LGI2 ORF clone FXC00949

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Flexi ORF Clone FXC00949

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Clone info.

Species

human

Clone Name

pF1KSDA1916 Sequence (with vector) Restriction Map

Product ID

FXC00949

HaloTag Clone PID

FHC00949

ORF Sequence

DNA sequence (1635 bp)
Protein sequence (545 aa)

Linker Type

Flexi_RBS type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB384324]

Gene

KIAA1916

Symbol

LGI2

Alias : LGIL2

Description

leucine-rich repeat LGI family, member 2

Original Clone ID

hg01117

Features of the cloned ORF sequence

Description

Length: 1635 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 545 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS3431.1 2.1e-200 99.8 LGI2 CCDS7431.1 5.6e-115 56.1 LGI1 CCDS6025.1 5.3e-108 51.7 LGI3 CCDS81490.1 1.6e-92 50.2 LGI1 CCDS12444.1 6e-79 41.2 LGI4 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001611 110 132 PF00560 Leucine-rich repeat IPR001611 135 156 PF00560 Leucine-rich repeat IPR005492 218 261 PF03736 Leucine-rich glioma-inactivated IPR005492 264 306 PF03736 Leucine-rich glioma-inactivated IPR005492 310 358 PF03736 Leucine-rich glioma-inactivated IPR005492 360 402 PF03736 Leucine-rich glioma-inactivated IPR005492 406 450 PF03736 Leucine-rich glioma-inactivated IPR005492 451 493 PF03736 Leucine-rich glioma-inactivated IPR005492 497 536 PF03736 Leucine-rich glioma-inactivated HMMSmart IPR003591 84 107 SM00369 Leucine-rich repeat IPR003591 108 131 SM00369 Leucine-rich repeat IPR003591 132 155 SM00369 Leucine-rich repeat IPR000483 167 216 SM00082 Cysteine-rich flanking region ProfileScan NULL 1 22 PS51257 NULL IPR009039 218 261 PS50912 EAR IPR009039 264 307 PS50912 EAR IPR009039 310 358 PS50912 EAR IPR009039 359 403 PS50912 EAR IPR009039 406 450 PS50912 EAR IPR009039 451 494 PS50912 EAR IPR009039 497 540 PS50912 EAR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 7 GCGALGLLLLLLGAACLIPRSAQ 29 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_060646 545 608301 99.8 100.0 NP_005088 557 600512,604619 56.1 98.0 NP_644807 548 608302 51.7 99.1 NP_001295205 509 600512,604619 50.2 98.0 NP_644813 537 608303 41.2 98.3 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KSDA1916 Download

