SLC52A3 ORF clone pFN21AE6460

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Halotag ORF Clone pFN21AE6460

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Clone info.

Species

human

Clone Name

pFN21AE6460 Sequence (with vector) Restriction Map

Product ID

FHC26864

ORF Sequence

DNA sequence (1407 bp)
Protein sequence (469 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE6460

Symbol

SLC52A3

Alias : BVVLS, BVVLS1, C20orf54, RFT2, RFVT3, bA371L19.1, hRFT2

Description

solute carrier family 52 (riboflavin transporter), member 3

Original Clone ID

oc96460

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1407 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 469 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS13007.1 6.6e-203 99.4 SLC52A3 CCDS6423.1 5.2e-30 43.2 SLC52A2 CCDS11066.1 4.5e-29 41.9 SLC52A1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR009357 296 395 PF06237 Endogenous retrovirus receptor
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 8 LVCVFGMGSWVTINGLWVELPLL 30 PRIMARY 23 2 41 PSYLTVVIQLANIGPLLVTLLHH 63 SECONDARY 23 3 70 SEVPIIFTLLGVGTVTCIIFAFL 92 PRIMARY 23 4 106 IAFLVLTFFLALVDCTSSVTFLP 128 PRIMARY 23 5 142 FVGEGLSGLLPALVALAQGSGLT 164 SECONDARY 23 6 218 FSPLVFFLLLSIMMACCLVAFFV 240 PRIMARY 23 7 293 APCCPAHLAFVYTLVAFVNALTN 315 PRIMARY 23 8 334 YHLAATLSIVANPLASLVSMFLP 356 SECONDARY 23 9 363 LGVLSVLGTCFGGYNMAMAVMSP 385 SECONDARY 23 10 398 LIVASWVLFSGCLSYVKVMLGVV 420 PRIMARY 23 11 432 CGAAVQLGSLLGALLMFPLVNVL 454 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_011527450 469 211500,211530,613350 99.4 100.0 NP_212134 469 211500,211530,613350 99.4 100.0 XP_005260712 469 211500,211530,613350 99.4 100.0 XP_011515602 357 607882,614707 41.0 82.5 XP_016869309 445 607882,614707 43.2 98.9 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE6460 Download

>KIEE6460  1407 bp
ATGGCCTTCCTGATGCACCTGCTGGTCTGCGTCTTCGGAATGGGCTCCTGGGTGACCATC
AATGGGCTCTGGGTAGAGCTGCCCCTGCTGGTGATGGAGCTGCCCGAGGGCTGGTACCTG
CCCTCCTACCTCACGGTGGTCATCCAGCTGGCCAACATCGGGCCCCTCCTGGTCACCCTG
CTCCATCACTTCCGGCCCAGCTGCCTTTCCGAAGTGCCCATCATCTTCACCCTGCTGGGC
GTGGGAACCGTCACCTGCATCATCTTTGCCTTCCTCTGGAATATGACCTCCTGGGTGCTG
GACGGCCACCACAGCATCGCTTTCTTGGTCCTCACCTTCTTCCTGGCCCTGGTGGACTGC
ACCTCTTCAGTGACCTTCCTGCCGTTCATGAGCCGGCTGCCCACCTACTACCTCACCACC
TTCTTTGTGGGTGAAGGACTCAGCGGCCTCTTGCCCGCCCTGGTGGCTCTTGCCCAGGGC
TCCGGTCTCACTACCTGCGTCAATGTCACTGAGATATCAGACAGCGTACCAAGCCCTGTA
CCCACGAGGGAGACTGACATCGCACAGGGAGTTCCCAGAGCTTTGGTGTCCGCCCTCCCC
GGAATGGAAGCACCCTTGTCCCACCTGGAGAGCCGCTACCTTCCCGCCCACTTCTCACCC
CTGGTCTTCTTCCTCCTCCTATCCATCATGATGGCCTGCTGCCTCGTGGCGTTCTTTGTC
CTCCAGCGTCAACCCAGGTGCTGGGAGGCTTCCGTGGAAGACCTCCTCAATGACCAGGTC
ACCCTCCACTCCATCCGGCTGCGGGAAGAGAATGACTTGGGCCCTGCAGGCATGGTGGAC
AGCAGCCAGGGCCAGGGGTATCTAGAGGAGAAAGCAGCCCCCTGCTGCCCGGCGCACCTG
GCCTTCGTCTATACCCTGGTGGCCTTCGTCAACGCGCTCACCAACGGCATGCTGCCCTCT
GTGCAGACCTACTCCTGCCTGTCCTATGGGCCAGTTGCCTACCACCTGGCTGCCACCCTC
AGCATTGTGGCCAACCCTCTTGCCTCGTTGGTCTCCATGTTCCTGCCTAACAGGTCTCTG
CTGTTCCTGGGGGTCCTCTCCGTGCTTGGGACCTGCTTTGGGGGCTACAACATGGCCATG
GCGGTGATGAGCCCCTGCCCCCTCTTGCAGGGCCACTGGGGTGGGGAAGTCCTCATTGTG
GCCTCGTGGGTGCTTTTCAGCGGCTGCCTCAGCTACGTCAAGGTGATGCTGGGCGTGGTC
CTGCGCGACCTCAGCCGCAGCGCCCTCTTGTGGTGCGGGGCGGCGGTGCAGCTGGGCTCG
CTGCTCGGAGCGCTGCTCATGTTCCCTCTGGTCAACGTGCTGCGGCTCTTCTCGTCCGCG
GACTTCTGCAATCTGCACTGTCCAGCC

