Gene/Protein Characteristic Table for KIAA1319
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Product ID ORK01159
Accession No AB037740
Description cingulin
Clone name fh13717
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (5073 bp)
Predicted protein sequence (1208 aa)
Flexi ORF Clone FXC01159
Source Human fetal brain
Rouge ID mKIAA1319 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence
Description

Length: 5073 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq No warning No warning
Integrity of 3' end
Length of 3'UTR 1344 bp
Genome contig ID gi89161185f_149657605
PolyA signal sequence
(ATTAAA,-23)
+----*----+----*----+----*----+----
TTTAAATTAAATATTAAAATTACACATTTATATTG
Flanking genome sequence
(120186 - 120235)
----+----*----+----*----+----*----+----*----+----*
AAATCCTTGGTTTGTCTTCTCATTCTTTTTCTTGGCATATTTGGAGGTCC

Ensembl ContigView (Add our DAS server as a DAS source)


Chr f/r start end exon identity class
Ensembl gnome browser 1 f 149750519 149777789 21 99.6 Perfect prediction
Features of the protein sequence
Description

Length: 1208 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
AAF74498 0 100.0 cingulin [Homo ...
Homo sapiens
Q9P2M7 0 100.0 Cingulin.
Homo sapiens
XP_513800 0 99.1 cingulin [Pan t...
Pan troglodytes
XP_001108356 0 97.3 similar to cing...
Macaca mulatta
ABY40800 0 97.5 cingulin (predi...
Papio anubis
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
Entry Exp ID% HUGE_ID
AB051536 5.8e-34 33.2 KIAA1749
AB020673 3.7e-15 27.6 KIAA0866
AB111886 5.3e-14 26.0 KIAA2034
AB040945 5.2e-09 24.2 KIAA1512
AB028975 1.2e-05 24.6 KIAA1052
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR002928 972 1142 PF01576 Myosin tail
Expression profile
Description

RT-PCR-ELISA
Experimental conditions
Primer_f TCCCAGAATCAGTTGTTGCAG
Primer_r GTCCAGTCGCTCAATTTCCTC
PCR conditions 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RH mapping information
Description

Chromosome No. 1
Experimental conditions
Panel name unigene
Primer_f -
Primer_r -
PCR product length -
PCR conditions -
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