>KIAA1916  1635 bp
ATGGCGCTGCGGAGAGGCGGCTGCGGAGCGCTCGGGCTGCTGCTGCTGCTGCTGGGCGCC
GCGTGCCTGATACCGCGGAGCGCGCAGGTGAGGCGGCTGGCGCGCTGCCCCGCCACTTGC
AGCTGTACCAAGGAGTCTATCATCTGCGTGGGCTCTTCCTGGGTGCCCAGGATCGTGCCG
GGCGACATCAGCTCCCTGAGCCTGGTAAATGGGACGTTTTCAGAAATCAAGGACCGAATG
TTTTCCCATCTGCCTTCTCTGCAGCTGCTATTGCTGAATTCTAACTCATTCACGATCATC
CGGGATGATGCTTTTGCTGGACTTTTTCATCTTGAATACCTGTTCATTGAAGGGAACAAA
ATAGAAACCATTTCAAGAAATGCCTTTCGTGGCCTCCGTGACCTGACTCACCTTTCTTTG
GCCAATAACCACATAAAAGCACTACCAAGGGATGTCTTCAGTGATTTAGACTCTCTGATT
GAACTAGATTTGAGGGGTAATAAATTTGAATGTGACTGCAAAGCCAAGTGGCTATACCTG
TGGTTGAAGATGACAAATTCCACCGTTTCTGATGTGCTGTGTATTGGTCCACCAGAGTAT
CAGGAAAAGAAGCTAAATGACGTGACCAGCTTTGACTATGAATGCACAACTACAGATTTT
GTTGTTCATCAGACTTTACCCTACCAGTCGGTTTCAGTGGATACGTTCAACTCCAAGAAC
GATGTGTACGTGGCCATCGCGCAGCCCAGCATGGAGAACTGCATGGTGCTGGAGTGGGAC
CACATTGAAATGAATTTCCGGAGCTATGACAACATTACAGGTCAGTCCATCGTGGGCTGT
AAGGCCATTCTCATCGATGATCAGGTCTTTGTGGTGGTAGCCCAGCTCTTCGGTGGCTCT
CACATTTACAAATACGACGAGAGTTGGACCAAATTTGTCAAATTCCAAGACATAGAGGTC
TCTCGCATTTCCAAGCCCAATGACATCGAGCTGTTTCAGATCGACGACGAGACGTTCTTT
GTCATCGCAGACAGCTCAAAGGCTGGTCTGTCCACAGTTTATAAATGGAACAGCAAAGGA
TTCTATTCTTACCAGTCACTGCACGAGTGGTTCAGGGACACGGATGCGGAGTTTGTTGAT
ATCGATGGAAAATCGCATCTCATCCTGTCCAGCCGCTCCCAGGTCCCCATCATCCTCCAG
TGGAATAAAAGCTCTAAGAAGTTTGTCCCCCATGGTGACATCCCCAACATGGAGGACGTA
CTGGCTGTGAAGAGCTTCCGAATGCAAAATACCCTCTACCTTTCCCTTACCCGCTTCATC
GGGGACTCCCGGGTCATGAGGTGGAACAGTAAGCAGTTTGTGGAGATCCAAGCTCTTCCA
TCCCGGGGGGCCATGACCCTGCAGCCCTTTTCTTTTAAAGATAATCACTACCTGGCCCTG
GGGAGTGACTATACATTCTCTCAGATATACCAGTGGGATAAAGAGAAGCAGCTATTCAAA
AAGTTTAAGGAGATTTATGTGCAGGCGCCTCGTTCATTCACAGCTGTCTCCACCGACAGG
AGAGATTTCCTTTTTGCATCCAGTTTCAAAGGGAAAACAAAGATTTTTGAACATATAATT
GTTGACTTAAGTTTG

ORF Protein

Cloned ORF protein sequence for pF1KSDA1916 Download

>KIAA1916  545 aa
MALRRGGCGALGLLLLLLGAACLIPRSAQVRRLARCPATCSCTKESIICVGSSWVPRIVP
GDISSLSLVNGTFSEIKDRMFSHLPSLQLLLLNSNSFTIIRDDAFAGLFHLEYLFIEGNK
IETISRNAFRGLRDLTHLSLANNHIKALPRDVFSDLDSLIELDLRGNKFECDCKAKWLYL
WLKMTNSTVSDVLCIGPPEYQEKKLNDVTSFDYECTTTDFVVHQTLPYQSVSVDTFNSKN
DVYVAIAQPSMENCMVLEWDHIEMNFRSYDNITGQSIVGCKAILIDDQVFVVVAQLFGGS
HIYKYDESWTKFVKFQDIEVSRISKPNDIELFQIDDETFFVIADSSKAGLSTVYKWNSKG
FYSYQSLHEWFRDTDAEFVDIDGKSHLILSSRSQVPIILQWNKSSKKFVPHGDIPNMEDV
LAVKSFRMQNTLYLSLTRFIGDSRVMRWNSKQFVEIQALPSRGAMTLQPFSFKDNHYLAL
GSDYTFSQIYQWDKEKQLFKKFKEIYVQAPRSFTAVSTDRRDFLFASSFKGKTKIFEHII
VDLSL

