SLC24A5 ORF clone pFN21AE6463

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE6463

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Clone info.

Species

human

Clone Name

pFN21AE6463 Sequence (with vector) Restriction Map

Product ID

FHC16609

ORF Sequence

DNA sequence (1500 bp)
Protein sequence (500 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE6463

Symbol

SLC24A5

Alias : JSX, NCKX5, OCA6, SHEP4

Description

solute carrier family 24 (sodium/potassium/calcium exchanger), member 5

Original Clone ID

oc96463

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1500 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 500 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS10128.1 0 100.0 SLC24A5 CCDS13140.1 5e-38 36.7 SLC24A3 CCDS45156.1 5.1e-37 36.5 SLC24A4 CCDS9903.2 5.6e-37 36.5 SLC24A4 CCDS45155.2 1.7e-36 37.4 SLC24A4 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR004837 84 213 PF01699 Sodium/calcium exchanger membrane region IPR004837 343 480 PF01699 Sodium/calcium exchanger membrane region HMMTigr IPR004481 71 476 TIGR00367 K+-dependent Na+/Ca+ exchanger-like
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 12 RALLLGILWATAHLPLSGTSLPQ 34 SECONDARY 23 2 75 IIVYMFMAISIVCDEYFLPSLEI 97 PRIMARY 23 3 122 ELVTAFLGVFITKGDIGISTILG 144 SECONDARY 23 4 149 NLLGICAACGLLSNTVSTLSCWP 171 SECONDARY 23 5 173 FRDCAAYTISAAAVLGIIYDNQ 194 SECONDARY 22 6 198 YEGALLLLIYGLYVLVLCFDIKI 220 PRIMARY 23 7 306 IFWVLSLPIITLLFLTTPDC 325 SECONDARY 20 8 335 VITFFMSAIWISAFTYILVWMVT 357 PRIMARY 23 9 410 DMLCLGIPWFIKTAFINGSAPAE 432 SECONDARY 23 10 438 LTYITISLNISIIFLFLAVHFNG 460 PRIMARY 23 11 471 CLLSYLGLATLSVLYELGIIGNN 493 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_995322 500 113750,609802 100.0 100.0 NP_705934 558 210750,609840,615887 36.5 80.8 NP_705932 622 210750,609840,615887 36.5 80.8 XP_011534740 645 210750,609840,615887 36.5 80.8 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE6463 Download

>KIEE6463  1500 bp
ATGCAGACAAAAGGGGGCCAAACATGGGCGAGAAGGGCTCTGTTGCTCGGCATCCTGTGG
GCCACTGCACATCTGCCTCTCTCAGGGACCTCCCTGCCCCAACGTCTCCCAAGGGCCACA
GGAAATAGCACCCAATGTGTTATTTCTCCATCATCGGAGTTTCCCGAAGGGTTTTTCACG
AGACAGGAGCGCAGAGATGGAGGCATCATAATCTATTTCCTAATTATCGTTTACATGTTC
ATGGCCATATCTATTGTCTGTGATGAATACTTCCTACCCTCCCTGGAAATCATCAGTGAA
TCCCTCGGATTGTCTCAGGATGTTGCAGGCACAACTTTCATGGCAGCGGGCAGTTCAGCT
CCTGAATTAGTTACTGCTTTCCTAGGTGTATTTATCACAAAGGGAGATATTGGCATTAGC
ACCATCCTTGGATCTGCAATTTATAATCTCCTTGGCATCTGTGCTGCCTGTGGTTTGCTA
TCTAATACGGTCTCAACACTATCATGTTGGCCCCTATTCAGAGACTGTGCAGCGTACACA
ATTAGTGCAGCAGCAGTTCTTGGTATAATATATGACAACCAAGTTTACTGGTATGAAGGG
GCTTTACTGCTTTTGATATATGGATTGTATGTTTTGGTGCTGTGTTTTGACATTAAAATT
AACCAATATATTATAAAGAAATGCAGTCCTTGCTGCGCCTGTCTTGCCAAAGCTATGGAG
AGAAGTGAACAACAGCCACTGATGGGCTGGGAAGATGAAGGTCAACCATTCATTCGTCGG
CAATCAAGAACTGATAGTGGAATATTTTATGAAGATTCTGGCTACTCTCAGCTCTCTATA
AGTTTACATGGCCTTAGTCAGGTTTCTGAAGATCCACCAAGTGTTTTCAACATGCCTGAA
GCAGACTTAAAAAGAATTTTTTGGGTATTATCCCTTCCTATTATTACATTACTTTTTCTA
ACCACACCAGATTGTAGAAAAAAGTTTTGGAAAAACTACTTTGTGATAACCTTTTTCATG
TCTGCAATATGGATATCCGCATTTACATATATCCTGGTTTGGATGGTCACAATAACTGGG
GAAACACTAGAAATTCCCGATACAGTAATGGGCCTTACTTTATTAGCAGCAGGAACAAGC
ATACCAGACACAATTGCAAGTGTGTTGGTTGCAAGAAAAGGGAAAGGAGATATGGCTATG
TCTAACATCGTGGGATCCAATGTGTTTGATATGTTGTGCCTTGGTATTCCATGGTTTATT
AAAACTGCATTTATAAATGGATCAGCTCCTGCAGAAGTAAACAGCAGAGGACTAACTTAC
ATAACCATCTCTCTCAACATTTCAATTATTTTTCTTTTTTTAGCAGTTCACTTCAATGGC
TGGAAACTAGACAGAAAGTTGGGAATAGTCTGCCTATTATCATACTTGGGGCTTGCTACA
TTATCAGTTCTATATGAACTTGGAATTATTGGAAATAATAAAATAAGGGGCTGTGGAGGT

