ASIC5 ORF clone FXC04023

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Flexi ORF Clone FXC04023

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Clone info.

Species

human

Clone Name

pF1KB7223 Sequence (with vector) Restriction Map

Product ID

FXC04023

HaloTag Clone PID

FHC04023

ORF Sequence

DNA sequence (1515 bp)
Protein sequence (505 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB528059]

Gene

KIBB7223

Symbol

ASIC5

Alias : ACCN5, HINAC, INAC

Description

acid sensing (proton gated) ion channel family member 5

Original Clone ID

oc00439

Features of the cloned ORF sequence

Description

Length: 1515 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 505 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS3793.1 4.2e-219 100.0 ASIC5 CCDS42296.1 6.7e-46 32.1 ASIC2 CCDS58228.1 2.3e-43 30.3 ASIC1 CCDS44876.1 4e-36 30.6 ASIC1 CCDS11276.1 4e-34 30.0 ASIC2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR001873 62 79 PR01078 Na+ channel IPR001873 102 118 PR01078 Na+ channel IPR001873 195 211 PR01078 Na+ channel IPR001873 224 242 PR01078 Na+ channel IPR001873 252 270 PR01078 Na+ channel IPR001873 310 321 PR01078 Na+ channel IPR001873 321 338 PR01078 Na+ channel IPR001873 373 393 PR01078 Na+ channel IPR001873 412 432 PR01078 Na+ channel IPR001873 432 446 PR01078 Na+ channel IPR001873 446 462 PR01078 Na+ channel HMMPfam IPR001873 41 467 PF00858 Na+ channel
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 63 VLWLVVVLGSVSLVTWQIYIRLL 85 PRIMARY 23 2 121 AVAKFGVIFFLWHIVSKVLHLQE 143 SECONDARY 23 3 437 SVSELLADLGGQLGLFCGASLIT 459 SECONDARY 23 4 465 EYLFTNFYWICIFFLLKISEMTQ 487 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_059115 505 616693 100.0 100.0 XP_016863780 463 616693 91.7 100.0 NP_001085 512 601784 32.1 84.8 NP_001243759 562 602866 30.3 84.8 NP_001086 528 602866 30.6 84.8 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB7223 Download

>KIBB7223  1515 bp
ATGGAGCAGACAGAAAAATCAAAAGTATATGCTGAGAACGGACTCTTAGAAAAGATAAAG
CTTTGCCTTTCAAAGAAACCACTGCCATCTCCCACTGAGCGAAAGAAGTTTGACCATGAC
TTTGCCATCTCCACTTCCTTTCATGGGATACACAATATTGTTCAGAACCGGAGCAAAATT
CGCAGGGTGCTCTGGTTGGTGGTGGTTCTGGGCTCAGTCTCACTTGTGACATGGCAGATC
TACATTCGCTTGCTCAACTACTTCACATGGCCAACCACAACGTCCATTGAGGTTCAATAT
GTGGAAAAGATGGAGTTCCCAGCTGTGACATTTTGTAATTTGAACAGGTTCCAAACAGAT
GCTGTAGCCAAATTTGGTGTTATTTTTTTCTTATGGCACATTGTATCCAAAGTCCTCCAT
CTTCAAGAAATTACTGCCAATTCCACTGGCTCTAGAGAGGCTACTGATTTTGCTGCAAGT
CACCAAAACTTCAGCATTGTGGAATTTATCAGGAACAAAGGTTTTTATCTCAACAATAGC
ACTTTGTTGGACTGTGAGTTTTTTGGAAAGCCATGTAGCCCAAAGGATTTTGCACATGTC
TTCACTGAATATGGAAATTGTTTTACTTTTAATCATGGTGAAACTCTCCAAGCAAAGAGA
AAAGTGAGTGTCTCTGGAAGAGGTTTGAGCTTACTCTTCAATGTGAATCAGGAGGCATTC
ACTGATAACCCAGCCCTTGGTTTCGTTGATGCTGGGATCATCTTTGTTATCCATTCACCA
AAGAAGGTGCCACAGTTTGATGGGTTAGGCTTGTTGTCACCTGTGGGAATGCACGCAAGG
GTAACCATCCGCCAAGTGAAGACAGTTCATCAAGAATACCCTTGGGGAGAATGCAATCCT
AACATCAAGCTGCAGAATTTTAGCAGCTACAGCACTTCTGGTTGCTTGAAGGAATGCAAA
GCCCAGCACATAAAAAAGCAATGTGGATGTGTGCCTTTTCTTCTTCCTGGATATGGGATA
GAATGTGACCTACAAAAGTACTTCAGCTGTGTTTCTCCTGTACTTGACCACATTGAATTT
AAGGATTTATGTACAGTAGGAACACATAACTCTAGCTGCCCCGTTTCTTGTGAAGAAATA
GAATACCCGGCCACTATTTCTTATTCCTCTTTTCCAAGTCAAAAAGCTTTGAAATATCTT
TCCAAGAAGTTGAATCAAAGCCGGAAATACATCAGGGAGAATCTTGTAAAAATTGAAATT
AACTATAGTGACCTAAACTATAAGATAACCCAGCAGCAAAAGGCGGTGAGTGTGTCTGAG
TTACTTGCAGATCTTGGTGGTCAGCTGGGTCTATTTTGTGGGGCCAGTCTGATCACGATC
ATAGAAATTATTGAATATCTATTCACCAATTTCTACTGGATATGCATTTTCTTTTTGCTG
AAGATATCTGAAATGACCCAGTGGACTCCTCCACCTCAGAATCATCTGGGAAATAAAAAT
AGGATAGAGGAGTGT

