hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-19455099/chunk_1/iprscan-20080502-19455099.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA2034 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF01576.9.fs Myosin tail 616.8 1.7e-182 3 PF01576.9.ls Myosin tail 613.8 1.4e-181 1 PF00063.11.fs Myosin head (motor domain) 595.5 4.6e-176 1 PF00063.11.ls Myosin head (motor domain) 126.7 5.9e-35 1 PF02370.7.ls M protein repeat 34.5 3.4e-07 9 PF00612.17.fs IQ calmodulin-binding motif 23.7 5.5e-06 1 PF02370.7.fs M protein repeat 26.7 5.9e-06 5 PF00612.17.ls IQ calmodulin-binding motif 25.7 0.00016 1 PF06696.2.ls Streptococcal surface antigen repeat 25.5 0.00018 6 PF08826.1.fs DMPK coiled coil domain like 17.8 0.00023 7 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00063.11.ls 1/1 1 364 [. 1 791 [] 126.7 5.9e-35 PF00063.11.fs 1/1 3 364 .. 389 791 .] 595.5 4.6e-176 PF00612.17.fs 1/1 380 400 .. 1 21 [] 23.7 5.5e-06 PF00612.17.ls 1/1 380 400 .. 1 21 [] 25.7 0.00016 PF01576.9.fs 3/3 666 1523 .. 1 863 [] 611.9 5.2e-181 PF01576.9.ls 1/1 666 1523 .. 1 863 [] 613.8 1.4e-181 Alignments of top-scoring domains: PF00063.11.ls: domain 1 of 1, from 1 to 364: score 126.7, E = 5.9e-35 *->veDlveLtylnEpsvLhNLkkRYtsgdlIYTYsGlvLvsvNPYkrLp KIAA2034 - ----------------------------------------------- - iYteeiikaYrGkrrgElpPHiFAiAdeAYRsMlsdkeNQsIlisGESGA KIAA2034 - -------------------------------------------------- - GKTEntKkvmqYlAsvsgstpkvesaevtpnkeegsledqilqsNPiLEA KIAA2034 - -------------------------------------------------- - FGNAKTtRNNNSSRFGKfieIqFdatGsiNvTlvGgkIetYLLEKSRVvy KIAA2034 - -------------------------------------------------- - QtegERNFHIFYQLLagasaqeekkeLkLtspadpkdYaYLnqsgTynPc + Ln + KIAA2034 1 -----------------------R----------------LNR-A----- 5 ytvDdgiDDaeeFkdtrkAlkiiGftdeeqrsifrilAAILhLGNieGFk + KIAA2034 6 --L----------------------------------------------- 6 qdqatTGneeqAGvtvsedteeileiiaeLLGvDaeeLekaLlsrriktG d+ KIAA2034 7 -DR----------------------------------------------- 8 gggkRretvtkpqnveqAryaRDALAKaiYsRLFdWiVekiNkaLsakeQ +++ KIAA2034 9 ----------------------------------------------SPR- 11 asdSrGGqaaegdDTVSITVVdlPraaldktasfIGvLDIyGFEIFaekN + asf G+LDI+GFEIF + N KIAA2034 12 -----------------------------QGASFLGILDIAGFEIF-QLN 31 SFEQLcINYvNEKLQQfFNhhmFklEQEEYkrEgIeWtfIdyglDnqaci SFEQLcINY+NEKLQQ+FNh+mF+lEQEEY+rEgI+Wtf d+glD+q+ci KIAA2034 32 SFEQLCINYTNEKLQQLFNHTMFVLEQEEYQREGIPWTFLDFGLDLQPCI 81 dLIEkK.kPpGIlslLDEeCrfPkatDqtFldKLlqtfsskhprlthFAq dLIE + +PpG+l+lLDEeC+fPkatD++F++K+ q + hp +F q KIAA2034 82 DLIERPaNPPGLLALLDEECWFPKATDKSFVEKVAQEQ-GGHP---KF-Q 126 kpgrfkkgksrqgkteFiikHYAGdVeYnaegfleKNkDpLfddlisllk +p ++ ++++ F++ HYAG+V+Y a+ +l+KN+DpL+d++ +ll KIAA2034 127 RP------RHLRDQADFSVLHYAGKVDYKANEWLMKNMDPLNDNVAALLH 170 sSsdepllaeLFpeeel................................. +S+d +l ae++++e + ++ + ++ +++++++ ++ ++ ++++ ++ KIAA2034 171 QSTD-RLTAEIWKDEHGgfqqfsflgsfppsppgsaercssaisppgveg 219 .............seAaNltlkapdfeadfdeeeaaaksaklgsgkgksg + ++ ++ +++++ g++ KIAA2034 220 ivgleqvsslgdgPP-------------------------------GGRP 238 kkknfleTvgsqfkeslgeLmktLsstAnlnPHfvRCIKPNekKkagqFD + ++f +Tvg ++kesl Lm+tLs+t nP fvRCI PN++K+ag+++ KIAA2034 239 RRGMF-RTVGQLYKESLSRLMATLSNT---NPSFVRCIVPNHEKRAGKLE 284 aslVlhQlrclGvLEigiRirraGFPnRitfdeFlqRYrlLapktwpsgf ++lVl+Qlrc+GvLE giRi+r+GFPnRi+f+eF+qRY++L+p+++p+gf KIAA2034 285 PRLVLDQLRCNGVLE-GIRICRQGFPNRILFQEFRQRYEILTPNAIPKGF 333 rpewvgdakkgceliLqslrqtpgnlDkeeyrfGkTKiFfR<-* +d+k++ce+++q+l +lD+++yr+G++KiFfR KIAA2034 334 -----MDGKQACEKMIQAL-----ELDPNLYRVGQSKIFFR 364 PF00063.11.fs: domain 1 of 1, from 3 to 364: score 595.5, E = 4.6e-176 *->NkaLsakeQasdSrGGqaaegdDTVSITVVdlPraaldktasfIGvL N+aL+ + + asf G+L KIAA2034 3 NRALDRSP---R--------------------------QGASFLGIL 20 DIyGFEIFaekNSFEQLcINYvNEKLQQfFNhhmFklEQEEYkrEgIeWt DI+GFEIF + NSFEQLcINY+NEKLQQ+FNh+mF+lEQEEY+rEgI+Wt KIAA2034 21 DIAGFEIF-QLNSFEQLCINYTNEKLQQLFNHTMFVLEQEEYQREGIPWT 69 fIdyglDnqacidLIEkK.kPpGIlslLDEeCrfPkatDqtFldKLlqtf f d+glD+q+cidLIE + +PpG+l+lLDEeC+fPkatD++F++K+ q KIAA2034 70 FLDFGLDLQPCIDLIERPaNPPGLLALLDEECWFPKATDKSFVEKVAQEQ 119 sskhprlthFAqkpgrfkkgksrqgkteFiikHYAGdVeYnaegfleKNk + hp +F q+p ++ ++++ F++ HYAG+V+Y a+ +l+KN+ KIAA2034 120 -GGHP---KF-QRP------RHLRDQADFSVLHYAGKVDYKANEWLMKNM 158 DpLfddlisllksSsdepllaeLFpeeel..................... DpL+d++ +ll +S+d +l ae++++e + ++ + ++ +++++++ ++ KIAA2034 159 DPLNDNVAALLHQSTD-RLTAEIWKDEHGgfqqfsflgsfppsppgsaer 207 .........................seAaNltlkapdfeadfdeeeaaak ++ ++++ ++ + ++ ++ +++++ KIAA2034 208 cssaisppgvegivgleqvsslgdgPP----------------------- 234 saklgsgkgksgkkknfleTvgsqfkeslgeLmktLsstAnlnPHfvRCI g++ + ++f +Tvg ++kesl Lm+tLs+t nP fvRCI KIAA2034 235 --------GGRPRRGMF-RTVGQLYKESLSRLMATLSNT---NPSFVRCI 272 KPNekKkagqFDaslVlhQlrclGvLEigiRirraGFPnRitfdeFlqRY PN++K+ag+++++lVl+Qlrc+GvLE giRi+r+GFPnRi+f+eF+qRY KIAA2034 273 VPNHEKRAGKLEPRLVLDQLRCNGVLE-GIRICRQGFPNRILFQEFRQRY 321 rlLapktwpsgfrpewvgdakkgceliLqslrqtpgnlDkeeyrfGkTKi ++L+p+++p+gf +d+k++ce+++q+l +lD+++yr+G++Ki KIAA2034 322 EILTPNAIPKGF-----MDGKQACEKMIQAL-----ELDPNLYRVGQSKI 361 FfR<-* FfR KIAA2034 362 FFR 364 PF00612.17.fs: domain 1 of 1, from 380 to 400: score 23.7, E = 5.5e-06 *->rraaikIQaawRGylaRkryk<-* ++ ++ +Qaa RGylaR++++ KIAA2034 380 TDIIVSFQAAARGYLARRAFQ 400 PF00612.17.ls: domain 1 of 1, from 380 to 400: score 25.7, E = 0.00016 *->rraaikIQaawRGylaRkryk<-* ++ ++ +Qaa RGylaR++++ KIAA2034 380 TDIIVSFQAAARGYLARRAFQ 400 PF01576.9.fs: domain 3 of 3, from 666 to 1523: score 611.9, E = 5.2e-181 *->dlerqkreleeqlkrkeselsqlslklEdEqalvaqLqkkikeleaR + ++el +ql rke+el++ +++EdE ++aqL k+++e +a KIAA2034 666 EQQQRAEELRAQLGRKEEELQAALARAEDEGGARAQLLKSLREAQAA 712 IeELeEeLEaERaARaKaEkqRaDLsrELEeLsERLeEagGaTaaQiEln ++E++E+LE+ER AR+KaEkqR+DL +ELE+L +Le+ ++T aQ+El+ KIAA2034 713 LAEAQEDLESERVARTKAEKQRRDLGEELEALRGELEDTLDSTNAQQELR 762 kKREaELaKLRrdLEEanlqhEealatLRKKHqdainElsdQieqLqKqK +KRE+E + L++ LEE++ hE+a+ +LR +H +a+ El++Q+eq+++ K KIAA2034 763 SKREQEVTELKKTLEEETRIHEAAVQELRQRHGQALGELAEQLEQARRGK 812 akaEKeKsqlqaEvddlaaqldqiaKaKlnaEKkakqlEsqlsElqvKld + EK + l+aEv +l+a+l+++ a+++ E ++++lE ql+E+q ++ KIAA2034 813 GAWEKTRLALEAEVSELRAELSSLQTARQEGEQRRRRLELQLQEVQGRAG 862 ElqRqlnDltsqKsRLqsENsdLtrqleEaEaqvsqlsklKsqlesQLEe + +R++ + +++ +R q+E+++ +l EaE++ lsk s+ e+QL + KIAA2034 863 DGERARAEAAEKLQRAQAELENVSGALNEAESKTIRLSKELSSTEAQLHD 912 AkRslEEEsReRanLqaqlrnlehDlDslrEqlEEEsEAKaeleRqLsKa A+++l EE+R++++L + +r +e + + lrEqlEEE++A++ + R+L+ a KIAA2034 913 AQELLQEETRAKLALGSRVRAMEAEAAGLREQLEEEAAARERAGRELQTA 962 naeiqqwrsKfEsEgalraEElEElKkKlnqkisElEeaaEaanaKcssL +a++ +wr + E+E+ + E EE++++ + + ++l +++ + +++L KIAA2034 963 QAQLSEWRRRQEEEAGA-LEAGEEARRRAAREAEALTQRLAEKTETVDRL 1011 EKtKsRLqsElEDlqievEranaaaseLEKKqknFDKilaEwKkkvdelq E+ + RLq+El+D+++++E +++ +s LEKKq++FD++laE+K+ v + KIAA2034 1012 ERGRRRLQQELDDATMDLEQQRQLVSTLEKKQRKFDQLLAEEKAAVLRAV 1061 aEletAqreaRnlstElfrlKneleElkDqvEaLrRENKnLqdEikDLtd E+e A+ e R+ ++ +++l ++leE ++ E L+R N+ L E+ L + KIAA2034 1062 EERERAEAEGREREARALSLTRALEEEQEAREELERQNRALRAELEALLS 1111 qLgEgGRnvHELEKarRrLEaEkdELqaALeEAEaALeqeEsKvlRaqvE ++++ G++vHELE a R E + L a+ E+E+ L ++E+++lR++v KIAA2034 1112 SKDDVGKSVHELERACRVAEQAANDLRAQVTELEDELTAAEDAKLRLEVT 1161 lsqiRsEiERRLaEKEEEfEntRKnhqraiesLqasLaEaEaKgKaEalR +++++ + ER+L+ ++E E++R+++ +++++ +++ ++E+K+++ a++ KIAA2034 1162 VQALKTQHERDLQGRDEAGEERRRQLAKQLRDAEVER-DEERKQRTLAVA 1210 lKKKLEgdInELEiaLDhaNkanaeaqKnvKkyqqqvkeLQtqvEeeQRa KKLEg++ EL ++ a ++++ea K+++k q+q keL + vEe++ KIAA2034 1211 ARKKLEGELEELKAQMASAGQGKEEAVKQLRKMQAQMKELWREVEETRTS 1260 redareqlavaERRataLqaElEELrvaLeqaeRaRKqAEtElaEaserv re++ q +++E+R++ L+aE+ +L + L++++RaR+qA ++++E +++v KIAA2034 1261 REEIFSQNRESEKRLKGLEAEVLRLQEELAASDRARRQAQQDRDEMADEV 1310 neLtaqnssLiaqKRKLEgelaalqsDLDEavnElkaAeERakKAqaDaa ++ + + +++ ++KR+LEg+l++l+++L+E++++++ +R++K+ +++ KIAA2034 1311 ANGNLSKAAILEEKRQLEGRLGQLEEELEEEQSNSELLNDRYRKLLLQVE 1360 rLaeELrqEQehsqklErlRKqLEsqvKeLqvRLdEaEaaAlkgGKkvIq L++EL +E++ s k+E++R qLE+q+ eL RL E a A+++ K +I+ KIAA2034 1361 SLTTELSAERSFSAKAESGRQQLERQIQELRGRLGEEDAGARARHKMTIA 1410 KLEaRVReLEaELdgEqRRhaetqKnlRKaeRrvKELqfQvEEDkKnler LE++ + E++L+ E+R++ ++K R+ae+r+KE+ QvEE+++ ++ KIAA2034 1411 ALESKLAQAEEQLEQETRERILSGKLVRRAEKRLKEVVLQVEEERRVADQ 1460 lQDLvDKLqaKiKtyKRQlEEaEEiaqinlsKyRkaQreLEdAEERADqA l+D+++K + ++K++KRQlEEaEE+a + + R++QreLEd +E+A+ + KIAA2034 1461 LRDQLEKGNLRVKQLKRQLEEAEEEASRAQAGRRRLQRELEDVTESAESM 1510 EsslnklRqreaKsRr<-* +++++ lR Rr KIAA2034 1511 NREVTTLR---NRLRR 1523 PF01576.9.ls: domain 1 of 1, from 666 to 1523: score 613.8, E = 1.4e-181 *->dlerqkreleeqlkrkeselsqlslklEdEqalvaqLqkkikeleaR + ++el +ql rke+el++ +++EdE ++aqL k+++e +a KIAA2034 666 EQQQRAEELRAQLGRKEEELQAALARAEDEGGARAQLLKSLREAQAA 712 IeELeEeLEaERaARaKaEkqRaDLsrELEeLsERLeEagGaTaaQiEln ++E++E+LE+ER AR+KaEkqR+DL +ELE+L +Le+ ++T aQ+El+ KIAA2034 713 LAEAQEDLESERVARTKAEKQRRDLGEELEALRGELEDTLDSTNAQQELR 762 kKREaELaKLRrdLEEanlqhEealatLRKKHqdainElsdQieqLqKqK +KRE+E + L++ LEE++ hE+a+ +LR +H +a+ El++Q+eq+++ K KIAA2034 763 SKREQEVTELKKTLEEETRIHEAAVQELRQRHGQALGELAEQLEQARRGK 812 akaEKeKsqlqaEvddlaaqldqiaKaKlnaEKkakqlEsqlsElqvKld + EK + l+aEv +l+a+l+++ a+++ E ++++lE ql+E+q ++ KIAA2034 813 GAWEKTRLALEAEVSELRAELSSLQTARQEGEQRRRRLELQLQEVQGRAG 