hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-23125122/chunk_1/iprscan-20080501-23125122.nocrc
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Query sequence: KIAA1308
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00147                                                 396.0   2.1e-114   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00147    1/1     178   445 ..     1   261 []   396.0 2.1e-114

Alignments of top-scoring domains:
SM00147: domain 1 of 1, from 178 to 445: score 396.0, E = 2.1e-114
                   *->lllldpeelAeQLTlldfelFrkIepsEllgsvwgkrskkspsplap
                      ll ++p+ +AeQ Tl+d+elF+k++p ++lgs+w++r+kk++++lap
    KIAA1308   178    LLVFPPDLVAEQFTLMDAELFKKVVPYHCLGSIWSQRDKKGKEHLAP 224  

                   qnleafierfNevsnwVateIlkqttlkpkkRaevlskFIkVAkhcreLn
                    +++a++++fN+v+n+V+t++l+  ++k+ +Ra+v++++I+VA++cr L+
    KIAA1308   225 -TIRATVTQFNSVANCVITTCLGNRSTKAPDRARVVEHWIEVARECRILK 273  

                   NFnSlmAIvsaLssspIsRLkkTWeklsskykklfeeLeelldpserNfk
                   NF+Sl+AI+saL+s++I+RLkkTWe +s+++ ++f++L+e+++++ +N++
    KIAA1308   274 NFSSLYAILSALQSNSIHRLKKTWEDVSRDSFRIFQKLSEIFSDE-NNYS 322  

                   nYReaLkscnksp..................nvqppcvPflGvyLkDLtf
                    +Re+L ++++s+  + + ++++ ++++++++  +++vP+lG++L+DL++
    KIAA1308   323 LSRELLIKEGTSKfatlemnpkraqkrpketGIIQGTVPYLGTFLTDLVM 372  

                   idegnpdflengtkglvNFeKrrkiakilreirqlqsacqpynlkpnrnd
                   +d++++d+l+    +l+NFeKrrk+++++++i++lqsac++y ++p+ ++
    KIAA1308   373 LDTAMKDYLYG---RLINFEKRRKEFEVIAQIKLLQSACNNYSIAPD-EQ 418  

                   iqellrasrplevlpeeedelyelSlriEPrv<-*
                   ++ ++ra   +e+l+e+  e+y+lS+++EP++   
    KIAA1308   419 FGAWFRA---VERLSET--ESYNLSCELEPPS    445  

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