Gene/Protein Characteristic Table for KIAA2034
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Product ID ORK06071
Accession No AB111886
Description myosin, heavy chain 14, non-muscle
Clone name ah04445
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (5472 bp)
Predicted protein sequence (1571 aa)
Source Human brain (amygdala)
Rouge ID mKIAA2034 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence
Description

Length: 5472 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq Warning No warning
Integrity of 3' end
Length of 3'UTR 755 bp
Genome contig ID gi42406306f_55344121
PolyA signal sequence
(AATAAA,-27)
+----*----+----*----+----*----+----
CTGGCAGAAATAAACTCCAACCCGACTGGACCATC
Flanking genome sequence
(161495 - 161544)
----+----*----+----*----+----*----+----*----+----*
TCTGTGGCTGTGTGTGTTCCTGCAGGGGGTCTCTGATGGGGCAGGATGGG

Ensembl ContigView (Add our DAS server as a DAS source)


Chr f/r start end exon identity class
Ensembl gnome browser 19 f 55444121 55505614 31 99.8 Perfect prediction
Features of the protein sequence
Description

Length: 1571 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
BAG06723 0 100.0 MYH14 variant p...
Homo sapiens
ABR10605 0 91.1 nonmuscle myosi...
Mus musculus
NP_079005 0 97.9 myosin, heavy c...
Homo sapiens
NP_001070654 0 97.9 myosin, heavy c...
Homo sapiens
XP_524343 0 97.9 myosin, heavy p...
Pan troglodytes
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
Entry Exp ID% HUGE_ID
AB020673 8.6e-124 59.8 KIAA0866
AB040945 1.6e-57 36.8 KIAA1512
AB023217 8.8e-50 33.1 KIAA1000
D86970 1.1e-19 26.8 KIAA0216
AB037740 5.6e-15 25.8 KIAA1319
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
FPrintScan IPR001609 16 44 PR00193 Myosin head
IPR001609 70 98 PR00193 Myosin head
HMMPfam IPR001609 3 364 PF00063 Myosin head
IPR000048 380 400 PF00612 IQ calmodulin-binding region
IPR002928 666 1523 PF01576 Myosin tail
HMMSmart IPR001609 1 377 SM00242 Myosin head
IPR000048 378 400 SM00015 IQ calmodulin-binding region
ProfileScan IPR000048 380 408 PS50096 IQ calmodulin-binding region
Experimental conditions
Primer_f
Primer_r
PCR conditions test

RH mapping information
Description

Chromosome No. 19
Experimental conditions
Panel name genbank
Primer_f -
Primer_r -
PCR product length -
PCR conditions -
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