ORF Protein

Cloned ORF protein sequence for pFN21AE6463 Download

>KIEE6463  500 aa
MQTKGGQTWARRALLLGILWATAHLPLSGTSLPQRLPRATGNSTQCVISPSSEFPEGFFT
RQERRDGGIIIYFLIIVYMFMAISIVCDEYFLPSLEIISESLGLSQDVAGTTFMAAGSSA
PELVTAFLGVFITKGDIGISTILGSAIYNLLGICAACGLLSNTVSTLSCWPLFRDCAAYT
ISAAAVLGIIYDNQVYWYEGALLLLIYGLYVLVLCFDIKINQYIIKKCSPCCACLAKAME
RSEQQPLMGWEDEGQPFIRRQSRTDSGIFYEDSGYSQLSISLHGLSQVSEDPPSVFNMPE
ADLKRIFWVLSLPIITLLFLTTPDCRKKFWKNYFVITFFMSAIWISAFTYILVWMVTITG
ETLEIPDTVMGLTLLAAGTSIPDTIASVLVARKGKGDMAMSNIVGSNVFDMLCLGIPWFI
KTAFINGSAPAEVNSRGLTYITISLNISIIFLFLAVHFNGWKLDRKLGIVCLLSYLGLAT
LSVLYELGIIGNNKIRGCGG

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE6463 Download

>pFN21AE6463  6205 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGCAGACAAAAGGGGGCCAAACATGGGCGAGAAG
GGCTCTGTTGCTCGGCATCCTGTGGGCCACTGCACATCTGCCTCTCTCAGGGACCTCCCT
GCCCCAACGTCTCCCAAGGGCCACAGGAAATAGCACCCAATGTGTTATTTCTCCATCATC
GGAGTTTCCCGAAGGGTTTTTCACGAGACAGGAGCGCAGAGATGGAGGCATCATAATCTA
TTTCCTAATTATCGTTTACATGTTCATGGCCATATCTATTGTCTGTGATGAATACTTCCT
ACCCTCCCTGGAAATCATCAGTGAATCCCTCGGATTGTCTCAGGATGTTGCAGGCACAAC
TTTCATGGCAGCGGGCAGTTCAGCTCCTGAATTAGTTACTGCTTTCCTAGGTGTATTTAT
CACAAAGGGAGATATTGGCATTAGCACCATCCTTGGATCTGCAATTTATAATCTCCTTGG
CATCTGTGCTGCCTGTGGTTTGCTATCTAATACGGTCTCAACACTATCATGTTGGCCCCT
ATTCAGAGACTGTGCAGCGTACACAATTAGTGCAGCAGCAGTTCTTGGTATAATATATGA
CAACCAAGTTTACTGGTATGAAGGGGCTTTACTGCTTTTGATATATGGATTGTATGTTTT
GGTGCTGTGTTTTGACATTAAAATTAACCAATATATTATAAAGAAATGCAGTCCTTGCTG
CGCCTGTCTTGCCAAAGCTATGGAGAGAAGTGAACAACAGCCACTGATGGGCTGGGAAGA
TGAAGGTCAACCATTCATTCGTCGGCAATCAAGAACTGATAGTGGAATATTTTATGAAGA
TTCTGGCTACTCTCAGCTCTCTATAAGTTTACATGGCCTTAGTCAGGTTTCTGAAGATCC
ACCAAGTGTTTTCAACATGCCTGAAGCAGACTTAAAAAGAATTTTTTGGGTATTATCCCT
TCCTATTATTACATTACTTTTTCTAACCACACCAGATTGTAGAAAAAAGTTTTGGAAAAA
CTACTTTGTGATAACCTTTTTCATGTCTGCAATATGGATATCCGCATTTACATATATCCT
GGTTTGGATGGTCACAATAACTGGGGAAACACTAGAAATTCCCGATACAGTAATGGGCCT
TACTTTATTAGCAGCAGGAACAAGCATACCAGACACAATTGCAAGTGTGTTGGTTGCAAG
AAAAGGGAAAGGAGATATGGCTATGTCTAACATCGTGGGATCCAATGTGTTTGATATGTT
GTGCCTTGGTATTCCATGGTTTATTAAAACTGCATTTATAAATGGATCAGCTCCTGCAGA
AGTAAACAGCAGAGGACTAACTTACATAACCATCTCTCTCAACATTTCAATTATTTTTCT
TTTTTTAGCAGTTCACTTCAATGGCTGGAAACTAGACAGAAAGTTGGGAATAGTCTGCCT
ATTATCATACTTGGGGCTTGCTACATTATCAGTTCTATATGAACTTGGAATTATTGGAAA
TAATAAAATAAGGGGCTGTGGAGGTGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCC
TCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAG
CTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTT
CGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGA
AAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGC
TGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAG
ATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAA
TGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATC
CGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGT
GGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCA
AATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGG
AAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGC
CTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTG
GGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTT
CGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTA
TTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAAT
GACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGA
GAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACA
ACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACT
CGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACC
ACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACT
CTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTT
CTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGT
GGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTT
ATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATA
GGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGG
TATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAA
AGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGG
CGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGA
GGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCG
TGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGG
GAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTC
GCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCG
GTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCA
CTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGT
GGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAG
TTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCG
GTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATC
CTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTT
TGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAG
GAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAG
TGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTA
AAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTC
TGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAA
ATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATG
CGTCCGGCGTAGAGGATCGAGATCT