ORF Protein

Cloned ORF protein sequence for pFN21AE6460 Download

>KIEE6460  469 aa
MAFLMHLLVCVFGMGSWVTINGLWVELPLLVMELPEGWYLPSYLTVVIQLANIGPLLVTL
LHHFRPSCLSEVPIIFTLLGVGTVTCIIFAFLWNMTSWVLDGHHSIAFLVLTFFLALVDC
TSSVTFLPFMSRLPTYYLTTFFVGEGLSGLLPALVALAQGSGLTTCVNVTEISDSVPSPV
PTRETDIAQGVPRALVSALPGMEAPLSHLESRYLPAHFSPLVFFLLLSIMMACCLVAFFV
LQRQPRCWEASVEDLLNDQVTLHSIRLREENDLGPAGMVDSSQGQGYLEEKAAPCCPAHL
AFVYTLVAFVNALTNGMLPSVQTYSCLSYGPVAYHLAATLSIVANPLASLVSMFLPNRSL
LFLGVLSVLGTCFGGYNMAMAVMSPCPLLQGHWGGEVLIVASWVLFSGCLSYVKVMLGVV
LRDLSRSALLWCGAAVQLGSLLGALLMFPLVNVLRLFSSADFCNLHCPA

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE6460 Download

>pFN21AE6460  6112 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCCTTCCTGATGCACCTGCTGGTCTGCGTCTT
CGGAATGGGCTCCTGGGTGACCATCAATGGGCTCTGGGTAGAGCTGCCCCTGCTGGTGAT
GGAGCTGCCCGAGGGCTGGTACCTGCCCTCCTACCTCACGGTGGTCATCCAGCTGGCCAA
CATCGGGCCCCTCCTGGTCACCCTGCTCCATCACTTCCGGCCCAGCTGCCTTTCCGAAGT
GCCCATCATCTTCACCCTGCTGGGCGTGGGAACCGTCACCTGCATCATCTTTGCCTTCCT
CTGGAATATGACCTCCTGGGTGCTGGACGGCCACCACAGCATCGCTTTCTTGGTCCTCAC
CTTCTTCCTGGCCCTGGTGGACTGCACCTCTTCAGTGACCTTCCTGCCGTTCATGAGCCG
GCTGCCCACCTACTACCTCACCACCTTCTTTGTGGGTGAAGGACTCAGCGGCCTCTTGCC
CGCCCTGGTGGCTCTTGCCCAGGGCTCCGGTCTCACTACCTGCGTCAATGTCACTGAGAT
ATCAGACAGCGTACCAAGCCCTGTACCCACGAGGGAGACTGACATCGCACAGGGAGTTCC
CAGAGCTTTGGTGTCCGCCCTCCCCGGAATGGAAGCACCCTTGTCCCACCTGGAGAGCCG
CTACCTTCCCGCCCACTTCTCACCCCTGGTCTTCTTCCTCCTCCTATCCATCATGATGGC
CTGCTGCCTCGTGGCGTTCTTTGTCCTCCAGCGTCAACCCAGGTGCTGGGAGGCTTCCGT
GGAAGACCTCCTCAATGACCAGGTCACCCTCCACTCCATCCGGCTGCGGGAAGAGAATGA
CTTGGGCCCTGCAGGCATGGTGGACAGCAGCCAGGGCCAGGGGTATCTAGAGGAGAAAGC
AGCCCCCTGCTGCCCGGCGCACCTGGCCTTCGTCTATACCCTGGTGGCCTTCGTCAACGC
GCTCACCAACGGCATGCTGCCCTCTGTGCAGACCTACTCCTGCCTGTCCTATGGGCCAGT
TGCCTACCACCTGGCTGCCACCCTCAGCATTGTGGCCAACCCTCTTGCCTCGTTGGTCTC
CATGTTCCTGCCTAACAGGTCTCTGCTGTTCCTGGGGGTCCTCTCCGTGCTTGGGACCTG
CTTTGGGGGCTACAACATGGCCATGGCGGTGATGAGCCCCTGCCCCCTCTTGCAGGGCCA
CTGGGGTGGGGAAGTCCTCATTGTGGCCTCGTGGGTGCTTTTCAGCGGCTGCCTCAGCTA
CGTCAAGGTGATGCTGGGCGTGGTCCTGCGCGACCTCAGCCGCAGCGCCCTCTTGTGGTG
CGGGGCGGCGGTGCAGCTGGGCTCGCTGCTCGGAGCGCTGCTCATGTTCCCTCTGGTCAA
CGTGCTGCGGCTCTTCTCGTCCGCGGACTTCTGCAATCTGCACTGTCCAGCCGTTTAAAC
GAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATC
CGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAAC
TAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTT
GGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCT
ATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATT
CATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTC
TACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTC
CAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTC
TACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCT
ATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGA
TAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCC
CTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTG
AAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTC
AACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACT
TTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTC
GGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAG
CATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGAT
AACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTT
TTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAA
GCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGC
AAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATG
GAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATT
GCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCA
GATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGAT
GAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAA
ATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTAT
CCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCA
GGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGC
ATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACC
AGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCG
GATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTA
GGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCG
TTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGAC
ACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAG
GCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTAT
TTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGAT
CCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGC
GCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGT
GGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCT
AGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGG
TGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCT
CTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCG
GGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCG
GTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAG
ATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT