Gene/Protein Characteristic Table for KIAA1308
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Product ID ORK06582
Accession No AB037729
Description ral guanine nucleotide dissociation stimulator
Clone name fh08652
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (5796 bp)
Predicted protein sequence (745 aa)
Source Human fetal brain
Rouge ID mKIAA1308 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence
Description

Length: 5796 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq Warning No warning
Integrity of 3' end
Length of 3'UTR 3558 bp
Genome contig ID gi89161216r_134862929
PolyA signal sequence
(ATTAAA,-22)
+----*----+----*----+----*----+----
ACTTGAATATTATATTAAAATCCTGTTTCTACTAT
Flanking genome sequence
(100000 - 99951)
----+----*----+----*----+----*----+----*----+----*
ACCCTGGTCATTACAGTTTTGTTCTTTCATTACCTGTCTTAATTAAAATG

Ensembl ContigView (Add our DAS server as a DAS source)


Chr f/r start end exon identity class
Ensembl gnome browser 9 r 134962929 134974046 12 99.2 Perfect prediction
Features of the protein sequence
Description

Length: 745 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
EAW88039 0 100.0 ral guanine nuc...
Homo sapiens
EAW88041 0 100.0 ral guanine nuc...
Homo sapiens
BAB84940 1.5e-156 98.2 FLJ00185 protei...
Homo sapiens
EAW88037 1.5e-156 98.2 ral guanine nuc...
Homo sapiens
AAQ13414 1.5e-156 98.2 Ral guanine nuc...
Homo sapiens
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
Entry Exp ID% HUGE_ID
AB023176 3.8e-27 53.6 KIAA0959
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR001895 179 393 PF00617 Guanine-nucleotide dissociation stimulator CDC25
HMMSmart IPR001895 178 445 SM00147 Guanine-nucleotide dissociation stimulator CDC25
ProfileScan IPR001895 182 444 PS50009 Guanine-nucleotide dissociation stimulator CDC25
ScanRegExp IPR001895 360 390 PS00720 Guanine-nucleotide dissociation stimulator CDC25
Expression profile
Description

RT-PCR-ELISA
Experimental conditions
Primer_f CTACAAAGAATGGTGACAGCT
Primer_r GCACTGGTTCTTGACACTTTC
PCR conditions 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RH mapping information
Description

Chromosome No. 9
Experimental conditions
Panel name unigene
Primer_f -
Primer_r -
PCR product length -
PCR conditions -
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