ORF+Vector

Nucleotide Sequence (with vector) for pF1KSDA1916 Download

>pF1KSDA1916  4772 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCTTTCGAAGGAGAT
AGAACCATGGCGCTGCGGAGAGGCGGCTGCGGAGCGCTCGGGCTGCTGCTGCTGCTGCTG
GGCGCCGCGTGCCTGATACCGCGGAGCGCGCAGGTGAGGCGGCTGGCGCGCTGCCCCGCC
ACTTGCAGCTGTACCAAGGAGTCTATCATCTGCGTGGGCTCTTCCTGGGTGCCCAGGATC
GTGCCGGGCGACATCAGCTCCCTGAGCCTGGTAAATGGGACGTTTTCAGAAATCAAGGAC
CGAATGTTTTCCCATCTGCCTTCTCTGCAGCTGCTATTGCTGAATTCTAACTCATTCACG
ATCATCCGGGATGATGCTTTTGCTGGACTTTTTCATCTTGAATACCTGTTCATTGAAGGG
AACAAAATAGAAACCATTTCAAGAAATGCCTTTCGTGGCCTCCGTGACCTGACTCACCTT
TCTTTGGCCAATAACCACATAAAAGCACTACCAAGGGATGTCTTCAGTGATTTAGACTCT
CTGATTGAACTAGATTTGAGGGGTAATAAATTTGAATGTGACTGCAAAGCCAAGTGGCTA
TACCTGTGGTTGAAGATGACAAATTCCACCGTTTCTGATGTGCTGTGTATTGGTCCACCA
GAGTATCAGGAAAAGAAGCTAAATGACGTGACCAGCTTTGACTATGAATGCACAACTACA
GATTTTGTTGTTCATCAGACTTTACCCTACCAGTCGGTTTCAGTGGATACGTTCAACTCC
AAGAACGATGTGTACGTGGCCATCGCGCAGCCCAGCATGGAGAACTGCATGGTGCTGGAG
TGGGACCACATTGAAATGAATTTCCGGAGCTATGACAACATTACAGGTCAGTCCATCGTG
GGCTGTAAGGCCATTCTCATCGATGATCAGGTCTTTGTGGTGGTAGCCCAGCTCTTCGGT
GGCTCTCACATTTACAAATACGACGAGAGTTGGACCAAATTTGTCAAATTCCAAGACATA
GAGGTCTCTCGCATTTCCAAGCCCAATGACATCGAGCTGTTTCAGATCGACGACGAGACG
TTCTTTGTCATCGCAGACAGCTCAAAGGCTGGTCTGTCCACAGTTTATAAATGGAACAGC
AAAGGATTCTATTCTTACCAGTCACTGCACGAGTGGTTCAGGGACACGGATGCGGAGTTT
GTTGATATCGATGGAAAATCGCATCTCATCCTGTCCAGCCGCTCCCAGGTCCCCATCATC
CTCCAGTGGAATAAAAGCTCTAAGAAGTTTGTCCCCCATGGTGACATCCCCAACATGGAG
GACGTACTGGCTGTGAAGAGCTTCCGAATGCAAAATACCCTCTACCTTTCCCTTACCCGC
TTCATCGGGGACTCCCGGGTCATGAGGTGGAACAGTAAGCAGTTTGTGGAGATCCAAGCT
CTTCCATCCCGGGGGGCCATGACCCTGCAGCCCTTTTCTTTTAAAGATAATCACTACCTG
GCCCTGGGGAGTGACTATACATTCTCTCAGATATACCAGTGGGATAAAGAGAAGCAGCTA
TTCAAAAAGTTTAAGGAGATTTATGTGCAGGCGCCTCGTTCATTCACAGCTGTCTCCACC
GACAGGAGAGATTTCCTTTTTGCATCCAGTTTCAAAGGGAAAACAAAGATTTTTGAACAT
ATAATTGTTGACTTAAGTTTGTACGTAGTTTAAACGAATTCGAGCTCGGTACCCGGGGAT
CCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGA
AGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAA
ACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCA
TAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTT
TGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCA
CCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGA
GTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTT
GGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGG
GGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGA
TTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAA
CAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTT
CTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGG
CTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAA
GCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCAC
CTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTT
GATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACT
CGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCG
CCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTG
ACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTC
ATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGT
GATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATC
GCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCG
GGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAA
GGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAA
AGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCT
CCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGAC
AGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCC
GACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTC
TCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTG
TGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGA
GTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAG
CAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTA
CACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAG
AGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTG
CAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTAC
GGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATC
AAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATG
GCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGT
AATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCG
ATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCG
CTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTG
CCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGA
TCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACA
GAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGT
GAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCA
GGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTT
TGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGA
AGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTA
AGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTT
TTCTAAATACATTCAAATATGTATCCGCTCAT