARRPRSRNPSAWTVEDVVWFVKDA
DPQALGPHVELFRKHEIDGNALLLLKSDMVMKYLGLKLGPALKLCYHIDKLKQAKF

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB0926 Download

>pF1KB0926  4181 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGACTCCCTTA
GCCCTCTCACCTCCGCGGAGTACCCCAGAGCCCGACCTCAGCTCCATCCCTCAGGACGCA
GCCACGGTCCCCAGCTTGGCGGCCCCACAGGCTCTCACAGTCTGCCTCTACATCAACAAG
CAGGCCAATGCGGGGCCCTATCTGGAGAGGAAGAAGGTGCAGCAGCTCCCGGAGCATTTT
GGGCCCGAGCGGCCATCGGCGGTGCTGCAGCAGGCCGTCCAAGCCTGCATCGACTGCGCC
CACCAGCAGAAGCTGGTCTTCTCCCTGGTCAAGCAGGGCTATGGTGGTGAGATGGTGTCA
GTCTCGGCTTCCTTTGATGGCAAACAGCACCTGCGGAGCCTGCCTGTGGTGAACAGCATC
GGCTATGTCCTCCGCTTCCTCGCCAAGCTGTGCCGAAGCCTCCTGTGCGATGACCTCTTC
AGCCACCAGCCCTTCCCCAGGGGCTGCAGTGCCTCTGAGAAAGTCCAGGAGAAAGAGGAA
GGGAGGATGGAATCAGTCAAGACAGTCACCACCGAAGAGTACCTGGTGAACCCTGTGGGC
ATGAACCGCTACAGCGTGGACACCTCCGCCTCCACCTTTAACCACAGGGGCTCCTTGCAC
CCCTCCTCCTCGCTGTACTGCAAGAGGCAGAACTCTGGAGACAGCCACCTTGGGGGTGGT
CCTGCTGCCACCGCTGGTGGTCCCCGCACTAGCCCCATGTCTTCTGGTGGCCCCTCGGCA
CCTGGGCTGAGGCCTCCAGCCTCCAGCCCCAAGAGAAACACGACCTCTCTTGAAGGAAAC
AGATGTGCCTCAAGCCCTTCTCAGGATGCGCAGGATGCCAGGCGGCCACGGAGCAGGAAC
CCCTCCGCCTGGACTGTGGAGGACGTGGTGTGGTTTGTGAAGGACGCCGACCCACAGGCT
CTGGGGCCTCACGTGGAGCTCTTCAGAAAGCACGAGATTGATGGCAACGCTCTGCTGTTG
CTGAAGAGTGACATGGTCATGAAGTACCTGGGCCTGAAGCTGGGACCCGCACTGAAACTC
TGCTACCACATTGACAAACTGAAGCAAGCCAAGTTCGTTTAAACGAATTCGAGCTCGGTA
CCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGC
CCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGG
GGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCT
TGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTG
CTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCG
GGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTT
GCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCT
GGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGA
TGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAA
CAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGAC
TGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGG
CGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAG
GCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTT
GTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTG
TCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTG
CATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGA
GCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAG
GGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGAT
CTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTT
TCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTG
GCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTT
TACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTC
TTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGC
TCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACAT
GTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTT
CCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCG
AAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTC
TCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGT
GGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAA
GCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTA
TCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAA
CAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAA
CTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTT
CGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTT
TTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGAT
CTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCAT
GAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCA
CGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTA
AGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTA
TCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCC
GTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACT
TACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGG
CGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCT
GATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAA
CTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGG
GAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTA
TCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGA
ACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGC
ATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTT
TGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT