SLC46A2 ORF clone pFN21AE6461

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE6461

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Clone info.

Species

human

Clone Name

pFN21AE6461 Sequence (with vector) Restriction Map

Product ID

FHC23607

ORF Sequence

DNA sequence (1425 bp)
Protein sequence (475 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE6461

Symbol

SLC46A2

Alias : Ly110, TSCOT

Description

solute carrier family 46, member 2

Original Clone ID

oc96461

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1425 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 475 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS6786.1 2.5e-201 99.8 SLC46A2 CCDS9332.1 1.5e-20 30.3 SLC46A3 CCDS45021.1 1.5e-20 30.3 SLC46A3 CCDS74020.1 9e-13 24.6 SLC46A1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR001958 177 198 PR01035 Tetracycline resistance protein IPR001958 347 368 PR01035 Tetracycline resistance protein IPR001958 407 430 PR01035 Tetracycline resistance protein HMMPfam IPR011701 85 420 PF07690 Major facilitator superfamily
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 24 PVMASSQVAASLYDAGLLLVVKA 46 SECONDARY 23 2 76 NFYIIYNLVVGLSPLLSAYGLGW 98 SECONDARY 23 3 107 ISICMSLLGFLLSRLGLLLKVLL 129 PRIMARY 23 4 138 GAAALNGLFGGFSAFWSGVMALG 160 SECONDARY 23 5 170 SVRLILIDLMLGLAGFCGSMASG 192 SECONDARY 23 6 206 LILTACSVSCASFALLYSLLVLK 228 SECONDARY 23 7 286 LFVGAIIYDLAVVGTVDVIPLFV 308 PRIMARY 23 8 320 VGYGMAAGYTIFITSFLGVLVFS 342 PRIMARY 23 9 348 TTMIMIGMVSFGSGALLLAFVKE 370 PRIMARY 23 10 372 YMFYIARAVMLFALIPVTTIRSA 394 PRIMARY 23 11 404 YGKVFVILQLSLALTGVVTSTLY 426 PRIMARY 23 12 437 FVGSCFALSSFLSFLAIIPISIV 459 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_149040 475 608956 99.8 100.0 NP_861450 461 616764 30.3 84.0 XP_005266418 463 616764 30.3 84.0 NP_001129391 463 616764 30.3 84.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE6461 Download

>KIEE6461  1425 bp
ATGAGCCCCGAGGTCACCTGCCCGCGGAGGGGCCACCTGCCTCGCTTCCACCCGAGGACC
TGGGTTGAGCCCGTGATGGCCTCGTCCCAGGTGGCTGCCTCCCTCTACGATGCGGGGCTA
CTCCTCGTGGTGAAGGCGTCCTACGGAACCGGAGGCTCCTCCAACCACAGTGCCAGCCCA
TCGCCCCGGGGGGCTCTAGAGGACCAACAGCAGAGAGCCATCTCCAATTTCTACATTATC
TACAACCTTGTGGTGGGCCTGTCCCCCCTGCTGTCCGCCTACGGGCTGGGATGGCTCAGC
GACCGCTACCACCGAAAGATCTCCATCTGCATGTCGCTGCTGGGCTTCCTGCTCTCCCGC
CTCGGGCTGCTGCTCAAGGTGCTGCTGGACTGGCCAGTGGAGGTGCTGTACGGGGCGGCG
GCGCTGAACGGGCTATTCGGCGGCTTCTCCGCCTTCTGGTCCGGGGTCATGGCGCTGGGA
TCGCTGGGCTCCTCCGAGGGCCGCCGCTCTGTGCGCCTCATCCTCATTGACCTGATGCTG
GGCTTGGCGGGGTTCTGCGGGAGCATGGCTTCCGGGCATCTCTTCAAGCAGATGGCTGGG
CACTCTGGGCAGGGCCTGATACTGACGGCCTGCAGCGTGAGCTGTGCCTCGTTTGCCCTG
CTCTACAGCCTTTTGGTGCTAAAGGTCCCTGAGTCGGTGGCCAAACCCAGCCAGGAGCTC
CCCGCCGTGGATACCGTGTCTGGCACGGTTGGCACATACCGCACTCTGGATCCTGATCAG
TTGGACCAACAGTATGCAGTGGGGCACCCTCCATCTCCTGGAAAAGCAAAACCCCATAAA
ACCACCATTGCCTTGCTCTTTGTGGGTGCTATCATATATGACCTGGCGGTGGTGGGCACA
GTGGACGTGATCCCTCTTTTTGTGCTGAGGGAGCCTCTCGGTTGGAACCAAGTGCAGGTG
GGCTATGGTATGGCTGCAGGGTACACCATCTTCATCACCAGCTTCCTGGGTGTCCTGGTC
TTCTCCCGCTGCTTTCGGGACACCACCATGATCATGATTGGGATGGTCTCCTTTGGGTCA
GGAGCCCTCCTCTTGGCTTTTGTGAAAGAGACATACATGTTCTATATTGCTCGAGCCGTC
ATGCTGTTTGCTCTCATCCCCGTCACAACCATCCGATCAGCTATGTCCAAACTCATAAAG
GGCTCCTCTTATGGAAAGGTGTTCGTCATACTGCAGCTGTCCTTGGCTCTGACCGGCGTG
GTGACATCCACCTTGTACAACAAGATCTACCAGCTCACCATGGACATGTTTGTGGGCTCC
TGCTTTGCTCTCTCCTCCTTTCTCTCCTTCCTGGCCATCATTCCAATTAGCATCGTGGCC
TATAAACAAGTCCCATTGTCACCATATGGAGACATCATAGAGAAA

ORF Protein

Cloned ORF protein sequence for pFN21AE6461 Download

>KIEE6461  475 aa
MSPEVTCPRRGHLPRFHPRTWVEPVMASSQVAASLYDAGLLLVVKASYGTGGSSNHSASP
SPRGALEDQQQRAISNFYIIYNLVVGLSPLLSAYGLGWLSDRYHRKISICMSLLGFLLSR
LGLLLKVLLDWPVEVLYGAAALNGLFGGFSAFWSGVMALGSLGSSEGRRSVRLILIDLML
GLAGFCGSMASGHLFKQMAGHSGQGLILTACSVSCASFALLYSLLVLKVPESVAKPSQEL
PAVDTVSGTVGTYRTLDPDQLDQQYAVGHPPSPGKAKPHKTTIALLFVGAIIYDLAVVGT
VDVIPLFVLREPLGWNQVQVGYGMAAGYTIFITSFLGVLVFSRCFRDTTMIMIGMVSFGS
GALLLAFVKETYMFYIARAVMLFALIPVTTIRSAMSKLIKGSSYGKVFVILQLSLALTGV
VTSTLYNKIYQLTMDMFVGSCFALSSFLSFLAIIPISIVAYKQVPLSPYGDIIEK

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE6461 Download

>pFN21AE6461  6130 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGAGCCCCGAGGTCACCTGCCCGCGGAGGGGCCA
CCTGCCTCGCTTCCACCCGAGGACCTGGGTTGAGCCCGTGATGGCCTCGTCCCAGGTGGC
TGCCTCCCTCTACGATGCGGGGCTACTCCTCGTGGTGAAGGCGTCCTACGGAACCGGAGG
CTCCTCCAACCACAGTGCCAGCCCATCGCCCCGGGGGGCTCTAGAGGACCAACAGCAGAG
AGCCATCTCCAATTTCTACATTATCTACAACCTTGTGGTGGGCCTGTCCCCCCTGCTGTC
CGCCTACGGGCTGGGATGGCTCAGCGACCGCTACCACCGAAAGATCTCCATCTGCATGTC
GCTGCTGGGCTTCCTGCTCTCCCGCCTCGGGCTGCTGCTCAAGGTGCTGCTGGACTGGCC
AGTGGAGGTGCTGTACGGGGCGGCGGCGCTGAACGGGCTATTCGGCGGCTTCTCCGCCTT
CTGGTCCGGGGTCATGGCGCTGGGATCGCTGGGCTCCTCCGAGGGCCGCCGCTCTGTGCG
CCTCATCCTCATTGACCTGATGCTGGGCTTGGCGGGGTTCTGCGGGAGCATGGCTTCCGG
GCATCTCTTCAAGCAGATGGCTGGGCACTCTGGGCAGGGCCTGATACTGACGGCCTGCAG
CGTGAGCTGTGCCTCGTTTGCCCTGCTCTACAGCCTTTTGGTGCTAAAGGTCCCTGAGTC
GGTGGCCAAACCCAGCCAGGAGCTCCCCGCCGTGGATACCGTGTCTGGCACGGTTGGCAC
ATACCGCACTCTGGATCCTGATCAGTTGGACCAACAGTATGCAGTGGGGCACCCTCCATC
TCCTGGAAAAGCAAAACCCCATAAAACCACCATTGCCTTGCTCTTTGTGGGTGCTATCAT
ATATGACCTGGCGGTGGTGGGCACAGTGGACGTGATCCCTCTTTTTGTGCTGAGGGAGCC
TCTCGGTTGGAACCAAGTGCAGGTGGGCTATGGTATGGCTGCAGGGTACACCATCTTCAT
CACCAGCTTCCTGGGTGTCCTGGTCTTCTCCCGCTGCTTTCGGGACACCACCATGATCAT
GATTGGGATGGTCTCCTTTGGGTCAGGAGCCCTCCTCTTGGCTTTTGTGAAAGAGACATA
CATGTTCTATATTGCTCGAGCCGTCATGCTGTTTGCTCTCATCCCCGTCACAACCATCCG
ATCAGCTATGTCCAAACTCATAAAGGGCTCCTCTTATGGAAAGGTGTTCGTCATACTGCA
GCTGTCCTTGGCTCTGACCGGCGTGGTGACATCCACCTTGTACAACAAGATCTACCAGCT
CACCATGGACATGTTTGTGGGCTCCTGCTTTGCTCTCTCCTCCTTTCTCTCCTTCCTGGC
CATCATTCCAATTAGCATCGTGGCCTATAAACAAGTCCCATTGTCACCATATGGAGACAT
CATAGAGAAAGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTG
CAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTG
CCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATA
AGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATT
TGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTT
AACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTT
TTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCG
CTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGT
TTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGA
AATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTC
ATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATT
CAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCT
CACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGT
TACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGT
TTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGAC
GCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTAC
TCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCT
GCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCG
AAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGG
GAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCA
ATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAA
CAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTT
CCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATC
ATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGG
AGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATT
AAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAA
AGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAA
AAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGC
TCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGA
CAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTC
CGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTT
CTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCT
GTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTG
AGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTA
GCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCT
ACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAA
GAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTT
GCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTA
CGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTAT
CAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGAT
GGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGG
TAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGC
GATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGC
GCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCT
GCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGG
ATCGAGATCT