ORF Protein

Cloned ORF protein sequence for pF1KB7223 Download

>KIBB7223  505 aa
MEQTEKSKVYAENGLLEKIKLCLSKKPLPSPTERKKFDHDFAISTSFHGIHNIVQNRSKI
RRVLWLVVVLGSVSLVTWQIYIRLLNYFTWPTTTSIEVQYVEKMEFPAVTFCNLNRFQTD
AVAKFGVIFFLWHIVSKVLHLQEITANSTGSREATDFAASHQNFSIVEFIRNKGFYLNNS
TLLDCEFFGKPCSPKDFAHVFTEYGNCFTFNHGETLQAKRKVSVSGRGLSLLFNVNQEAF
TDNPALGFVDAGIIFVIHSPKKVPQFDGLGLLSPVGMHARVTIRQVKTVHQEYPWGECNP
NIKLQNFSSYSTSGCLKECKAQHIKKQCGCVPFLLPGYGIECDLQKYFSCVSPVLDHIEF
KDLCTVGTHNSSCPVSCEEIEYPATISYSSFPSQKALKYLSKKLNQSRKYIRENLVKIEI
NYSDLNYKITQQQKAVSVSELLADLGGQLGLFCGASLITIIEIIEYLFTNFYWICIFFLL
KISEMTQWTPPPQNHLGNKNRIEEC

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB7223 Download

>pF1KB7223  4628 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGAGCAGACA
GAAAAATCAAAAGTATATGCTGAGAACGGACTCTTAGAAAAGATAAAGCTTTGCCTTTCA
AAGAAACCACTGCCATCTCCCACTGAGCGAAAGAAGTTTGACCATGACTTTGCCATCTCC
ACTTCCTTTCATGGGATACACAATATTGTTCAGAACCGGAGCAAAATTCGCAGGGTGCTC
TGGTTGGTGGTGGTTCTGGGCTCAGTCTCACTTGTGACATGGCAGATCTACATTCGCTTG
CTCAACTACTTCACATGGCCAACCACAACGTCCATTGAGGTTCAATATGTGGAAAAGATG
GAGTTCCCAGCTGTGACATTTTGTAATTTGAACAGGTTCCAAACAGATGCTGTAGCCAAA
TTTGGTGTTATTTTTTTCTTATGGCACATTGTATCCAAAGTCCTCCATCTTCAAGAAATT
ACTGCCAATTCCACTGGCTCTAGAGAGGCTACTGATTTTGCTGCAAGTCACCAAAACTTC
AGCATTGTGGAATTTATCAGGAACAAAGGTTTTTATCTCAACAATAGCACTTTGTTGGAC
TGTGAGTTTTTTGGAAAGCCATGTAGCCCAAAGGATTTTGCACATGTCTTCACTGAATAT
GGAAATTGTTTTACTTTTAATCATGGTGAAACTCTCCAAGCAAAGAGAAAAGTGAGTGTC
TCTGGAAGAGGTTTGAGCTTACTCTTCAATGTGAATCAGGAGGCATTCACTGATAACCCA
GCCCTTGGTTTCGTTGATGCTGGGATCATCTTTGTTATCCATTCACCAAAGAAGGTGCCA
CAGTTTGATGGGTTAGGCTTGTTGTCACCTGTGGGAATGCACGCAAGGGTAACCATCCGC
CAAGTGAAGACAGTTCATCAAGAATACCCTTGGGGAGAATGCAATCCTAACATCAAGCTG
CAGAATTTTAGCAGCTACAGCACTTCTGGTTGCTTGAAGGAATGCAAAGCCCAGCACATA
AAAAAGCAATGTGGATGTGTGCCTTTTCTTCTTCCTGGATATGGGATAGAATGTGACCTA
CAAAAGTACTTCAGCTGTGTTTCTCCTGTACTTGACCACATTGAATTTAAGGATTTATGT
ACAGTAGGAACACATAACTCTAGCTGCCCCGTTTCTTGTGAAGAAATAGAATACCCGGCC
ACTATTTCTTATTCCTCTTTTCCAAGTCAAAAAGCTTTGAAATATCTTTCCAAGAAGTTG
AATCAAAGCCGGAAATACATCAGGGAGAATCTTGTAAAAATTGAAATTAACTATAGTGAC
CTAAACTATAAGATAACCCAGCAGCAAAAGGCGGTGAGTGTGTCTGAGTTACTTGCAGAT
CTTGGTGGTCAGCTGGGTCTATTTTGTGGGGCCAGTCTGATCACGATCATAGAAATTATT
GAATATCTATTCACCAATTTCTACTGGATATGCATTTTCTTTTTGCTGAAGATATCTGAA
ATGACCCAGTGGACTCCTCCACCTCAGAATCATCTGGGAAATAAAAATAGGATAGAGGAG
TGTGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCAT
GCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGC
TGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCT
GAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCG
CCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCA
GATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTA
CGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCA
AAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGG
ATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACA
GGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCT
TGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCC
GCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCC
GGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGC
GTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTG
GGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCC
ATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGAC
CACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGAT
CAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTC
AAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCG
AATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTG
GCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGC
GAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATC
GCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCG
ACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGA
ATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCG
TAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAA
AAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTT
TCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCT
GTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCT
CAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCC
CGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTT
ATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGC
TACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTAT
CTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAA
ACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAA
AAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGA
AAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCT
TTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACC
ATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTG
CATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTT
TGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTA
CAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACC
GCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACA
GATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGC
GGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAG
TGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTC
AGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTA
GGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGG
CAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATG
GCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTAT
CCGCTCAT