862 ElqRqlnDltsqKsRLqsENsdLtrqleEaEaqvsqlsklKsqlesQLEe + +R++ + +++ +R q+E+++ +l EaE++ lsk s+ e+QL + KIAA2034 863 DGERARAEAAEKLQRAQAELENVSGALNEAESKTIRLSKELSSTEAQLHD 912 AkRslEEEsReRanLqaqlrnlehDlDslrEqlEEEsEAKaeleRqLsKa A+++l EE+R++++L + +r +e + + lrEqlEEE++A++ + R+L+ a KIAA2034 913 AQELLQEETRAKLALGSRVRAMEAEAAGLREQLEEEAAARERAGRELQTA 962 naeiqqwrsKfEsEgalraEElEElKkKlnqkisElEeaaEaanaKcssL +a++ +wr + E+E+ + E EE++++ + + ++l +++ + +++L KIAA2034 963 QAQLSEWRRRQEEEAGA-LEAGEEARRRAAREAEALTQRLAEKTETVDRL 1011 EKtKsRLqsElEDlqievEranaaaseLEKKqknFDKilaEwKkkvdelq E+ + RLq+El+D+++++E +++ +s LEKKq++FD++laE+K+ v + KIAA2034 1012 ERGRRRLQQELDDATMDLEQQRQLVSTLEKKQRKFDQLLAEEKAAVLRAV 1061 aEletAqreaRnlstElfrlKneleElkDqvEaLrRENKnLqdEikDLtd E+e A+ e R+ ++ +++l ++leE ++ E L+R N+ L E+ L + KIAA2034 1062 EERERAEAEGREREARALSLTRALEEEQEAREELERQNRALRAELEALLS 1111 qLgEgGRnvHELEKarRrLEaEkdELqaALeEAEaALeqeEsKvlRaqvE ++++ G++vHELE a R E + L a+ E+E+ L ++E+++lR++v KIAA2034 1112 SKDDVGKSVHELERACRVAEQAANDLRAQVTELEDELTAAEDAKLRLEVT 1161 lsqiRsEiERRLaEKEEEfEntRKnhqraiesLqasLaEaEaKgKaEalR +++++ + ER+L+ ++E E++R+++ +++++ +++ ++E+K+++ a++ KIAA2034 1162 VQALKTQHERDLQGRDEAGEERRRQLAKQLRDAEVER-DEERKQRTLAVA 1210 lKKKLEgdInELEiaLDhaNkanaeaqKnvKkyqqqvkeLQtqvEeeQRa KKLEg++ EL ++ a ++++ea K+++k q+q keL + vEe++ KIAA2034 1211 ARKKLEGELEELKAQMASAGQGKEEAVKQLRKMQAQMKELWREVEETRTS 1260 redareqlavaERRataLqaElEELrvaLeqaeRaRKqAEtElaEaserv re++ q +++E+R++ L+aE+ +L + L++++RaR+qA ++++E +++v KIAA2034 1261 REEIFSQNRESEKRLKGLEAEVLRLQEELAASDRARRQAQQDRDEMADEV 1310 neLtaqnssLiaqKRKLEgelaalqsDLDEavnElkaAeERakKAqaDaa ++ + + +++ ++KR+LEg+l++l+++L+E++++++ +R++K+ +++ KIAA2034 1311 ANGNLSKAAILEEKRQLEGRLGQLEEELEEEQSNSELLNDRYRKLLLQVE 1360 rLaeELrqEQehsqklErlRKqLEsqvKeLqvRLdEaEaaAlkgGKkvIq L++EL +E++ s k+E++R qLE+q+ eL RL E a A+++ K +I+ KIAA2034 1361 SLTTELSAERSFSAKAESGRQQLERQIQELRGRLGEEDAGARARHKMTIA 1410 KLEaRVReLEaELdgEqRRhaetqKnlRKaeRrvKELqfQvEEDkKnler LE++ + E++L+ E+R++ ++K R+ae+r+KE+ QvEE+++ ++ KIAA2034 1411 ALESKLAQAEEQLEQETRERILSGKLVRRAEKRLKEVVLQVEEERRVADQ 1460 lQDLvDKLqaKiKtyKRQlEEaEEiaqinlsKyRkaQreLEdAEERADqA l+D+++K + ++K++KRQlEEaEE+a + + R++QreLEd +E+A+ + KIAA2034 1461 LRDQLEKGNLRVKQLKRQLEEAEEEASRAQAGRRRLQRELEDVTESAESM 1510 EsslnklRqreaKsRr<-* +++++ lR Rr KIAA2034 1511 NREVTTLR---NRLRR 1523 //