Gene/Protein Characteristic Table for KIAA1098
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Product ID ORK01625
Accession No AB029021
Description tripartite motif containing 35, transcript variant 1
Clone name hk07318
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (4181 bp)
Predicted protein sequence (504 aa)
Flexi ORF Clone FXC01625
Source Human adult brain
Rouge ID mKIAA1098 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence
Description

Length: 4181 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq Warning No warning
Features of the protein sequence
Description

Length: 504 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
Q9UPQ4 1.3e-207 100.0 Tripartite moti...
Homo sapiens
XP_001108814 1.5e-207 99.8 similar to trip...
Macaca mulatta
Q5RBG2 2.6e-206 99.6 Tripartite moti...
Pongo abelii
XP_543229 3.9e-193 90.5 similar to trip...
Canis lupus fam...
XP_001928415 2.2e-187 89.2 similar to Trip...
Sus scrofa
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
Entry Exp ID% HUGE_ID
AB020705 1.4e-05 24.0 KIAA0898
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
FPrintScan IPR000315 120 137 PR01406 Zinc finger
IPR000315 139 153 PR01406 Zinc finger
IPR003879 311 328 PR01407 Butyrophylin-like
IPR003879 349 373 PR01407 Butyrophylin-like
IPR003879 430 454 PR01407 Butyrophylin-like
HMMPfam IPR001841 32 71 PF00097 Zinc finger
IPR000315 107 148 PF00643 Zinc finger
IPR003877 364 495 PF00622 SPla/RYanodine receptor SPRY
HMMSmart IPR001841 32 71 SM00184 Zinc finger
IPR000315 107 148 SM00336 Zinc finger
IPR006574 312 363 SM00589 SPRY-associated
IPR003877 364 495 SM00449 SPla/RYanodine receptor SPRY
ProfileScan IPR001841 32 72 PS50089 Zinc finger
IPR000315 107 148 PS50119 Zinc finger
IPR001870 295 498 PS50188 B302
ScanRegExp IPR001841 47 56 PS00518 Zinc finger
Expression profile
Description

RT-PCR-ELISA
Experimental conditions
Primer_f TTGGGCGTGGTGAGGATGTTG
Primer_r CTTTACAGGAGAGGGTCACAC
PCR conditions 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RH mapping information
Description

Chromosome No. 8
Experimental conditions
Panel name UniGene
Primer_f -
Primer_r -
PCR product length -
PCR conditions -
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